Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 2.7e-208 728.4 364 100.0
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 8.1e-112 407.9 355 56.3
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 4.8e-104 382.1 352 55.7
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 6.2e-104 381.7 342 54.7
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 1.4e-103 380.6 355 54.6
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 6.9e-103 378.3 358 54.7
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 9.0e-103 377.9 347 54.8
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 1.2e-102 377.5 349 53.9
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 1.5e-102 377.1 343 56.9
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 2.0e-102 376.7 357 54.6
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 2.0e-102 376.7 345 56.8
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 2.6e-102 376.3 345 55.1
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 3.4e-102 375.9 344 55.2
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 5.8e-102 375.2 349 54.4
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 9.9e-102 374.4 350 55.4
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 9.9e-102 374.4 335 56.7
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 9.9e-102 374.4 350 53.4
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 1.3e-101 374.0 355 54.1
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 1.3e-101 374.0 354 53.1
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 1.7e-101 373.6 344 54.9
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 2.2e-101 373.2 358 52.5
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 2.9e-101 372.9 341 55.7
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 2.9e-101 372.9 349 56.4
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 3.8e-101 372.5 351 54.1
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 4.9e-101 372.1 350 54.6
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 4.9e-101 372.1 350 55.4
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 6.4e-101 371.7 352 54.5
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 8.4e-101 371.3 350 54.6
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 1.4e-100 370.5 350 54.0
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 3.2e-100 369.4 354 54.0
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 4.2e-100 369.0 348 54.9
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 7.1e-100 368.2 352 53.4
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 7.1e-100 368.2 343 55.4
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 7.1e-100 368.2 350 54.3
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 9.3e-100 367.9 344 54.7
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 9.3e-100 367.9 354 54.0
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 9.3e-100 367.9 350 55.1
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 1.2e-99 367.5 349 53.6
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 2.1e-99 366.7 352 54.3
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 3.5e-99 365.9 350 53.1
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 3.5e-99 365.9 346 53.8
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 6.0e-99 365.2 330 54.8
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 6.0e-99 365.2 334 55.7
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 7.9e-99 364.8 354 53.7
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 7.9e-99 364.8 346 55.5
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 1.0e-98 364.4 346 53.8
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 1.3e-98 364.0 354 53.7
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.3e-98 364.0 354 53.4
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.3e-98 364.0 354 53.4
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 1.3e-98 364.0 339 56.0
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 1.8e-98 363.6 349 53.9
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 2.3e-98 363.2 350 52.9
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 2.3e-98 363.2 349 53.6
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 3.0e-98 362.8 350 53.7
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 3.0e-98 362.8 354 53.7
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 3.0e-98 362.8 352 53.4
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 3.9e-98 362.5 352 55.1
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 3.9e-98 362.5 354 53.1
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 3.9e-98 362.5 352 53.4
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 5.1e-98 362.1 353 53.5
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 6.7e-98 361.7 352 54.0
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 8.7e-98 361.3 347 54.8
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 1.1e-97 360.9 343 52.2
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 1.5e-97 360.5 350 53.7
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 1.9e-97 360.1 348 52.6
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 2.5e-97 359.8 352 55.1
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 3.3e-97 359.4 350 53.4
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 3.3e-97 359.4 355 51.0
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 5.6e-97 358.6 355 51.3
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 1.6e-96 357.1 353 51.8
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 2.8e-96 356.3 354 51.4
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 3.7e-96 355.9 370 51.1
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 1.4e-95 354.0 359 52.6
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 1.8e-95 353.6 347 53.6
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 2.4e-95 353.2 350 52.0
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 2.4e-95 353.2 348 52.3
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 3.1e-95 352.8 357 50.1
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 4.0e-95 352.4 352 52.8
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 6.9e-95 351.7 333 55.6
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 1.2e-94 350.9 353 51.0
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 2.6e-94 349.7 363 50.7
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 3.4e-94 349.4 374 50.8
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 4.5e-94 349.0 329 54.1
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 4.5e-94 349.0 353 52.4
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 1.3e-93 347.4 318 56.6
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 6.4e-93 345.1 355 49.3
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 3.2e-92 342.8 361 49.9
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 3.2e-92 342.8 347 52.2
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 4.2e-92 342.4 347 51.6
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 2.1e-91 340.1 337 52.2
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 3.5e-91 339.3 355 49.3
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 3.5e-91 339.3 339 51.0
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 6.0e-91 338.6 312 53.8
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 1.3e-90 337.4 311 54.0
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 2.3e-90 336.7 333 52.9
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 6.7e-90 335.1 432 44.4
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 7.4e-89 331.6 351 51.3
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 6.2e-88 328.6 355 49.0
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 6.2e-88 328.6 332 53.0
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 5.8e-86 322.0 291 54.0
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 1.0e-85 321.2 350 50.0
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 8.4e-85 318.2 297 55.6
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 2.3e-82 310.1 295 54.6
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 1.9e-81 307.0 393 44.8
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 2.5e-81 306.6 348 48.0
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 4.3e-81 305.8 412 43.9
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 5.7e-81 305.4 302 51.7
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 3.8e-77 292.7 287 53.0
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 6.7e-74 282.0 276 53.3
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 2.6e-70 270.0 261 54.0
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 1.3e-69 267.7 341 44.0
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 2.9e-69 266.5 242 56.2
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 5.5e-68 262.3 438 38.4
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 1.7e-64 250.8 294 48.3
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 3.7e-64 249.6 340 42.9
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 5.9e-62 242.3 252 48.4
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 1.0e-61 241.5 253 48.6
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 1.3e-37 161.4 261 39.8
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.7e-32 144.4 246 37.0
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 4.9e-32 142.9 167 49.7
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 1.3e-29 134.8 219 38.8
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.8e-26 124.4 156 47.4
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 3.4e-25 120.2 156 46.8
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 2.9e-24 117.1 156 45.5
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 5.4e-23 112.8 209 38.3
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 5.4e-23 112.8 108 50.9
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 2.8e-19 100.5 200 36.5
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 1.2e-14 85.1 101 45.5
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 1.2e-14 85.1 70 52.9
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 3.9e-13 80.1 214 28.5
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 8.4e-08 62.4 180 28.9
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 8.4e-08 62.4 62 48.4


User provided reference genes

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