Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0023s0023 Marchantia polymorpha HOM05D006956 ORTHO05D008824 5.4e-78 294.3 150 100.0
AagrBONN_evm.TU.Sc2ySwM_368.712 Anthoceros agrestis HOM05D006956 ORTHO05D008824 8.4e-39 164.1 140 57.9
Pp3c4_6830 Physcomitrium patens HOM05D006956 ORTHO05D008824 1.6e-34 149.8 131 52.7
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 2.8e-34 149.1 128 57.0
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 4.8e-34 148.3 127 55.1
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 6.2e-34 147.9 127 55.1
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 8.1e-34 147.5 127 55.1
Pp3c4_6840 Physcomitrium patens HOM05D006956 ORTHO05D008824 1.4e-33 146.7 127 52.0
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 1.8e-33 146.4 132 56.8
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 1.8e-33 146.4 128 53.1
BolC8t51982H Brassica oleracea HOM05D006956 ORTHO05D008824 3.1e-33 145.6 127 55.1
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 9.0e-33 144.1 128 52.3
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 1.2e-32 143.7 137 50.4
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 2.6e-32 142.5 128 51.6
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 2.6e-32 142.5 128 53.9
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 4.5e-32 141.7 136 55.1
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 4.5e-32 141.7 128 53.1
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 7.6e-32 141.0 127 55.1
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 1.3e-31 140.2 131 52.7
Thecc.07G151600 Theobroma cacao HOM05D006956 ORTHO05D008824 1.3e-31 140.2 127 52.8
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 1.7e-31 139.8 128 52.3
Thhalv10008810m.g Eutrema salsugineum HOM05D006956 ORTHO05D008824 2.2e-31 139.4 127 53.5
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 2.2e-31 139.4 127 52.8
HPP92_011671 Vanilla planifolia HOM05D006956 ORTHO05D008824 2.2e-31 139.4 127 51.2
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 3.8e-31 138.7 131 50.4
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 4.9e-31 138.3 127 51.2
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 1.1e-30 137.1 128 50.0
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 1.4e-30 136.7 127 52.0
Cc05_g16140 Coffea canephora HOM05D006956 ORTHO05D008824 1.9e-30 136.3 141 47.5
MELO3C019670.2 Cucumis melo HOM05D006956 ORTHO05D008824 1.9e-30 136.3 127 51.2
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 2.4e-30 136.0 123 51.2
AT1G16590 Arabidopsis thaliana HOM05D006956 ORTHO05D008824 3.2e-30 135.6 127 51.2
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 3.2e-30 135.6 140 47.1
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 3.2e-30 135.6 140 47.1
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 3.2e-30 135.6 128 52.3
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 4.2e-30 135.2 127 51.2
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 4.2e-30 135.2 139 48.2
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 5.5e-30 134.8 127 50.4
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 5.5e-30 134.8 127 50.4
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 7.1e-30 134.4 123 51.2
Ciclev10022296m.g Citrus clementina HOM05D006956 ORTHO05D008824 9.3e-30 134.0 127 51.2
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 2.7e-29 132.5 128 49.2
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 2.7e-29 132.5 127 49.6
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 3.5e-29 132.1 127 50.4
SMO340G0149 Selaginella moellendorffii HOM05D006956 ORTHO05D008824 4.6e-29 131.7 127 48.8
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 4.6e-29 131.7 139 48.2
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 6.0e-29 131.3 128 50.8
Atru.chr9.1519 Acer truncatum HOM05D006956 ORTHO05D008824 7.9e-29 131.0 135 47.4
CARHR017060 Cardamine hirsuta HOM05D006956 ORTHO05D008824 1.0e-28 130.6 128 49.2
Lj3g0016125 Lotus japonicus HOM05D006956 ORTHO05D008824 1.0e-28 130.6 139 45.3
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 1.3e-28 130.2 121 52.1
Carub.0001s1634 Capsella rubella HOM05D006956 ORTHO05D008824 1.3e-28 130.2 130 50.8
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 1.8e-28 129.8 126 46.8
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 2.3e-28 129.4 127 48.8
Zm00001eb198240 Zea mays HOM05D006956 ORTHO05D008824 5.1e-28 128.3 127 47.2
