Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0021s0057 Marchantia polymorpha HOM05D004845 ORTHO05D005957 0.0e+00 2919.0 1628 100.0
Pp3c12_1570 Physcomitrium patens HOM05D004845 ORTHO05D005957 1.6e-103 382.5 1744 32.6
SMO334G0114 Selaginella moellendorffii HOM05D004845 ORTHO05D005957 3.8e-60 238.4 381 46.2
AagrBONN_evm.TU.Sc2ySwM_344.5033 Anthoceros agrestis HOM05D004845 ORTHO05D005957 5.1e-57 228.0 1638 26.6
SEGI_05846 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 3.7e-55 221.9 1667 28.3
SEGI_07021 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 6.1e-50 204.5 459 40.1
Nn1g08771 Nelumbo nucifera HOM05D004845 ORTHO05D005957 2.3e-49 202.6 406 37.7
ATR0730G184 Amborella trichopoda HOM05D004845 ORTHO05D005957 3.3e-48 198.7 436 37.8
TAR629G3185 Trochodendron aralioides HOM05D004845 ORTHO05D005957 6.3e-47 194.5 408 39.7
GSVIVG01016889001 Vitis vinifera HOM05D004845 ORTHO05D005957 1.1e-46 193.7 440 37.3
Dinv37932 Davidia involucrata HOM05D004845 ORTHO05D005957 2.0e-45 189.5 438 37.9
DCAR_026375 Daucus carota HOM05D004845 ORTHO05D005957 3.2e-43 182.2 363 38.8
Thecc.06G108000 Theobroma cacao HOM05D004845 ORTHO05D005957 3.2e-43 182.2 381 38.8
FAN02G0586 Fragaria x ananassa HOM05D004845 ORTHO05D005957 4.2e-43 181.8 445 36.2
PGR102G0505 Punica granatum HOM05D004845 ORTHO05D005957 4.2e-43 181.8 497 36.2
Dinv30397 Davidia involucrata HOM05D004845 ORTHO05D005957 1.2e-42 180.3 434 37.6
Gohir.A05G133700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 1.6e-42 179.9 409 36.4
Nitab4.5_0004848g0010 Nicotiana tabacum HOM05D004845 ORTHO05D005957 1.6e-42 179.9 442 36.7
Duzib160G0801 Durio zibethinus HOM05D004845 ORTHO05D005957 2.1e-42 179.5 409 36.9
vmacro18819 Vaccinium macrocarpon HOM05D004845 ORTHO05D005957 2.7e-42 179.1 446 36.3
Gohir.D05G135700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 3.6e-42 178.7 409 36.2
HanXRQChr09g0276331 Helianthus annuus HOM05D004845 ORTHO05D005957 3.6e-42 178.7 412 36.4
ClCG07G013620 Citrullus lanatus HOM05D004845 ORTHO05D005957 4.7e-42 178.3 438 35.8
Gorai.009G139700 Gossypium raimondii HOM05D004845 ORTHO05D005957 4.7e-42 178.3 409 36.2
Manes.04G137600 Manihot esculenta HOM05D004845 ORTHO05D005957 8.0e-42 177.6 353 38.2
Glyma.07G012400 Glycine max HOM05D004845 ORTHO05D005957 1.0e-41 177.2 440 35.9
FvH4_6g32970 Fragaria vesca HOM05D004845 ORTHO05D005957 3.0e-41 175.6 441 35.4
FAN14G1946 Fragaria x ananassa HOM05D004845 ORTHO05D005957 3.0e-41 175.6 482 36.3
THA.LOC104817934 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 4.0e-41 175.3 436 36.2
Potri.003G033100 Populus trichocarpa HOM05D004845 ORTHO05D005957 1.2e-40 173.7 364 36.5
Sc12g0009860 Simmondsia chinensis HOM05D004845 ORTHO05D005957 1.5e-40 173.3 462 34.8
CANSAT56G3316 Cannabis sativa HOM05D004845 ORTHO05D005957 2.0e-40 172.9 378 35.4
