Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0021s0150 Marchantia polymorpha HOM05D004701 ORTHO05D005220 0.0e+00 1363.2 682 100.0
Pp3c17_15290 Physcomitrium patens HOM05D004701 ORTHO05D005220 2.5e-138 496.9 601 44.6
Aqoxy3G03462 Aquilegia oxysepala HOM05D004701 ORTHO05D005220 5.5e-130 469.2 610 41.5
Duzib205G0738 Durio zibethinus HOM05D004701 ORTHO05D005220 8.9e-128 461.8 641 40.9
Gorai.003G098100 Gossypium raimondii HOM05D004701 ORTHO05D005220 2.0e-127 460.7 654 39.4
PGR083G0417 Punica granatum HOM05D004701 ORTHO05D005220 3.4e-127 459.9 607 40.4
TAR629G3124 Trochodendron aralioides HOM05D004701 ORTHO05D005220 3.4e-127 459.9 653 39.1
Gohir.D03G094000 Gossypium hirsutum HOM05D004701 ORTHO05D005220 3.7e-126 456.4 651 39.8
CiPaw.12G011900 Carya illinoinensis HOM05D004701 ORTHO05D005220 8.3e-126 455.3 654 40.2
Cfa018922 Carpinus fangiana HOM05D004701 ORTHO05D005220 1.8e-125 454.1 656 39.2
Gohir.A03G067500 Gossypium hirsutum HOM05D004701 ORTHO05D005220 1.8e-125 454.1 624 40.5
AagrBONN_evm.TU.Sc2ySwM_344.3797 Anthoceros agrestis HOM05D004701 ORTHO05D005220 2.4e-125 453.8 515 45.4
QL10p017494 Quercus lobata HOM05D004701 ORTHO05D005220 1.2e-124 451.4 654 39.6
MD06G1196700 Malus domestica HOM05D004701 ORTHO05D005220 1.6e-124 451.1 614 41.0
GSVIVG01007980001 Vitis vinifera HOM05D004701 ORTHO05D005220 1.6e-124 451.1 651 39.3
Atru.chr9.198 Acer truncatum HOM05D004701 ORTHO05D005220 2.0e-124 450.7 607 39.9
Thecc.03G092900 Theobroma cacao HOM05D004701 ORTHO05D005220 2.0e-124 450.7 625 39.8
ATR0564G073 Amborella trichopoda HOM05D004701 ORTHO05D005220 4.5e-124 449.5 615 41.5
Nn4g23237 Nelumbo nucifera HOM05D004701 ORTHO05D005220 7.8e-124 448.7 617 39.5
PSO832G0806 Papaver somniferum HOM05D004701 ORTHO05D005220 1.0e-123 448.4 595 41.5
Ciclev10019092m.g Citrus clementina HOM05D004701 ORTHO05D005220 1.3e-123 448.0 635 38.9
Prupe.5G196200 Prunus persica HOM05D004701 ORTHO05D005220 1.9e-122 444.1 657 40.8
SalBow5G2872 Salvia bowleyana HOM05D004701 ORTHO05D005220 1.6e-121 441.0 603 41.3
CANSAT80G1745 Cannabis sativa HOM05D004701 ORTHO05D005220 3.6e-121 439.9 610 39.5
CsaV3_1G002500 Cucumis sativus L. HOM05D004701 ORTHO05D005220 3.6e-121 439.9 625 39.7
Sp1g16680 Schrenkiella parvula HOM05D004701 ORTHO05D005220 6.1e-121 439.1 632 39.6
Duzib068G0813 Durio zibethinus HOM05D004701 ORTHO05D005220 8.0e-121 438.7 627 39.6
Dinv38737 Davidia involucrata HOM05D004701 ORTHO05D005220 3.1e-120 436.8 626 39.0
Eucgr.B00530 Eucalyptus grandis HOM05D004701 ORTHO05D005220 3.1e-120 436.8 605 41.0
FvH4_5g14650 Fragaria vesca HOM05D004701 ORTHO05D005220 6.8e-120 435.6 602 41.0
Solyc03g115840.4 Solanum lycopersicum HOM05D004701 ORTHO05D005220 5.8e-119 432.6 638 38.2
Lsat_1_v5_gn_5_21460 Lactuca sativa HOM05D004701 ORTHO05D005220 9.8e-119 431.8 589 38.4
TWI81G0545 Tripterygium wilfordii HOM05D004701 ORTHO05D005220 9.8e-119 431.8 649 39.1
Potri.017G112200 Populus trichocarpa HOM05D004701 ORTHO05D005220 1.3e-118 431.4 659 37.6
Sed0001989 Sechium edule HOM05D004701 ORTHO05D005220 1.3e-118 431.4 605 39.3
