Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0022s0066 Marchantia polymorpha HOM05D040848 ORTHO05D010190 5.5e-275 950.3 460 100.0
Mapoly0006s0116 Marchantia polymorpha HOM05D002809 ORTHO05D010190 2.1e-56 224.2 438 32.6
Mapoly0022s0065 Marchantia polymorpha HOM05D040848 ORTHO05D010190 8.3e-37 159.1 377 31.6
Mapoly0063s0068 Marchantia polymorpha HOM05D008342 ORTHO05D010190 9.2e-28 129.0 287 32.8
Mapoly0004s0242 Marchantia polymorpha HOM05D002809 ORTHO05D010190 1.9e-25 121.3 383 26.4
Mapoly0006s0115 Marchantia polymorpha HOM05D002809 ORTHO05D010190 2.3e-18 97.8 376 25.3
Mapoly0138s0031 Marchantia polymorpha HOM05D002809 ORTHO05D010190 1.5e-17 95.1 345 25.2
Mapoly0085s0028 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.3e-17 94.0 367 24.8
Mapoly0085s0027 Marchantia polymorpha HOM05D008342 ORTHO05D010190 5.6e-17 93.2 294 27.2
Pp3c3_32280 Physcomitrium patens HOM05D002809 ORTHO05D004563 4.4e-14 83.6 349 24.6
Mapoly0001s0182 Marchantia polymorpha HOM05D002809 ORTHO05D010190 7.5e-14 82.8 293 23.9
Pp3c10_20160 Physcomitrium patens HOM05D003005 ORTHO05D004563 1.3e-13 82.0 353 24.9
Mapoly0144s0012 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.5e-11 73.9 222 26.1
Mapoly0066s0028 Marchantia polymorpha HOM05D015438 ORTHO05D018027 7.8e-11 72.8 342 24.6
Mapoly0001s0051 Marchantia polymorpha HOM05D003005 ORTHO05D010190 1.7e-10 71.6 240 27.9
COL.COLO4_24613 Corchorus olitorius HOM05D000007 ORTHO05D000017 5.1e-10 70.1 278 23.7
Mapoly0021s0113 Marchantia polymorpha HOM05D015438 ORTHO05D018027 5.1e-10 70.1 214 26.2
Mapoly0170s0023 Marchantia polymorpha HOM05D002809 ORTHO05D004563 8.6e-10 69.3 285 26.0
HanXRQChr12g0357331 Helianthus annuus HOM05D005076 ORTHO05D004974 4.3e-09 67.0 185 26.5
Mapoly0001s0513 Marchantia polymorpha HOM05D008342 ORTHO05D010190 9.5e-09 65.9 215 25.6
RcHm_v2.0_Chr2g0109781 Rosa chinensis HOM05D000007 ORTHO05D000017 4.7e-08 63.5 224 24.6
FAN03G2025 Fragaria x ananassa HOM05D000007 ORTHO05D000017 6.2e-08 63.2 146 30.8
FAN06G4529 Fragaria x ananassa HOM05D000007 ORTHO05D000017 8.1e-08 62.8 146 30.8
Migut.H02131 Erythranthe guttata HOM05D000007 ORTHO05D000039 1.1e-07 62.4 164 28.7
FvH4_7g09840 Fragaria vesca HOM05D000007 ORTHO05D000017 1.4e-07 62.0 145 30.3
RcHm_v2.0_Chr5g0030151 Rosa chinensis HOM05D000007 ORTHO05D000017 1.4e-07 62.0 148 30.4
SGA_v2.0_scaffold110G31296 Striga asiatica HOM05D000007 ORTHO05D000017 1.4e-07 62.0 208 26.4
Oeu028341.1 Olea europaea HOM05D000007 ORTHO05D000039 1.8e-07 61.6 199 27.1
EL10Ac5g12264 Beta vulgaris HOM05D000007 ORTHO05D000017 2.4e-07 61.2 190 29.5
Migut.M00314 Erythranthe guttata HOM05D000007 ORTHO05D000039 2.4e-07 61.2 211 27.5
Mapoly0304s0003 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.4e-07 61.2 257 25.3
FAN06G4396 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.0e-07 60.5 145 29.7