CDE10G0876 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 2.6e-40 172.6 445 36.2
Ah.01g016900 Amaranthus hybridus HOM05D004845 ORTHO05D005957 5.7e-40 171.4 358 37.2
MD17G1176700 Malus domestica HOM05D004845 ORTHO05D005957 7.5e-40 171.0 442 35.7
MSTRG.22604 Avicennia marina HOM05D004845 ORTHO05D005957 9.7e-40 170.6 452 34.3
Sed0014548 Sechium edule HOM05D004845 ORTHO05D005957 9.7e-40 170.6 432 36.1
QL05p015844 Quercus lobata HOM05D004845 ORTHO05D005957 1.3e-39 170.2 466 34.1
Solyc03g121380.3 Solanum lycopersicum HOM05D004845 ORTHO05D005957 1.3e-39 170.2 501 33.3
Sopen03g040190 Solanum pennellii HOM05D004845 ORTHO05D005957 1.3e-39 170.2 499 33.7
FAN09G4600 Fragaria x ananassa HOM05D004845 ORTHO05D005957 2.2e-39 169.5 448 35.5
VMungo0331G0639 Vigna mungo HOM05D004845 ORTHO05D005957 2.8e-39 169.1 456 33.6
Phvul.010G141800 Phaseolus vulgaris HOM05D004845 ORTHO05D005957 4.8e-39 168.3 434 37.8
THA.LOC104810560 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 4.8e-39 168.3 431 36.0
PSO170G6909 Papaver somniferum HOM05D004845 ORTHO05D005957 8.2e-39 167.5 443 36.8
RcHm_v2.0_Chr2g0142521 Rosa chinensis HOM05D004845 ORTHO05D005957 8.2e-39 167.5 440 35.2
Prupe.3G052500 Prunus persica HOM05D004845 ORTHO05D005957 1.4e-38 166.8 370 37.6
arahy.Tifrunner.gnm1.ann1.JSQ5P9 Arachis hypogaea HOM05D004845 ORTHO05D005957 2.4e-38 166.0 370 35.1
Glyma.08G196100 Glycine max HOM05D004845 ORTHO05D005957 3.1e-38 165.6 518 32.0
DCAR_007608 Daucus carota HOM05D004845 ORTHO05D005957 5.3e-38 164.9 416 33.7
CsaV3_3G044010 Cucumis sativus L. HOM05D004845 ORTHO05D005957 9.1e-38 164.1 430 35.6
Duzib235G0635 Durio zibethinus HOM05D004845 ORTHO05D005957 9.1e-38 164.1 418 36.4
Sabra03G0019000 Salix brachista HOM05D004845 ORTHO05D005957 9.1e-38 164.1 355 36.6
CAN.G1668.10 Capsicum annuum HOM05D004845 ORTHO05D005957 2.7e-37 162.5 347 36.0
Migut.I01002 Erythranthe guttata HOM05D004845 ORTHO05D005957 2.7e-37 162.5 433 34.9
Sed0023831 Sechium edule HOM05D004845 ORTHO05D005957 2.7e-37 162.5 456 35.3
Ca_23299_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 5.9e-37 161.4 369 35.8
Cc04_g02180 Coffea canephora HOM05D004845 ORTHO05D005957 1.0e-36 160.6 461 32.1
Atru.chr1.3636 Acer truncatum HOM05D004845 ORTHO05D005957 1.3e-36 160.2 372 35.8
Aqoxy7G00060 Aquilegia oxysepala HOM05D004845 ORTHO05D005957 1.3e-36 160.2 462 32.7
MD09G1196000 Malus domestica HOM05D004845 ORTHO05D005957 2.2e-36 159.5 441 33.8
EL10Ac9g21102 Beta vulgaris HOM05D004845 ORTHO05D005957 3.8e-36 158.7 401 34.9
ECA232G1750 Erigeron canadensis HOM05D004845 ORTHO05D005957 3.8e-36 158.7 438 34.7
Medtr8g015620 Medicago truncatula HOM05D004845 ORTHO05D005957 5.0e-36 158.3 381 34.6
CiPaw.02G142000 Carya illinoinensis HOM05D004845 ORTHO05D005957 1.1e-35 157.1 467 33.4