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 8.7e-28 127.5 127 47.2
Phvul.005G057800 Phaseolus vulgaris HOM05D006956 ORTHO05D008824 8.7e-28 127.5 139 46.0
VMungo1080G0523 Vigna mungo HOM05D006956 ORTHO05D008824 8.7e-28 127.5 139 48.2
Lj3g0018815 Lotus japonicus HOM05D006956 ORTHO05D008824 1.1e-27 127.1 127 48.0
Sabra16G0296900 Salix brachista HOM05D006956 ORTHO05D008824 1.1e-27 127.1 130 46.9
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 1.5e-27 126.7 123 50.4
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 1.5e-27 126.7 127 48.0
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 1.5e-27 126.7 127 47.2
AUR62042418 Chenopodium quinoa HOM05D006956 ORTHO05D008824 1.9e-27 126.3 128 46.1
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 2.5e-27 125.9 126 49.2
Glyma.15G256600 Glycine max HOM05D006956 ORTHO05D008824 4.3e-27 125.2 126 47.6
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 4.3e-27 125.2 131 45.8
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 5.6e-27 124.8 123 48.0
Aa31LG7G1120 Aethionema arabicum HOM05D006956 ORTHO05D008824 7.4e-27 124.4 135 48.1
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 1.6e-26 123.2 127 48.0
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 1.6e-26 123.2 127 48.8
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 2.1e-26 122.9 127 45.7
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 2.8e-26 122.5 127 47.2
ClCG02G018480 Citrullus lanatus HOM05D006956 ORTHO05D008824 3.7e-26 122.1 146 43.2
AUR62026907 Chenopodium quinoa HOM05D006956 ORTHO05D008824 6.2e-26 121.3 129 45.0
Psat1g012040 Pisum sativum HOM05D006956 ORTHO05D008824 8.2e-26 120.9 127 44.9
TPR.G9744 Trifolium pratense HOM05D006956 ORTHO05D008824 8.2e-26 120.9 127 44.1
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 3.1e-25 119.0 131 45.8
PSO210G3417 Papaver somniferum HOM05D006956 ORTHO05D008824 5.3e-25 118.2 126 46.8
PSO223G0077 Papaver somniferum HOM05D006956 ORTHO05D008824 6.9e-25 117.9 127 45.7
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 6.9e-25 117.9 98 56.1
CDE05G1956 Ceratophyllum demersum HOM05D003342 ORTHO05D003861 1.2e-24 117.1 138 43.5
Medtr2g069340 Medicago truncatula HOM05D006956 ORTHO05D008824 1.2e-24 117.1 127 44.1
Sp1g14740 Schrenkiella parvula HOM05D006956 ORTHO05D008824 1.2e-24 117.1 127 48.8
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 1.2e-24 117.1 129 45.0
Lalb_Chr20g0108711 Lupinus albus HOM05D006956 ORTHO05D008824 1.5e-24 116.7 127 44.1
HanXRQChr08g0231891 Helianthus annuus HOM05D006956 ORTHO05D008824 3.4e-24 115.5 124 45.2
FAN11G3326 Fragaria x ananassa HOM05D006956 ORTHO05D008824 4.5e-24 115.2 143 43.4
Actinidia35432 Actinidia chinensis HOM05D006956 ORTHO05D008824 7.6e-24 114.4 136 42.6
arahy.Tifrunner.gnm1.ann1.82TPB7 Arachis hypogaea HOM05D006956 ORTHO05D008824 1.0e-23 114.0 158 39.2
ECA247G3084 Erigeron canadensis HOM05D006956 ORTHO05D008824 1.3e-23 113.6 137 42.3
MBI18_g45405_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 5.1e-20 101.7 92 50.0
Sc08g0007560 Simmondsia chinensis HOM05D006956 ORTHO05D008824 4.5e-16 88.6 91 42.9
Lsat_1_v5_gn_6_63040 Lactuca sativa HOM05D006956 ORTHO05D008824 1.3e-15 87.0 105 41.0
SEGI_37897 Sequoiadendron giganteum HOM05D006956 ORTHO05D008824 4.2e-14 82.0 64 57.8
ATR0753G159 Amborella trichopoda HOM05D006956 ORTHO05D008824 3.6e-13 79.0 95 41.1
Prupe.4G139100 Prunus persica HOM05D006956 ORTHO05D008824 1.8e-12 76.6 129 36.4
Cre13.g575333 Chlamydomonas reinhardtii HOM05D006956 ORTHO05D008824 3.3e-11 72.4 131 35.9
Cpa.g.sc67.70 Carica papaya HOM05D006956 ORTHO05D008824 5.7e-11 71.6 62 51.6
QL04p076191 Quercus lobata HOM05D006956 ORTHO05D008824 3.7e-10 68.9 62 53.2
QL93p0133_0021 Quercus lobata HOM05D006956 ORTHO05D008824 3.7e-10 68.9 62 53.2
FAN16G1261 Fragaria x ananassa HOM05D006956 ORTHO05D008824 8.2e-10 67.8 104 35.6
AagrBONN_evm.TU.Sc2ySwM_362.2804 Anthoceros agrestis HOM05D006956 ORTHO05D008824 1.8e-09 66.6 66 51.5
MD05G1220700 Malus domestica HOM05D006956 ORTHO05D008824 2.4e-09 66.2 81 40.7
Lju41A37T48 Lonicera japonica HOM05D006956 ORTHO05D008824 3.4e-08 62.4 79 41.8
MBI18_g44288_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 1.3e-07 60.5 60 46.7
RcHm_v2.0_Chr5g0026311 Rosa chinensis HOM05D006956 ORTHO05D008824 5.0e-07 58.5 64 43.8


User provided reference genes

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