MELO3C017186.2 Cucumis melo HOM05D004701 ORTHO05D005220 3.2e-117 426.8 606 39.3
BcaC07g41307 Brassica carinata HOM05D004701 ORTHO05D005220 7.0e-117 425.6 593 39.3
Lj1g0024661 Lotus japonicus HOM05D004701 ORTHO05D005220 7.0e-117 425.6 652 38.8
Manes.14G080700 Manihot esculenta HOM05D004701 ORTHO05D005220 9.2e-117 425.2 630 39.2
BcaB03g14489 Brassica carinata HOM05D004701 ORTHO05D005220 1.6e-116 424.5 618 38.5
Sabra17G0093000 Salix brachista HOM05D004701 ORTHO05D005220 1.6e-116 424.5 622 39.2
Carub.0001s1833 Capsella rubella HOM05D004701 ORTHO05D005220 2.7e-116 423.7 606 40.1
RcHm_v2.0_Chr7g0181841 Rosa chinensis HOM05D004701 ORTHO05D005220 3.5e-116 423.3 621 39.9
AT1G18700 Arabidopsis thaliana HOM05D004701 ORTHO05D005220 7.8e-116 422.2 613 39.3
AL1G31150 Arabidopsis lyrata HOM05D004701 ORTHO05D005220 1.0e-115 421.8 613 39.6
Thhalv10006967m.g Eutrema salsugineum HOM05D004701 ORTHO05D005220 1.0e-115 421.8 585 39.3
THA.LOC104808258 Tarenaya hassleriana HOM05D004701 ORTHO05D005220 1.0e-115 421.8 609 39.2
HanXRQChr05g0154901 Helianthus annuus HOM05D004701 ORTHO05D005220 1.7e-115 421.0 651 36.7
C08p43140 Brassica napus HOM05D004701 ORTHO05D005220 3.0e-115 420.2 597 38.9
Lalb_Chr08g0235571 Lupinus albus HOM05D004701 ORTHO05D005220 3.9e-115 419.9 622 38.3
A09p59760 Brassica napus HOM05D004701 ORTHO05D005220 8.6e-115 418.7 633 37.6
ECA246G0122 Erigeron canadensis HOM05D004701 ORTHO05D005220 2.5e-114 417.2 597 38.4
Migut.I00201 Erythranthe guttata HOM05D004701 ORTHO05D005220 5.6e-114 416.0 638 37.8
FAN08G0610 Fragaria x ananassa HOM05D004701 ORTHO05D005220 7.3e-114 415.6 667 37.8
FAN18G0140 Fragaria x ananassa HOM05D004701 ORTHO05D005220 1.6e-113 414.5 628 39.2
Medtr3g435140 Medicago truncatula HOM05D004701 ORTHO05D005220 2.1e-113 414.1 659 37.0
Hund02633 Selenicereus undatus HOM05D004701 ORTHO05D005220 3.1e-112 410.2 617 39.2
Glyma.06G195700 Glycine max HOM05D004701 ORTHO05D005220 4.0e-112 409.8 657 36.7
Peaxi162Scf00274g00452 Petunia axillaris HOM05D004701 ORTHO05D005220 2.0e-111 407.5 603 38.1
VMungo1309G2345 Vigna mungo HOM05D004701 ORTHO05D005220 4.4e-111 406.4 658 36.8
Nitab4.5_0005900g0110 Nicotiana tabacum HOM05D004701 ORTHO05D005220 9.8e-111 405.2 618 37.1
Phvul.009G185900 Phaseolus vulgaris HOM05D004701 ORTHO05D005220 1.3e-110 404.8 663 35.7
Sc12g0006470 Simmondsia chinensis HOM05D004701 ORTHO05D005220 1.7e-110 404.4 623 40.1
Lj4g0017943 Lotus japonicus HOM05D004701 ORTHO05D005220 2.2e-110 404.1 611 38.3
CAN.G479.72 Capsicum annuum HOM05D004701 ORTHO05D005220 4.9e-110 402.9 628 38.1
Cc00_g08370 Coffea canephora HOM05D004701 ORTHO05D005220 1.1e-109 401.7 542 41.9
Os07g0632600 Oryza sativa ssp. japonica HOM05D004701 ORTHO05D005220 1.1e-109 401.7 635 38.1
Aa31LG7G3460 Aethionema arabicum HOM05D004701 ORTHO05D005220 1.4e-109 401.4 665 36.2
Rhsim08G0152800 Rhododendron simsii HOM05D004701 ORTHO05D005220 1.4e-109 401.4 661 37.1
arahy.Tifrunner.gnm1.ann1.00I77L Arachis hypogaea HOM05D004701 ORTHO05D005220 1.9e-109 401.0 627 36.7
