Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0021s0060 Marchantia polymorpha HOM05D006326 ORTHO05D007589 1.0e-86 323.6 183 100.0
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 7.6e-18 94.7 179 36.9
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 2.5e-13 79.7 104 43.3
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 2.5e-13 79.7 106 43.4
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 1.3e-12 77.4 106 41.5
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 3.1e-11 72.8 105 41.0
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 4.1e-11 72.4 105 39.0
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 5.3e-11 72.0 105 41.0
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 5.3e-11 72.0 105 41.0
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 6.9e-11 71.6 104 41.3
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 9.0e-11 71.2 105 41.0
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 1.2e-10 70.9 99 42.4
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.5e-10 70.5 105 40.0
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 2.0e-10 70.1 104 44.2
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 2.0e-10 70.1 107 41.1
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 2.6e-10 69.7 105 40.0
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 3.4e-10 69.3 105 40.0
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 4.5e-10 68.9 105 41.0
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 4.5e-10 68.9 104 38.5
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 7.7e-10 68.2 105 40.0
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 1.3e-09 67.4 104 39.4
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 1.3e-09 67.4 101 41.6
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 1.3e-09 67.4 104 40.4
CBR_g50470 Chara braunii HOM05D006326 ORTHO05D007589 1.7e-09 67.0 127 33.1
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 1.7e-09 67.0 106 41.5
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 1.7e-09 67.0 105 39.0
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 1.7e-09 67.0 104 38.5
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 1.7e-09 67.0 106 40.6
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 2.2e-09 66.6 104 38.5
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 2.9e-09 66.2 107 39.3
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 3.8e-09 65.9 105 38.1
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 5.0e-09 65.5 107 39.3
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 5.0e-09 65.5 108 38.0
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 5.0e-09 65.5 104 39.4
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 5.0e-09 65.5 104 39.4
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 5.0e-09 65.5 104 38.5
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 6.5e-09 65.1 105 40.0
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 6.5e-09 65.1 106 38.7
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 6.5e-09 65.1 104 39.4
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 8.5e-09 64.7 104 38.5
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 1.1e-08 64.3 106 39.6
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 1.1e-08 64.3 106 39.6
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 1.1e-08 64.3 104 36.5
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.4e-08 63.9 104 38.5
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 1.4e-08 63.9 99 39.4
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 1.4e-08 63.9 174 32.2
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 1.9e-08 63.5 106 38.7
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 1.9e-08 63.5 106 37.7
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 1.9e-08 63.5 104 38.5
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 3.2e-08 62.8 106 37.7
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 3.2e-08 62.8 104 37.5
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 3.2e-08 62.8 104 37.5
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 3.2e-08 62.8 104 37.5
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 4.2e-08 62.4 103 39.8
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 4.2e-08 62.4 104 37.5
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 4.2e-08 62.4 104 37.5
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 5.5e-08 62.0 101 36.6
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 5.5e-08 62.0 104 38.5
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 5.5e-08 62.0 104 38.5
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 5.5e-08 62.0 107 36.4
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 9.4e-08 61.2 106 37.7
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 9.4e-08 61.2 107 37.4
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 9.4e-08 61.2 107 36.4
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 9.4e-08 61.2 100 35.0
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 1.2e-07 60.8 106 37.7
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 2.7e-07 59.7 77 42.9
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 2.7e-07 59.7 113 36.3
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 3.6e-07 59.3 106 38.7
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 3.6e-07 59.3 104 36.5
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 4.6e-07 58.9 106 38.7
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 4.6e-07 58.9 101 33.7
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 7.9e-07 58.2 105 36.2
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 1.0e-06 57.8 76 44.7
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 1.8e-06 57.0 107 36.4
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 6.7e-06 55.1 104 35.6


User provided reference genes

Program Settings