Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0021s0043 Marchantia polymorpha HOM05D003640 ORTHO05D004439 0.0e+00 1912.1 1110 100.0
Pp3c14_13150 Physcomitrium patens HOM05D003640 ORTHO05D004439 1.9e-167 594.3 1127 42.9
Pp3c17_17470 Physcomitrium patens HOM05D003640 ORTHO05D004439 4.0e-138 496.9 1147 38.8
TAR629G0154 Trochodendron aralioides HOM05D003640 ORTHO05D004439 7.5e-92 343.2 921 33.2
GSVIVG01038625001 Vitis vinifera HOM05D003640 ORTHO05D004439 1.4e-85 322.4 857 34.5
TAR636G3562 Trochodendron aralioides HOM05D003640 ORTHO05D004439 1.1e-82 312.8 991 32.4
Dinv29226 Davidia involucrata HOM05D003640 ORTHO05D004439 3.1e-82 311.2 873 33.3
Nn1g00405 Nelumbo nucifera HOM05D003640 ORTHO05D004439 3.1e-82 311.2 1056 31.2
Actinidia08687 Actinidia chinensis HOM05D003640 ORTHO05D004439 1.0e-80 306.2 924 33.0
QL93p0214_0013 Quercus lobata HOM05D003640 ORTHO05D004439 1.0e-80 306.2 975 33.6
CSS0041088 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 2.3e-80 305.1 980 33.3
QL09p007408 Quercus lobata HOM05D003640 ORTHO05D004439 3.3e-79 301.2 969 33.7
SEGI_36158 Sequoiadendron giganteum HOM05D003640 ORTHO05D004439 3.3e-79 301.2 489 44.0
RcHm_v2.0_Chr1g0382521 Rosa chinensis HOM05D003640 ORTHO05D004439 2.1e-78 298.5 907 34.6
FAN10G0822 Fragaria x ananassa HOM05D003640 ORTHO05D004439 3.6e-78 297.7 925 34.2
FAN10G2795 Fragaria x ananassa HOM05D003640 ORTHO05D004439 3.6e-78 297.7 926 34.8
TAR375G0550 Trochodendron aralioides HOM05D003640 ORTHO05D004439 3.6e-78 297.7 972 32.4
Nn3g18833 Nelumbo nucifera HOM05D003640 ORTHO05D004439 1.0e-77 296.2 971 33.1
FAN01G0295 Fragaria x ananassa HOM05D003640 ORTHO05D004439 1.2e-76 292.7 946 33.5
ATR0580G072 Amborella trichopoda HOM05D003640 ORTHO05D004439 3.7e-75 287.7 976 33.1
Actinidia34257 Actinidia chinensis HOM05D003640 ORTHO05D004439 4.9e-75 287.3 959 32.2
Ca_16756_v3 Cicer arietinum L. HOM05D003640 ORTHO05D004439 6.4e-75 287.0 966 33.1
PSO384G0385 Papaver somniferum HOM05D003640 ORTHO05D004439 6.4e-75 287.0 938 32.4
MD01G1227300 Malus domestica HOM05D003640 ORTHO05D004439 1.8e-74 285.4 995 31.4
Aqoxy7G00014 Aquilegia oxysepala HOM05D003640 ORTHO05D004439 3.2e-74 284.6 985 31.0
FvH4_7g32660 Fragaria vesca HOM05D003640 ORTHO05D004439 3.2e-74 284.6 893 33.8
Rhsim03G0214000 Rhododendron simsii HOM05D003640 ORTHO05D004439 4.1e-74 284.3 978 32.4
FAN03G1455 Fragaria x ananassa HOM05D003640 ORTHO05D004439 5.4e-74 283.9 921 34.1
MBI12_g23004_MAGBIO Magnolia biondii HOM05D003640 ORTHO05D004439 1.2e-73 282.7 1003 30.8
PSO135G0929 Papaver somniferum HOM05D003640 ORTHO05D004439 2.0e-73 282.0 957 31.8
Glyma.06G134300 Glycine max HOM05D003640 ORTHO05D004439 4.6e-73 280.8 906 30.0
Lj1g0027227 Lotus japonicus HOM05D003640 ORTHO05D004439 7.8e-73 280.0 972 31.1
Prupe.2G317300 Prunus persica HOM05D003640 ORTHO05D004439 3.0e-72 278.1 1011 31.2
Atru.chr12.2367 Acer truncatum HOM05D003640 ORTHO05D004439 1.5e-71 275.8 940 30.2
