Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 0.0e+00 2278.8 1140 100.0
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 9.8e-180 635.2 646 54.2
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 6.6e-152 542.7 545 51.9
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 5.4e-130 469.9 851 38.0
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 7.3e-127 459.5 594 44.3
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 1.3e-126 458.8 529 48.0
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 1.6e-126 458.4 514 46.5
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 6.2e-126 456.4 614 44.5
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 3.4e-124 450.7 681 40.8
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 5.8e-124 449.9 518 45.9
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.3e-123 448.7 550 45.6
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 2.2e-123 448.0 516 46.9
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 2.2e-123 448.0 586 44.9
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.1e-122 445.7 550 45.5
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 1.1e-122 445.7 522 47.7
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 2.4e-122 444.5 561 45.8
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 2.4e-122 444.5 622 43.2
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 2.4e-122 444.5 611 43.7
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 3.2e-122 444.1 624 42.6
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 7.1e-122 443.0 569 45.7
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 1.2e-121 442.2 955 35.1
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 2.1e-121 441.4 599 43.6
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 2.1e-121 441.4 566 44.9
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.5e-121 440.7 550 44.2
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 6.0e-121 439.9 969 34.4
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 7.9e-121 439.5 515 47.6
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 1.8e-120 438.3 512 46.9
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 1.8e-120 438.3 513 45.8
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 2.3e-120 438.0 529 46.9
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 3.0e-120 437.6 564 44.3
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 5.1e-120 436.8 561 44.4
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 5.1e-120 436.8 513 45.8
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 6.7e-120 436.4 514 47.3
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.5e-119 435.3 560 44.5
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 1.9e-119 434.9 516 46.3
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 3.3e-119 434.1 516 46.5
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 4.3e-119 433.7 516 46.7
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 4.3e-119 433.7 546 44.7
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 5.6e-119 433.3 519 43.7
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 9.6e-119 432.6 517 46.4
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 9.6e-119 432.6 606 42.4
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 4.8e-118 430.3 551 43.7
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 6.2e-118 429.9 514 46.1
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 6.2e-118 429.9 546 44.7
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 1.4e-117 428.7 575 43.3
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 1.8e-117 428.3 623 43.5
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 1.8e-117 428.3 575 41.9
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 2.4e-117 427.9 575 43.3
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 2.4e-117 427.9 566 43.3
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 2.4e-117 427.9 622 42.3
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 3.1e-117 427.6 587 42.8
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 4.0e-117 427.2 577 44.2
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 6.9e-117 426.4 594 43.1
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 6.9e-117 426.4 578 45.3
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 1.5e-116 425.2 592 43.8
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.5e-116 425.2 598 41.6
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 2.0e-116 424.9 661 40.5
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 3.4e-116 424.1 578 42.7
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 1.0e-115 422.5 520 44.6
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 1.7e-115 421.8 516 45.5
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 1.7e-115 421.8 522 45.2
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 2.9e-115 421.0 983 33.5
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 8.4e-115 419.5 576 42.7
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 8.4e-115 419.5 568 43.5
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 8.4e-115 419.5 528 44.9
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 1.1e-114 419.1 510 46.5
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.1e-114 419.1 672 40.5
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 1.4e-114 418.7 545 44.0
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 3.2e-114 417.5 631 40.4
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 3.2e-114 417.5 487 47.2
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 1.6e-113 415.2 487 47.0
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 2.1e-113 414.8 518 45.2
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 1.8e-112 411.8 511 46.0
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 3.9e-112 410.6 881 34.1
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 2.5e-111 407.9 566 42.0
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 3.3e-111 407.5 523 44.9
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 3.3e-111 407.5 541 43.6
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 1.6e-110 405.2 533 43.3
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 2.1e-110 404.8 941 33.7
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 2.8e-110 404.4 541 44.0
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 2.8e-110 404.4 836 35.3
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 4.8e-110 403.7 659 40.2
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 5.3e-109 400.2 532 44.4
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 5.3e-109 400.2 532 43.6
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 6.9e-109 399.8 533 43.7
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 9.0e-109 399.4 542 43.5
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 1.2e-108 399.1 533 43.7
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 1.2e-108 399.1 578 42.4
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 2.0e-108 398.3 527 44.6
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 3.4e-108 397.5 570 41.4
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 3.4e-108 397.5 489 45.4
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 3.4e-108 397.5 614 39.1
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 5.9e-108 396.7 533 43.7
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 7.6e-108 396.4 848 35.1
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 1.3e-107 395.6 565 41.9
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 5.0e-107 393.7 716 37.6
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.4e-106 392.1 1031 31.5
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 1.9e-106 391.7 528 44.5
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 7.2e-106 389.8 547 41.3
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 5.7e-103 380.2 537 40.0
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 9.7e-103 379.4 484 45.2
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 1.6e-102 378.6 497 42.5
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 5.3e-101 373.6 488 44.3
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 2.8e-94 351.3 479 43.2
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 2.7e-89 334.7 398 47.7
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 3.2e-74 284.6 238 54.6
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 4.1e-69 267.7 793 28.2
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.7e-68 265.0 389 42.2
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 5.9e-68 263.8 408 40.0
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 2.1e-65 255.4 464 39.7
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.5e-58 232.6 591 32.1
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 8.6e-51 206.8 347 36.6
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.3e-43 183.0 359 36.5
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 5.8e-39 167.5 150 54.7
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 7.1e-37 160.6 169 46.2
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 2.6e-31 142.1 183 46.4
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 4.4e-31 141.4 185 47.0
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 9.6e-26 123.6 160 43.1
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 1.6e-17 96.3 297 27.3
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 4.9e-14 84.7 309 23.9
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 3.1e-08 65.5 77 45.5


User provided reference genes

Program Settings