Hund07666 Selenicereus undatus HOM05D004845 ORTHO05D005957 1.1e-35 157.1 381 34.6
AUR62023919 Chenopodium quinoa HOM05D004845 ORTHO05D005957 1.5e-35 156.8 364 34.6
Zm00001eb401540 Zea mays HOM05D004845 ORTHO05D005957 1.5e-35 156.8 410 34.4
AUR62038325 Chenopodium quinoa HOM05D004845 ORTHO05D005957 1.9e-35 156.4 364 35.4
MELO3C013040.2 Cucumis melo HOM05D004845 ORTHO05D005957 2.5e-35 156.0 503 34.2
Thhalv10019924m.g Eutrema salsugineum HOM05D004845 ORTHO05D005957 3.2e-35 155.6 367 37.1
Lj3g0006882 Lotus japonicus HOM05D004845 ORTHO05D005957 5.5e-35 154.8 389 34.2
SGA_v2.0_scaffold45G16992 Striga asiatica HOM05D004845 ORTHO05D005957 5.5e-35 154.8 494 32.4
Lj3g0020048 Lotus japonicus HOM05D004845 ORTHO05D005957 9.4e-35 154.1 368 35.6
Ciclev10024729m.g Citrus clementina HOM05D004845 ORTHO05D005957 1.2e-34 153.7 428 33.9
Rhsim08G0231600 Rhododendron simsii HOM05D004845 ORTHO05D005957 2.1e-34 152.9 403 34.7
TWI31G1049 Tripterygium wilfordii HOM05D004845 ORTHO05D005957 2.1e-34 152.9 498 33.5
Zm00001eb006560 Zea mays HOM05D004845 ORTHO05D005957 4.7e-34 151.8 474 32.9
Lsat_1_v5_gn_4_95940 Lactuca sativa HOM05D004845 ORTHO05D005957 8.0e-34 151.0 427 32.6
SGA_v2.0_scaffold71G23747 Striga asiatica HOM05D004845 ORTHO05D005957 8.0e-34 151.0 453 34.0
Carub.0003s2130 Capsella rubella HOM05D004845 ORTHO05D005957 3.0e-33 149.1 373 36.5
AL3G35330 Arabidopsis lyrata HOM05D004845 ORTHO05D005957 8.8e-33 147.5 370 35.7
Peaxi162Scf00038g01322 Petunia axillaris HOM05D004845 ORTHO05D005957 2.6e-32 146.0 489 30.7
Sp3g19330 Schrenkiella parvula HOM05D004845 ORTHO05D005957 2.6e-32 146.0 362 36.5
unitig_749.g14048 Utricularia gibba HOM05D004845 ORTHO05D005957 7.5e-32 144.4 400 31.8
Aa31LG8G7990 Aethionema arabicum HOM05D004845 ORTHO05D005957 1.7e-31 143.3 404 35.6
AT3G21290 Arabidopsis thaliana HOM05D004845 ORTHO05D005957 1.8e-30 139.8 364 34.6
arahy.Tifrunner.gnm1.ann1.7F0ZFP Arachis hypogaea HOM05D004845 ORTHO05D005957 1.8e-30 139.8 390 33.3
Oeu026736.3 Olea europaea HOM05D004845 ORTHO05D005957 1.6e-29 136.7 580 29.7
CDE10G0270 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 2.7e-29 136.0 448 33.5
Cfa003605 Carpinus fangiana HOM05D004845 ORTHO05D005957 2.3e-28 132.9 373 34.9
HanXRQChr05g0140141 Helianthus annuus HOM05D004845 ORTHO05D005957 2.3e-28 132.9 433 30.9
COL.COLO4_30609 Corchorus olitorius HOM05D004845 ORTHO05D005957 4.2e-27 128.6 328 37.2
C05p42240 Brassica napus HOM05D004845 ORTHO05D005957 7.2e-27 127.9 359 35.7
BcaC05g28184 Brassica carinata HOM05D004845 ORTHO05D005957 2.1e-26 126.3 355 35.8
BolC5t32952H Brassica oleracea HOM05D004845 ORTHO05D005957 2.1e-26 126.3 355 35.8
Lalb_Chr15g0087461 Lupinus albus HOM05D004845 ORTHO05D005957 2.8e-26 125.9 335 35.2