PSO063G2323 Papaver somniferum HOM05D004701 ORTHO05D005220 1.9e-109 401.0 608 38.0
Zm00001eb110080 Zea mays HOM05D004701 ORTHO05D005220 1.7e-107 394.4 552 39.7
EL10Ac5g11047 Beta vulgaris HOM05D004701 ORTHO05D005220 5.1e-107 392.9 626 37.9
TPR.G11816 Trifolium pratense HOM05D004701 ORTHO05D005220 8.6e-107 392.1 651 34.7
arahy.Tifrunner.gnm1.ann1.UQ68S4 Arachis hypogaea HOM05D004701 ORTHO05D005220 1.5e-106 391.3 604 37.6
CDE02G4120 Ceratophyllum demersum HOM05D004701 ORTHO05D005220 2.8e-105 387.1 412 47.8
Nitab4.5_0001211g0300 Nicotiana tabacum HOM05D004701 ORTHO05D005220 8.1e-105 385.6 609 36.8
CSS0010493 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 2.3e-104 384.0 557 39.5
CSS0005828 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 5.2e-104 382.9 647 37.6
FAN13G1597 Fragaria x ananassa HOM05D004701 ORTHO05D005220 8.6e-99 365.5 621 37.5
BraA09t41353Z Brassica rapa HOM05D004701 ORTHO05D005220 1.9e-98 364.4 609 35.8
Haze_07305 Corylus avellana HOM05D004701 ORTHO05D005220 3.6e-97 360.1 732 33.6
vmacro17562 Vaccinium macrocarpon HOM05D004701 ORTHO05D005220 6.2e-97 359.4 687 33.9
BolC8t51869H Brassica oleracea HOM05D004701 ORTHO05D005220 8.1e-97 359.0 601 35.8
Psat5g195480 Pisum sativum HOM05D004701 ORTHO05D005220 2.9e-94 350.5 620 33.5
Sopen03g034820 Solanum pennellii HOM05D004701 ORTHO05D005220 1.7e-91 341.3 432 41.7
AUR62021651 Chenopodium quinoa HOM05D004701 ORTHO05D005220 1.1e-90 338.6 639 34.4
Lj2g0020469 Lotus japonicus HOM05D004701 ORTHO05D005220 4.3e-90 336.7 566 34.8
AUR62008439 Chenopodium quinoa HOM05D004701 ORTHO05D005220 2.1e-89 334.3 670 34.2
Ah.11g048260 Amaranthus hybridus HOM05D004701 ORTHO05D005220 2.6e-87 327.4 587 34.6
COL.COLO4_36922 Corchorus olitorius HOM05D004701 ORTHO05D005220 1.7e-86 324.7 613 34.1
SMO117G0311 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.4e-85 320.9 349 45.0
MBI02_g20482_MAGBIO Magnolia biondii HOM05D004701 ORTHO05D005220 6.0e-84 316.2 332 48.5
Lj5A108G55 Lonicera japonica HOM05D004701 ORTHO05D005220 4.0e-80 303.5 437 39.8
TAR629G0729 Trochodendron aralioides HOM05D004701 ORTHO05D005220 1.5e-79 301.6 410 40.2
HPP92_019783 Vanilla planifolia HOM05D004701 ORTHO05D005220 1.8e-75 288.1 618 30.9
ClCG06G016050 Citrullus lanatus HOM05D004701 ORTHO05D005220 3.7e-73 280.4 424 38.4
Actinidia04876 Actinidia chinensis HOM05D004701 ORTHO05D005220 2.1e-68 264.6 349 40.7
CARHR019320 Cardamine hirsuta HOM05D004701 ORTHO05D005220 1.2e-63 248.8 261 46.4
SMO286G0020 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 6.1e-60 236.5 330 38.5
DCAR_010367 Daucus carota HOM05D004701 ORTHO05D005220 8.2e-57 226.1 627 28.7
SMO274G0023 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.4e-43 182.2 329 32.2
SMO274G0026 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.8e-41 174.5 340 32.1
SMO240G0047 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 4.1e-40 170.6 318 34.0
MD14G1203500 Malus domestica HOM05D004701 ORTHO05D005220 7.0e-40 169.9 282 37.6
