Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0023s0040 Marchantia polymorpha HOM05D007021 ORTHO05D008916 8.9e-103 377.1 212 100.0
AagrBONN_evm.TU.Sc2ySwM_340.579 Anthoceros agrestis HOM05D007021 ORTHO05D008916 7.9e-51 204.5 120 87.5
AagrBONN_evm.TU.Sc2ySwM_117.710 Anthoceros agrestis HOM05D007021 ORTHO05D008916 4.3e-49 198.7 189 64.6
Pp3c5_23310 Physcomitrium patens HOM05D007021 ORTHO05D008916 1.0e-42 177.6 194 60.3
Manes.06G004800 Manihot esculenta HOM05D007021 ORTHO05D008916 3.5e-38 162.5 117 72.6
Potri.015G036500 Populus trichocarpa HOM05D007021 ORTHO05D008916 3.5e-38 162.5 125 65.6
Prupe.5G234700 Prunus persica HOM05D007021 ORTHO05D008916 5.9e-38 161.8 122 65.6
Thecc.03G058600 Theobroma cacao HOM05D007021 ORTHO05D008916 5.9e-38 161.8 132 65.9
MD06G1228200 Malus domestica HOM05D007021 ORTHO05D008916 7.7e-38 161.4 140 59.3
THA.LOC104821829 Tarenaya hassleriana HOM05D007021 ORTHO05D008916 7.7e-38 161.4 152 57.2
Cfa019639 Carpinus fangiana HOM05D007021 ORTHO05D008916 1.7e-37 160.2 136 61.8
Actinidia18882 Actinidia chinensis HOM05D004562 ORTHO05D005435 2.2e-37 159.8 142 59.9
GSVIVG01008459001 Vitis vinifera HOM05D007021 ORTHO05D008916 2.2e-37 159.8 116 68.1
ATR1096G089 Amborella trichopoda HOM05D007021 ORTHO05D008916 3.8e-37 159.1 137 59.9
Gohir.A09G174900 Gossypium hirsutum HOM05D007021 ORTHO05D008916 3.8e-37 159.1 131 64.1
Gohir.D09G170185 Gossypium hirsutum HOM05D007021 ORTHO05D008916 3.8e-37 159.1 131 64.1
Gorai.006G191500 Gossypium raimondii HOM05D007021 ORTHO05D008916 3.8e-37 159.1 131 64.1
CSS0017706 Camellia sinensis var. sinensis HOM05D007021 ORTHO05D008916 5.0e-37 158.7 135 62.2
HPP92_019433 Vanilla planifolia HOM05D007021 ORTHO05D008916 5.0e-37 158.7 115 66.1
arahy.Tifrunner.gnm1.ann1.2FQ1SS Arachis hypogaea HOM05D007021 ORTHO05D008916 6.5e-37 158.3 122 65.6
BcaB06g25855 Brassica carinata HOM05D007021 ORTHO05D008916 6.5e-37 158.3 142 57.7
CANSAT80G0297 Cannabis sativa HOM05D007021 ORTHO05D008916 6.5e-37 158.3 139 57.6
CARHR093260 Cardamine hirsuta HOM05D007021 ORTHO05D008916 6.5e-37 158.3 131 60.3
Gorai.003G035100 Gossypium raimondii HOM05D007021 ORTHO05D008916 8.5e-37 157.9 131 64.1
Glyma.08G055300 Glycine max HOM05D007021 ORTHO05D008916 1.1e-36 157.5 113 68.1
C05p48360 Brassica napus HOM05D007021 ORTHO05D008916 1.5e-36 157.1 142 57.0
SEGI_41594 Sequoiadendron giganteum HOM05D007021 ORTHO05D008916 1.5e-36 157.1 205 53.2
CANSAT80G1746 Cannabis sativa HOM05D007021 ORTHO05D008916 1.9e-36 156.8 139 56.8
Migut.I00268 Erythranthe guttata HOM05D007021 ORTHO05D008916 1.9e-36 156.8 138 58.7
Nn7g37125 Nelumbo nucifera HOM05D007021 ORTHO05D008916 1.9e-36 156.8 113 69.0
Sc04g0004860 Simmondsia chinensis HOM05D007021 ORTHO05D008916 1.9e-36 156.8 139 60.4
COL.COLO4_28897 Corchorus olitorius HOM05D007021 ORTHO05D008916 2.5e-36 156.4 131 61.8
QL10p030610 Quercus lobata HOM05D007021 ORTHO05D008916 2.5e-36 156.4 113 69.0
Gohir.D03G033500 Gossypium hirsutum HOM05D007021 ORTHO05D008916 3.2e-36 156.0 131 62.6
SMO353G0175 Selaginella moellendorffii HOM05D007021 ORTHO05D008916 3.2e-36 156.0 166 53.6
PGR044G2095 Punica granatum HOM05D007021 ORTHO05D008916 4.2e-36 155.6 151 57.0
TWI81G0868 Tripterygium wilfordii HOM05D007021 ORTHO05D008916 4.2e-36 155.6 118 66.1
Thhalv10021570m.g Eutrema salsugineum HOM05D007021 ORTHO05D008916 5.5e-36 155.2 142 56.3