HPP92_028291 Vanilla planifolia HOM05D004845 ORTHO05D005957 3.6e-26 125.6 207 44.0
BraA05t21625Z Brassica rapa HOM05D004845 ORTHO05D005957 4.7e-26 125.2 355 35.5
Cpa.g.sc131.35 Carica papaya HOM05D004845 ORTHO05D005957 8.0e-26 124.4 299 36.8
A05p27330 Brassica napus HOM05D004845 ORTHO05D005957 1.0e-25 124.0 355 33.2
BcaB06g26218 Brassica carinata HOM05D004845 ORTHO05D005957 1.4e-25 123.6 433 33.0
Lalb_Chr14g0372871 Lupinus albus HOM05D004845 ORTHO05D005957 1.4e-25 123.6 138 47.1
Lalb_Chr04g0263091 Lupinus albus HOM05D004845 ORTHO05D005957 1.8e-25 123.2 439 31.7
Oeu052809.1 Olea europaea HOM05D004845 ORTHO05D005957 8.8e-25 120.9 293 35.5
FAN05G2503 Fragaria x ananassa HOM05D004845 ORTHO05D005957 1.1e-22 114.0 386 33.2
Actinidia21743 Actinidia chinensis HOM05D004845 ORTHO05D005957 1.4e-22 113.6 290 36.2
Manes.11G028800 Manihot esculenta HOM05D004845 ORTHO05D005957 2.4e-22 112.8 364 31.0
CBR_g20996 Chara braunii HOM05D004845 ORTHO05D005957 2.0e-21 109.8 751 28.5
BcaC09g49066 Brassica carinata HOM05D004845 ORTHO05D005957 1.7e-20 106.7 138 44.9
C01p42960 Brassica napus HOM05D004845 ORTHO05D005957 1.9e-19 103.2 119 47.9
BolC1t04240H Brassica oleracea HOM05D004845 ORTHO05D005957 1.2e-18 100.5 129 46.5
Actinidia32134 Actinidia chinensis HOM05D004845 ORTHO05D005957 5.7e-16 91.7 175 34.9
Psat4g193760 Pisum sativum HOM05D004845 ORTHO05D005957 1.4e-14 87.0 133 36.8
Eucgr.J02886 Eucalyptus grandis HOM05D004845 ORTHO05D005957 7.8e-13 81.3 148 35.8
CSS0001379 Camellia sinensis var. sinensis HOM05D004845 ORTHO05D005957 1.3e-12 80.5 138 35.5
Os03g0187100 Oryza sativa ssp. japonica HOM05D004845 ORTHO05D005957 2.3e-12 79.7 113 39.8
TPR.G8763 Trifolium pratense HOM05D004845 ORTHO05D005957 3.0e-12 79.3 403 26.8
CARHR097190 Cardamine hirsuta HOM05D004845 ORTHO05D005957 1.1e-11 77.4 201 27.9
CDE10G0326 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 5.6e-11 75.1 143 33.6
CBR_g20995 Chara braunii HOM05D004845 ORTHO05D005957 7.3e-11 74.7 280 26.4
Actinidia21742 Actinidia chinensis HOM05D004845 ORTHO05D005957 4.7e-10 72.0 79 46.8
Medtr8g015610 Medicago truncatula HOM05D004845 ORTHO05D005957 4.7e-10 72.0 130 33.1
unitig_749.g14049 Utricularia gibba HOM05D004845 ORTHO05D005957 6.2e-10 71.6 100 39.0
Lj5C49T6 Lonicera japonica HOM05D004845 ORTHO05D005957 1.4e-09 70.5 162 39.5
Ca_23298_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 1.5e-08 67.0 107 35.5
HPP92_028293 Vanilla planifolia HOM05D004845 ORTHO05D005957 3.4e-08 65.9 199 29.6
SHI11164 Sapria himalayana HOM05D004845 ORTHO05D003034 9.8e-08 64.3 78 42.3
Duzib192G0218 Durio zibethinus HOM05D004845 ORTHO05D005957 1.3e-07 63.9 180 33.3
Lalb_Chr14g0372881 Lupinus albus HOM05D004845 ORTHO05D005957 2.9e-07 62.8 142 32.4


User provided reference genes

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