SMO202G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 6.1e-36 156.8 185 43.2
SMO183G0003 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 6.7e-35 153.3 328 31.1
SMO364G0054 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 3.3e-34 151.0 193 39.9
SMO122G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 7.5e-34 149.8 326 29.4
MD14G1203400 Malus domestica HOM05D004701 ORTHO05D005220 3.1e-32 144.4 179 44.7
Cpa.g.sc341.2 Carica papaya HOM05D004701 ORTHO05D005220 1.3e-30 139.0 212 39.6
SEGI_05265 Sequoiadendron giganteum HOM05D004701 ORTHO05D005220 5.0e-30 137.1 171 43.9
SMO274G0004 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 8.5e-30 136.3 362 27.9
AagrBONN_evm.TU.Sc2ySwM_344.2753 Anthoceros agrestis HOM05D004701 ORTHO05D005220 7.2e-29 133.3 404 29.2
Cre02.g118450 Chlamydomonas reinhardtii HOM05D004701 ORTHO05D005220 7.2e-29 133.3 496 25.0
PRCOL_00003726 Prasinoderma coloniale HOM05D004701 ORTHO05D005220 3.6e-28 131.0 436 25.0
PGSC0003DMG400019522 Solanum tuberosum HOM05D004701 ORTHO05D005220 4.7e-28 130.6 230 33.5
SMO077G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.0e-27 129.4 215 33.0
Oeu052445.1 Olea europaea HOM05D004701 ORTHO05D005220 1.8e-27 128.6 253 31.6
SMO274G0001 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 4.0e-27 127.5 247 34.4
HPP92_019730 Vanilla planifolia HOM05D004701 ORTHO05D005220 3.4e-26 124.4 360 25.3
Actinidia04875 Actinidia chinensis HOM05D004701 ORTHO05D005220 4.4e-26 124.0 269 31.6
AagrBONN_evm.TU.Sc2ySwM_344.2754 Anthoceros agrestis HOM05D004701 ORTHO05D005220 7.7e-23 113.2 168 35.7
SEGI_06018 Sequoiadendron giganteum HOM05D004701 ORTHO05D005220 8.5e-22 109.8 172 34.3
SMO212G0008 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 4.2e-21 107.5 134 41.0
SMO077G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.1e-20 105.1 189 34.4
Cpa.g.c36787.2 Carica papaya HOM05D004701 ORTHO05D005220 4.4e-18 97.4 87 48.3
SMO032G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.6e-15 89.0 175 33.1
Ca_14652_v3 Cicer arietinum L. HOM05D004701 ORTHO05D005220 2.7e-15 88.2 222 27.9
Sopen03g034830 Solanum pennellii HOM05D004701 ORTHO05D005220 1.5e-13 82.4 187 28.9
CSS0033275 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 9.5e-13 79.7 192 30.2
Ca_14653_v3 Cicer arietinum L. HOM05D004701 ORTHO05D005220 1.0e-11 76.3 228 29.8
SMO286G0021 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.4e-11 75.9 171 29.2
Lsat_1_v5_gn_3_76880 Lactuca sativa HOM05D005083 ORTHO05D006310 5.2e-11 73.9 98 42.9
Cc00_g08360 Coffea canephora HOM05D004701 ORTHO05D005220 1.8e-08 65.5 130 33.8
SMO009G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.8e-08 65.5 217 28.1
Hma1.2p1_0060F.1_g033570 Hydrangea macrophylla HOM05D004701 ORTHO05D005220 1.6e-07 62.4 125 29.6
Haze_06052 Corylus avellana HOM05D022078 ORTHO05D024871 2.0e-07 62.0 57 52.6
MD14G1127800 Malus domestica HOM05D004701 ORTHO05D005220 4.6e-07 60.8 75 44.0


User provided reference genes

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