Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 0.0e+00 1538.5 793 100.0
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 1.1e-209 734.2 633 60.5
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 2.7e-205 719.5 729 53.1
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 3.7e-186 656.0 654 54.7
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 3.7e-186 656.0 654 54.7
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 6.3e-186 655.2 654 55.0
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 6.3e-186 655.2 657 55.1
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 6.3e-186 655.2 657 55.1
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 1.4e-185 654.1 670 54.2
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 1.4e-185 654.1 616 56.5
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 5.4e-185 652.1 669 53.4
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 5.4e-185 652.1 654 54.3
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 7.0e-185 651.7 653 53.8
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 9.2e-185 651.4 670 53.7
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 3.5e-184 649.4 654 54.1
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 4.5e-184 649.0 669 52.5
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 5.9e-184 648.7 670 53.7
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 1.0e-183 647.9 659 52.8
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 1.3e-183 647.5 684 51.9
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 3.9e-183 646.0 668 51.8
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 5.0e-183 645.6 673 52.5
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 8.6e-183 644.8 670 53.4
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 2.5e-182 643.3 673 53.3
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 1.6e-181 640.6 651 53.8
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 1.6e-181 640.6 640 54.8
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 2.1e-181 640.2 654 52.4
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 2.1e-181 640.2 624 56.1
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 2.1e-181 640.2 654 52.1
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 2.8e-181 639.8 653 52.7
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 4.7e-181 639.0 618 55.7
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 4.7e-181 639.0 654 53.2
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 6.1e-181 638.6 664 52.0
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 1.0e-180 637.9 655 52.2
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 1.4e-180 637.5 672 52.1
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 1.8e-180 637.1 655 52.2
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 1.8e-180 637.1 656 53.8
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 3.1e-180 636.3 658 52.6
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 3.1e-180 636.3 666 53.3
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 3.1e-180 636.3 666 53.2
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 8.9e-180 634.8 657 53.4
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 1.2e-179 634.4 662 52.3
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 1.2e-179 634.4 631 54.5
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 1.2e-179 634.4 652 52.5
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 1.5e-179 634.0 632 55.1
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 2.0e-179 633.6 658 53.5
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 2.6e-179 633.3 678 51.8
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 3.4e-179 632.9 651 53.9
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 3.4e-179 632.9 652 52.6
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 4.4e-179 632.5 655 52.2
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 7.5e-179 631.7 651 52.7
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 9.8e-179 631.3 655 53.1
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 3.7e-178 629.4 656 52.6
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 4.9e-178 629.0 661 53.1
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 6.4e-178 628.6 696 51.7
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 1.1e-177 627.9 652 52.5
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 1.1e-177 627.9 656 52.6
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 2.4e-177 626.7 653 51.9
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 3.2e-177 626.3 656 53.0
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 3.2e-177 626.3 653 51.9
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 5.4e-177 625.5 653 51.5
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 5.4e-177 625.5 666 52.1
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 5.4e-177 625.5 652 52.8
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 1.6e-176 624.0 712 50.6
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 2.7e-176 623.2 656 53.0
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 2.7e-176 623.2 656 53.0
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 3.5e-176 622.9 654 52.6
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 1.7e-175 620.5 651 52.2
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 3.0e-175 619.8 579 56.3
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 6.6e-175 618.6 654 51.2
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 1.5e-174 617.5 656 52.4
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 1.2e-173 614.4 652 53.8
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 1.6e-173 614.0 699 49.5
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 2.1e-173 613.6 669 51.0
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 2.1e-173 613.6 651 51.3
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 2.8e-173 613.2 651 51.3
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 3.6e-173 612.8 680 49.9
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 1.1e-172 611.3 688 51.2
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 1.8e-172 610.5 597 53.8
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 2.3e-172 610.1 652 51.5
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 2.3e-172 610.1 650 51.5
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 7.5e-171 605.1 670 50.1
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 4.9e-170 602.4 685 50.1
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.3e-167 594.3 665 50.8
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 3.0e-167 593.2 621 53.1
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 2.1e-165 587.0 573 54.5
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 2.8e-165 586.6 653 51.1
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 1.2e-163 581.3 714 47.1
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 3.2e-161 573.2 623 50.6
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 3.3e-158 563.1 602 52.7
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 1.2e-155 554.7 619 50.6
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 2.1e-152 543.9 598 49.8
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 1.9e-150 537.3 584 50.5
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 1.8e-148 530.8 588 50.5
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 5.6e-142 509.2 710 44.8
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 3.4e-139 500.0 548 50.5
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 2.4e-132 477.2 617 45.4
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 3.4e-131 473.4 473 53.5
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 7.4e-118 429.1 379 57.5
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 1.4e-113 414.8 380 55.5
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 2.5e-110 404.1 1228 27.9
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 2.6e-99 367.5 335 54.9
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 2.6e-99 367.5 428 49.5
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 1.8e-84 318.2 396 46.7
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 1.2e-80 305.4 252 59.1
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 1.4e-68 265.4 200 66.0
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 1.8e-63 248.4 425 40.7
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 1.0e-58 232.6 180 66.1
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.1e-55 222.6 179 63.7
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 7.6e-46 189.9 276 44.9
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 9.2e-44 183.0 303 40.6
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 3.3e-41 174.5 142 59.2
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 3.3e-41 174.5 129 65.1
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 6.0e-35 153.7 261 41.8
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 4.3e-33 147.5 250 42.4
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 2.4e-31 141.7 631 25.0
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 1.4e-28 132.5 103 65.0
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 3.1e-23 114.8 192 41.7
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 8.4e-21 106.7 153 42.5
HanXRQChr01g0001911 Helianthus annuus HOM05D006346 ORTHO05D007910 4.5e-14 84.3 51 72.5
A05p44400 Brassica napus HOM05D034890 ORTHO05D100541 3.3e-09 68.2 71 50.7
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 1.8e-07 62.4 68 48.5
Glyma.04G155200 Glycine max HOM05D006346 ORTHO05D007910 4.5e-06 57.8 93 39.8


User provided reference genes

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