Oeu025157.1 Olea europaea HOM05D000007 ORTHO05D000039 4.0e-07 60.5 194 27.8
Migut.M00304 Erythranthe guttata HOM05D000007 ORTHO05D000039 5.2e-07 60.1 129 30.2
Pp3c9_20230 Physcomitrium patens HOM05D004302 ORTHO05D009385 5.2e-07 60.1 264 25.4
Manes.01G127300 Manihot esculenta HOM05D000007 ORTHO05D000017 8.9e-07 59.3 182 27.5
FvH4_3g18082 Fragaria vesca HOM05D000007 ORTHO05D000017 1.2e-06 58.9 186 26.9
FAN16G3618 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.2e-06 58.9 186 26.9
Mapoly0003s0241 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.2e-06 58.9 279 22.9
COL.COLO4_20207 Corchorus olitorius HOM05D000007 ORTHO05D000017 1.5e-06 58.5 220 23.2
MBI07_g18750_MAGBIO Magnolia biondii HOM05D002809 ORTHO05D004563 2.0e-06 58.2 329 23.1
Manes.03G145200 Manihot esculenta HOM05D000007 ORTHO05D000017 2.0e-06 58.2 211 27.0
Manes.15G021200 Manihot esculenta HOM05D000007 ORTHO05D000017 2.0e-06 58.2 205 23.9
Mapoly0041s0107 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.0e-06 58.2 270 22.6
RcHm_v2.0_Chr7g0203691 Rosa chinensis HOM05D000007 ORTHO05D000017 2.0e-06 58.2 124 32.3
SalBow1G0678 Salvia bowleyana HOM05D000007 ORTHO05D000017 2.6e-06 57.8 159 28.9
COL.COLO4_31895 Corchorus olitorius HOM05D000007 ORTHO05D000017 3.4e-06 57.4 208 27.4
ECA247G0796 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.4e-06 57.4 129 28.7
Mapoly0022s0079 Marchantia polymorpha HOM05D042692 ORTHO05D010190 3.4e-06 57.4 304 24.0
PSO675G8790 Papaver somniferum HOM05D000007 ORTHO05D000017 3.4e-06 57.4 219 23.7
CiPaw.07G037900 Carya illinoinensis HOM05D000007 ORTHO05D000017 4.4e-06 57.0 151 28.5
AUR62014647 Chenopodium quinoa HOM05D000007 ORTHO05D000017 4.4e-06 57.0 211 26.5
FAN11G3601 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.4e-06 57.0 197 25.9
FAN16G2717 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.4e-06 57.0 202 24.3
DCAR_012932 Daucus carota HOM05D000007 ORTHO05D013591 5.8e-06 56.6 171 29.8
Dinv12703 Davidia involucrata HOM05D000007 ORTHO05D000039 5.8e-06 56.6 216 25.5
Duzib213G0407 Durio zibethinus HOM05D000007 ORTHO05D000017 5.8e-06 56.6 205 25.9
Nitab4.5_0000249g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 5.8e-06 56.6 168 32.1
vmacro12417 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 5.8e-06 56.6 170 29.4
Migut.M00317 Erythranthe guttata HOM05D000007 ORTHO05D000039 7.6e-06 56.2 211 26.5
HanXRQChr12g0357601 Helianthus annuus HOM05D005076 ORTHO05D004974 7.6e-06 56.2 121 28.9
arahy.Tifrunner.gnm1.ann1.IX2ZXQ Arachis hypogaea HOM05D000007 ORTHO05D000017 9.9e-06 55.8 134 30.6
CiPaw.07G037700 Carya illinoinensis HOM05D000007 ORTHO05D000017 9.9e-06 55.8 212 24.1
Migut.H00816 Erythranthe guttata HOM05D000007 ORTHO05D000017 9.9e-06 55.8 219 22.4
Thecc.04G270600 Theobroma cacao HOM05D000007 ORTHO05D000017 9.9e-06 55.8 212 25.5


User provided reference genes

Program Settings