Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 1.1e-72 276.6 137 100.0
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 7.4e-42 174.1 123 63.4
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 1.7e-33 146.4 118 56.8
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 7.0e-32 141.0 121 52.9
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 9.1e-32 140.6 119 52.9
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 5.0e-30 134.8 117 52.1
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 6.5e-30 134.4 121 52.1
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 8.5e-30 134.0 117 54.7
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 1.1e-29 133.7 117 53.0
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 1.9e-29 132.9 117 51.3
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 2.5e-29 132.5 124 47.6
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 2.5e-29 132.5 117 51.3
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 3.2e-29 132.1 125 48.8
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 4.2e-29 131.7 117 50.4
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 4.2e-29 131.7 123 48.8
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 4.2e-29 131.7 117 51.3
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 4.2e-29 131.7 117 51.3
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 4.2e-29 131.7 117 51.3
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 5.5e-29 131.3 120 50.0
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 7.2e-29 131.0 123 48.8
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 7.2e-29 131.0 129 46.5
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 9.4e-29 130.6 116 50.0
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 9.4e-29 130.6 119 50.4
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 1.2e-28 130.2 121 52.1
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 1.2e-28 130.2 121 49.6
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 1.2e-28 130.2 115 50.4
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 1.6e-28 129.8 122 52.5
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 3.6e-28 128.6 117 48.7
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 4.7e-28 128.3 128 46.9
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 6.1e-28 127.9 122 49.2
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 1.0e-27 127.1 118 51.7
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 1.0e-27 127.1 125 46.4
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 1.0e-27 127.1 125 46.4
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 1.8e-27 126.3 115 49.6
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 2.3e-27 125.9 116 50.0
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 3.0e-27 125.6 125 47.2
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 3.9e-27 125.2 117 48.7
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 5.2e-27 124.8 123 48.0
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 5.2e-27 124.8 114 50.0
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 5.2e-27 124.8 108 54.6
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 6.7e-27 124.4 124 48.4
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 6.7e-27 124.4 129 47.3
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 6.7e-27 124.4 123 45.5
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 6.7e-27 124.4 123 47.2
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 6.7e-27 124.4 123 47.2
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 8.8e-27 124.0 115 50.4
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 8.8e-27 124.0 115 50.4
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 8.8e-27 124.0 117 47.9
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 1.1e-26 123.6 114 50.0
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 1.1e-26 123.6 121 47.1
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 1.5e-26 123.2 116 48.3
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 1.5e-26 123.2 119 48.7
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 1.5e-26 123.2 119 48.7
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 1.5e-26 123.2 117 47.0
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 1.5e-26 123.2 138 47.1
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 2.0e-26 122.9 115 49.6
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 2.0e-26 122.9 121 46.3
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 2.0e-26 122.9 114 50.0
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 2.0e-26 122.9 121 46.3
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 4.4e-26 121.7 114 49.1
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 4.4e-26 121.7 113 49.6
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 5.7e-26 121.3 124 46.0
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 5.7e-26 121.3 118 47.5
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 5.7e-26 121.3 114 49.1
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 7.4e-26 120.9 121 46.3
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 7.4e-26 120.9 114 46.5
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 7.4e-26 120.9 114 46.5
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 9.7e-26 120.6 122 47.5
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 2.8e-25 119.0 115 47.8
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 2.8e-25 119.0 144 42.4
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 3.7e-25 118.6 119 47.1
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 4.8e-25 118.2 114 47.4
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 4.8e-25 118.2 125 45.6
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 6.3e-25 117.9 114 47.4
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 8.2e-25 117.5 115 46.1
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 8.2e-25 117.5 115 46.1
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 8.2e-25 117.5 127 44.1
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 8.2e-25 117.5 117 47.9
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 1.8e-24 116.3 126 46.0
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 2.4e-24 115.9 134 46.3
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 3.1e-24 115.5 97 50.5
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 3.1e-24 115.5 113 49.6
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 7.0e-24 114.4 92 57.6
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 7.0e-24 114.4 113 48.7
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 9.1e-24 114.0 114 45.6
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 1.2e-23 113.6 122 43.4
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 2.0e-23 112.8 168 36.3
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 4.5e-23 111.7 95 50.5
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 1.3e-22 110.2 87 55.2
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 2.9e-22 109.0 114 43.9
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 3.8e-22 108.6 117 44.4
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 8.5e-22 107.5 144 39.6
Nn4g26496 Nelumbo nucifera HOM05D006846 ORTHO05D008473 9.4e-21 104.0 132 38.6
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 2.7e-20 102.4 102 46.1
Cre04.g216300 Chlamydomonas reinhardtii HOM05D006846 ORTHO05D008473 5.2e-19 98.2 123 41.5
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 1.2e-18 97.1 95 43.2
MD16G1146600 Malus domestica HOM05D006846 ORTHO05D008473 1.7e-17 93.2 124 36.3
Lsat_1_v5_gn_6_71441 Lactuca sativa HOM05D006846 ORTHO05D008473 8.3e-17 90.9 122 39.3
ATR0693G432 Amborella trichopoda HOM05D006846 ORTHO05D008473 7.0e-16 87.8 73 50.7
Haze_00535 Corylus avellana HOM05D006846 ORTHO05D008473 1.2e-15 87.0 126 40.5
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 3.5e-15 85.5 102 39.2
QL11p040346 Quercus lobata HOM05D006846 ORTHO05D008473 4.5e-15 85.1 120 39.2
AagrBONN_evm.TU.Sc2ySwM_117.777 Anthoceros agrestis HOM05D006846 ORTHO05D008473 5.9e-15 84.7 59 62.7
TAR365G0638 Trochodendron aralioides HOM05D006846 ORTHO05D008473 5.9e-15 84.7 74 45.9
Haze_00536 Corylus avellana HOM05D006846 ORTHO05D008473 7.7e-15 84.3 126 39.7
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 1.1e-13 80.5 93 43.0
arahy.Tifrunner.gnm1.ann1.EYUN0W Arachis hypogaea HOM05D000385 ORTHO05D000269 1.5e-13 80.1 131 33.6
Gohir.A09G242000 Gossypium hirsutum HOM05D006846 ORTHO05D008473 3.2e-13 79.0 114 36.0
ClCG04G007450 Citrullus lanatus HOM05D006846 ORTHO05D008473 2.3e-11 72.8 65 53.8
Glyma.09G078800 Glycine max HOM05D006846 ORTHO05D008473 5.2e-11 71.6 65 53.8
MBI19_g16347_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 5.2e-11 71.6 95 42.1
Cpa.g.sc146.38 Carica papaya HOM05D006846 ORTHO05D008473 1.4e-08 63.5 52 48.1
Zm00001eb158200 Zea mays HOM05D006846 ORTHO05D008473 4.1e-08 62.0 51 45.1
Hma1.2p1_0013F.1_g007960 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 5.4e-08 61.6 50 48.0
CSS0047848 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 2.0e-07 59.7 53 52.8
MCO06G103 Micromonas commoda HOM05D006846 ORTHO05D008473 1.3e-06 57.0 120 30.0


User provided reference genes

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