Sabra15G0029900 Salix brachista HOM05D007021 ORTHO05D008916 5.5e-36 155.2 110 70.0
Solyc05g006440.4 Solanum lycopersicum HOM05D007021 ORTHO05D008916 5.5e-36 155.2 117 67.5
Lalb_Chr05g0221591 Lupinus albus HOM05D007021 ORTHO05D008916 9.4e-36 154.5 145 55.9
CiPaw.16G096000 Carya illinoinensis HOM05D007021 ORTHO05D008916 1.2e-35 154.1 123 64.2
Lj4g0002555 Lotus japonicus HOM05D007021 ORTHO05D008916 1.2e-35 154.1 115 67.8
Atru.chr9.1670 Acer truncatum HOM05D007021 ORTHO05D008916 1.6e-35 153.7 114 66.7
Dinv18013 Davidia involucrata HOM05D007021 ORTHO05D008916 1.6e-35 153.7 116 66.4
Glyma.05G246900 Glycine max HOM05D007021 ORTHO05D008916 1.6e-35 153.7 114 65.8
HanXRQChr15g0486591 Helianthus annuus HOM05D007021 ORTHO05D008916 1.6e-35 153.7 214 46.7
Lsat_1_v5_gn_8_115881 Lactuca sativa HOM05D007021 ORTHO05D008916 1.6e-35 153.7 206 47.1
Lj9A418T22 Lonicera japonica HOM05D007021 ORTHO05D008916 1.6e-35 153.7 114 66.7
Sopen05g002370 Solanum pennellii HOM05D007021 ORTHO05D008916 1.6e-35 153.7 117 66.7
MELO3C017374.2 Cucumis melo HOM05D007021 ORTHO05D008916 2.1e-35 153.3 118 65.3
Eucgr.K02276 Eucalyptus grandis HOM05D007021 ORTHO05D008916 2.1e-35 153.3 114 67.5
Sp3g16050 Schrenkiella parvula HOM05D007021 ORTHO05D008916 2.1e-35 153.3 141 56.0
Ciclev10009503m.g Citrus clementina HOM05D007021 ORTHO05D008916 2.7e-35 152.9 117 65.8
Hma1.2p1_0163F.1_g073000 Hydrangea macrophylla HOM05D007021 ORTHO05D008916 2.7e-35 152.9 149 59.1
Rhsim12G0138000 Rhododendron simsii HOM05D007021 ORTHO05D008916 2.7e-35 152.9 115 67.8
VMungo0251G3404 Vigna mungo HOM05D007021 ORTHO05D008916 2.7e-35 152.9 114 67.5
MSTRG.11303 Avicennia marina HOM05D007021 ORTHO05D008916 3.6e-35 152.5 214 45.3
Cpa.g.sc3.381 Carica papaya HOM05D007021 ORTHO05D008916 4.7e-35 152.1 111 69.4
Phvul.002G331000 Phaseolus vulgaris HOM05D007021 ORTHO05D008916 4.7e-35 152.1 114 64.9
TAR623G0728 Trochodendron aralioides HOM05D007021 ORTHO05D008916 4.7e-35 152.1 117 65.0
PGSC0003DMG400022612 Solanum tuberosum HOM05D007021 ORTHO05D008916 1.0e-34 151.0 132 60.6
FAN08G1321 Fragaria x ananassa HOM05D007021 ORTHO05D008916 1.4e-34 150.6 140 57.9
FAN13G1201 Fragaria x ananassa HOM05D007021 ORTHO05D008916 1.4e-34 150.6 119 63.9
Gohir.D08G085600 Gossypium hirsutum HOM05D007021 ORTHO05D008916 1.4e-34 150.6 131 61.8
AL3G31100 Arabidopsis lyrata HOM05D007021 ORTHO05D008916 1.8e-34 150.2 103 71.8
AT3G17930 Arabidopsis thaliana HOM05D007021 ORTHO05D008916 1.8e-34 150.2 103 71.8
BcaC05g28735 Brassica carinata HOM05D007021 ORTHO05D008916 1.8e-34 150.2 107 68.2
A05p31870 Brassica napus HOM05D007021 ORTHO05D008916 1.8e-34 150.2 107 68.2
BolC5t33573H Brassica oleracea HOM05D007021 ORTHO05D008916 1.8e-34 150.2 107 68.2
BraA05t22019Z Brassica rapa HOM05D007021 ORTHO05D008916 1.8e-34 150.2 107 68.2
Cc04_g06110 Coffea canephora HOM05D007021 ORTHO05D008916 1.8e-34 150.2 103 71.8
MBI13_g41749_MAGBIO Magnolia biondii HOM05D007021 ORTHO05D008916 1.8e-34 150.2 111 68.5
Aqoxy1G00082 Aquilegia oxysepala HOM05D007021 ORTHO05D008916 3.0e-34 149.4 172 50.6
Carub.0003s1766 Capsella rubella HOM05D007021 ORTHO05D008916 3.0e-34 149.4 103 70.9
Oeu046158.1 Olea europaea HOM05D007021 ORTHO05D008916 4.0e-34 149.1 105 70.5
unitig_899.g15339 Utricularia gibba HOM05D007021 ORTHO05D008916 4.0e-34 149.1 112 66.1
