Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 7.6e-264 913.3 463 100.0
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 1.0e-74 285.0 194 70.6
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 2.9e-74 283.5 208 64.9
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 4.7e-72 276.2 260 56.5
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 3.4e-70 270.0 327 49.2
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 6.1e-64 249.2 257 52.1
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 2.5e-57 227.3 333 41.1
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 1.2e-56 224.9 196 57.1
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 6.1e-56 222.6 195 54.9
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 2.3e-55 220.7 180 58.3
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 2.3e-55 220.7 180 58.3
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 4.0e-55 219.9 195 56.4
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 6.8e-55 219.2 231 49.8
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 8.9e-55 218.8 180 57.2
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 2.0e-54 217.6 266 47.0
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 3.4e-54 216.9 251 47.0
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 3.4e-54 216.9 310 42.3
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 5.7e-54 216.1 233 49.8
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 9.8e-54 215.3 227 48.9
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 9.8e-54 215.3 174 58.6
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 1.3e-53 214.9 291 44.0
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 2.9e-53 213.8 181 57.5
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 2.9e-53 213.8 175 58.3
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 3.7e-53 213.4 314 39.2
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 3.7e-53 213.4 248 47.2
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 3.7e-53 213.4 175 57.7
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 4.9e-53 213.0 248 47.2
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 6.4e-53 212.6 190 55.3
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 8.3e-53 212.2 189 54.5
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 1.1e-52 211.8 190 56.3
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 1.4e-52 211.5 248 45.6
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 1.4e-52 211.5 189 53.4
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 2.4e-52 210.7 174 57.5
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 2.4e-52 210.7 193 52.3
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 2.4e-52 210.7 243 47.7
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 2.4e-52 210.7 188 54.8
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 4.1e-52 209.9 241 48.5
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 4.1e-52 209.9 174 56.9
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 4.1e-52 209.9 161 61.5
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 5.4e-52 209.5 189 52.9
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 7.0e-52 209.1 175 56.6
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 9.2e-52 208.8 186 54.8
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 9.2e-52 208.8 203 52.2
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 9.2e-52 208.8 249 45.0
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 9.2e-52 208.8 164 59.1
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 1.6e-51 208.0 238 48.3
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 1.6e-51 208.0 189 56.6
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 1.6e-51 208.0 265 45.7
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 2.0e-51 207.6 225 49.3
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 2.0e-51 207.6 144 65.3
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 2.0e-51 207.6 276 44.2
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 2.0e-51 207.6 189 52.4
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 2.7e-51 207.2 174 58.0
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 2.7e-51 207.2 216 48.6
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 3.5e-51 206.8 169 57.4
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 3.5e-51 206.8 174 55.2
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 3.5e-51 206.8 269 43.5
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 3.5e-51 206.8 230 47.8
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 3.5e-51 206.8 278 42.4
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 4.6e-51 206.5 239 48.1
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 4.6e-51 206.5 240 45.0
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 5.9e-51 206.1 178 55.1
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 5.9e-51 206.1 217 49.8
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 7.8e-51 205.7 172 57.6
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 7.8e-51 205.7 297 42.1
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 7.8e-51 205.7 226 49.6
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 7.8e-51 205.7 164 59.1
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 7.8e-51 205.7 231 47.6
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 1.0e-50 205.3 249 44.2
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 1.0e-50 205.3 314 39.5
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 1.3e-50 204.9 179 53.1
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 1.3e-50 204.9 261 45.6
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.3e-50 204.9 242 45.5
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 1.3e-50 204.9 226 49.1
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 1.3e-50 204.9 324 39.2
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 1.7e-50 204.5 178 53.9
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 1.7e-50 204.5 178 53.9
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 1.7e-50 204.5 232 48.3
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 1.7e-50 204.5 226 48.7
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 2.3e-50 204.1 228 48.2
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 2.3e-50 204.1 178 53.4
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 2.3e-50 204.1 178 53.4
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 3.0e-50 203.8 230 47.8
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 3.0e-50 203.8 245 44.1
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 3.0e-50 203.8 253 45.1
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 3.9e-50 203.4 210 50.5
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 5.0e-50 203.0 305 39.0
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 6.6e-50 202.6 256 44.1
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 6.6e-50 202.6 191 53.9
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 8.6e-50 202.2 215 50.2
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 8.6e-50 202.2 262 44.7
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 8.6e-50 202.2 254 45.7
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 8.6e-50 202.2 247 48.6
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 1.1e-49 201.8 150 62.0
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 1.1e-49 201.8 189 55.0
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 1.5e-49 201.4 331 37.8
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 1.9e-49 201.1 273 42.5
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.9e-49 201.1 314 39.8
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 3.3e-49 200.3 144 63.2
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 3.3e-49 200.3 273 44.0
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 4.3e-49 199.9 216 47.2
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 7.3e-49 199.1 255 45.1
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 9.5e-49 198.7 239 47.3
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 9.5e-49 198.7 186 51.6
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 1.2e-48 198.4 317 38.5
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 1.2e-48 198.4 181 55.2
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 2.8e-48 197.2 231 47.6
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 2.8e-48 197.2 214 48.6
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 6.2e-48 196.1 303 38.3
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 1.8e-47 194.5 151 61.6
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 5.2e-47 193.0 293 39.9
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 2.6e-46 190.7 287 41.8
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 1.1e-44 185.3 190 48.4
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 2.4e-44 184.1 152 57.9
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 5.6e-41 172.9 306 37.6
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 3.6e-40 170.2 283 37.8
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 7.5e-38 162.5 118 64.4
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 1.6e-32 144.8 116 56.9
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 3.2e-20 104.0 66 65.2
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 9.3e-20 102.4 79 57.0
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 6.0e-11 73.2 62 56.5
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 5.6e-09 66.6 57 49.1


User provided reference genes

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