arahy.Tifrunner.gnm1.ann1.I2I16V Arachis hypogaea HOM05D007021 ORTHO05D008916 5.2e-34 148.7 106 69.8
Nitab4.5_0002312g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 5.2e-34 148.7 145 55.9
Aa31LG8G4800 Aethionema arabicum HOM05D007021 ORTHO05D008916 6.7e-34 148.3 175 49.1
Psat7g001280 Pisum sativum HOM05D007021 ORTHO05D008916 6.7e-34 148.3 106 68.9
Gorai.004G090100 Gossypium raimondii HOM05D007021 ORTHO05D008916 1.1e-33 147.5 121 64.5
Nitab4.5_0004119g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 1.1e-33 147.5 145 55.2
RcHm_v2.0_Chr7g0178211 Rosa chinensis HOM05D007021 ORTHO05D008916 1.1e-33 147.5 120 65.0
TPR.G1394 Trifolium pratense HOM05D007021 ORTHO05D008916 1.5e-33 147.1 115 66.1
CDE04G1339 Ceratophyllum demersum HOM05D000015 ORTHO05D002445 2.0e-33 146.7 108 69.4
CsaV3_1G004470 Cucumis sativus L. HOM05D007021 ORTHO05D008916 2.6e-33 146.4 110 66.4
Sed0001257 Sechium edule HOM05D007021 ORTHO05D008916 3.3e-33 146.0 114 63.2
CAN.G159.4 Capsicum annuum HOM05D007021 ORTHO05D008916 4.4e-33 145.6 103 69.9
Os01g0805200 Oryza sativa ssp. japonica HOM05D007021 ORTHO05D008916 1.7e-32 143.7 194 47.4
ClCG06G014200 Citrullus lanatus HOM05D007021 ORTHO05D008916 2.2e-32 143.3 136 56.6
FvH4_5g17480 Fragaria vesca HOM05D007021 ORTHO05D008916 2.2e-32 143.3 204 46.1
FAN18G1853 Fragaria x ananassa HOM05D007021 ORTHO05D008916 2.2e-32 143.3 204 46.1
ECA232G1431 Erigeron canadensis HOM05D000006 ORTHO05D000091 2.8e-32 142.9 193 45.6
Medtr8g107430 Medicago truncatula HOM05D007021 ORTHO05D008916 3.7e-32 142.5 105 67.6
Haze_18883 Corylus avellana HOM05D007021 ORTHO05D008916 4.8e-32 142.1 133 58.6
Hund08707 Selenicereus undatus HOM05D007021 ORTHO05D008916 8.2e-32 141.4 113 62.8
FAN04G2374 Fragaria x ananassa HOM05D007021 ORTHO05D008916 1.1e-31 141.0 204 45.1
PSO384G2008 Papaver somniferum HOM05D007021 ORTHO05D008916 1.1e-31 141.0 106 67.0
Zm00001eb150510 Zea mays HOM05D007021 ORTHO05D008916 1.1e-31 141.0 201 46.3
PSO339G6055 Papaver somniferum HOM05D007021 ORTHO05D008916 2.0e-30 136.7 167 50.9
EL10Ac8g19152 Beta vulgaris HOM05D007021 ORTHO05D008916 7.7e-30 134.8 114 62.3
CDE07G1635 Ceratophyllum demersum HOM05D007021 ORTHO05D008916 1.3e-29 134.0 94 70.2
CBR_g48186 Chara braunii HOM05D007021 ORTHO05D008916 1.9e-28 130.2 116 59.5
Gohir.1Z049463 Gossypium hirsutum HOM05D007021 ORTHO05D008916 1.2e-27 127.5 131 56.5
Cre01.g000850 Chlamydomonas reinhardtii HOM05D007021 ORTHO05D008916 6.1e-27 125.2 167 47.3
DCAR_014390 Daucus carota HOM05D007021 ORTHO05D008916 5.4e-23 112.1 76 72.4
Peaxi162Scf00828g00016 Petunia axillaris HOM05D007021 ORTHO05D008916 1.3e-21 107.5 76 71.1
Duzib068G0088 Durio zibethinus HOM05D007021 ORTHO05D008916 8.5e-21 104.8 166 42.8
AUR62025165 Chenopodium quinoa HOM05D007021 ORTHO05D008916 3.2e-20 102.8 81 61.7
AUR62029014 Chenopodium quinoa HOM05D007021 ORTHO05D008916 3.2e-20 102.8 81 61.7
MCO16G182 Micromonas commoda HOM05D007021 ORTHO05D008916 8.8e-18 94.7 177 42.4
PRCOL_00000692 Prasinoderma coloniale HOM05D007021 ORTHO05D008916 4.9e-16 89.0 114 41.2
MD14G1237400 Malus domestica HOM05D007021 ORTHO05D008916 2.0e-14 83.6 79 54.4
Oeu010907.1 Olea europaea HOM05D007021 ORTHO05D008916 5.9e-14 82.0 51 74.5


User provided reference genes

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