MELO3C005925.2 Cucumis melo HOM05D003640 ORTHO05D004439 1.5e-71 275.8 990 30.4
TWI39G1295 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 1.5e-71 275.8 1001 32.8
MD07G1297600 Malus domestica HOM05D003640 ORTHO05D004439 2.5e-71 275.0 990 30.8
CANSAT21G0645 Cannabis sativa HOM05D003640 ORTHO05D004439 4.3e-71 274.2 1060 29.7
Potri.015G006700 Populus trichocarpa HOM05D003640 ORTHO05D004439 7.3e-71 273.5 970 31.0
Potri.012G023200 Populus trichocarpa HOM05D003640 ORTHO05D004439 3.6e-70 271.2 950 28.7
Psat0s2807g0080 Pisum sativum HOM05D003640 ORTHO05D004439 6.2e-70 270.4 857 34.2
vmacro06427 Vaccinium macrocarpon HOM05D003640 ORTHO05D004439 8.0e-70 270.0 1025 29.7
Cc02_g00960 Coffea canephora HOM05D003640 ORTHO05D004439 2.3e-69 268.5 979 31.7
Sed0021595 Sechium edule HOM05D003640 ORTHO05D004439 5.2e-69 267.3 984 31.0
Medtr3g092250 Medicago truncatula HOM05D003640 ORTHO05D004439 2.0e-68 265.4 923 32.5
CsaV3_5G000020 Cucumis sativus L. HOM05D003640 ORTHO05D004439 4.4e-68 264.2 992 30.3
THA.LOC104825162 Tarenaya hassleriana HOM05D003640 ORTHO05D004439 4.4e-68 264.2 834 32.9
ClCG01G000140 Citrullus lanatus HOM05D003640 ORTHO05D004439 5.8e-68 263.8 992 30.1
Duzib084G0116 Durio zibethinus HOM05D003640 ORTHO05D004439 5.8e-68 263.8 996 31.8
Lalb_Chr23g0271841 Lupinus albus HOM05D003640 ORTHO05D004439 1.3e-67 262.7 907 31.4
Manes.01G041300 Manihot esculenta HOM05D003640 ORTHO05D004439 2.2e-67 261.9 969 31.1
Sabra15G0004700 Salix brachista HOM05D003640 ORTHO05D004439 2.2e-67 261.9 944 30.4
Haze_00277 Corylus avellana HOM05D003640 ORTHO05D004439 4.9e-67 260.8 981 31.0
CAN.G358.147 Capsicum annuum HOM05D003640 ORTHO05D004439 1.4e-66 259.2 770 31.6
Actinidia28276 Actinidia chinensis HOM05D003640 ORTHO05D004439 2.4e-66 258.5 988 30.4
Sed0000635 Sechium edule HOM05D003640 ORTHO05D004439 2.4e-66 258.5 979 30.7
Dinv35374 Davidia involucrata HOM05D003640 ORTHO05D004439 4.1e-66 257.7 893 33.0
arahy.Tifrunner.gnm1.ann1.1EDB5Y Arachis hypogaea HOM05D003640 ORTHO05D004439 1.2e-65 256.1 993 30.5
arahy.Tifrunner.gnm1.ann1.BT3HV7 Arachis hypogaea HOM05D003640 ORTHO05D004439 1.6e-65 255.8 990 30.9
Glyma.04G230800 Glycine max HOM05D003640 ORTHO05D004439 1.6e-65 255.8 945 30.9
EL10Ac3g05201 Beta vulgaris HOM05D003640 ORTHO05D004439 4.6e-65 254.2 891 32.1
CiPaw.05G202900 Carya illinoinensis HOM05D003640 ORTHO05D004439 6.0e-65 253.8 912 32.5
Hund09700 Selenicereus undatus HOM05D003640 ORTHO05D004439 1.0e-64 253.1 988 30.7
CiPaw.06G042300 Carya illinoinensis HOM05D003640 ORTHO05D004439 6.6e-64 250.4 990 31.5
Gohir.D09G181300 Gossypium hirsutum HOM05D003640 ORTHO05D004439 6.6e-64 250.4 854 30.8
Lalb_Chr11g0067271 Lupinus albus HOM05D003640 ORTHO05D004439 1.5e-63 249.2 950 29.4
SGA_v2.0_scaffold565G52945 Striga asiatica HOM05D003640 ORTHO05D004439 1.5e-63 249.2 849 30.0
Thecc.03G206700 Theobroma cacao HOM05D003640 ORTHO05D004439 1.6e-62 245.7 1000 31.2
DCAR_020359 Daucus carota HOM05D003640 ORTHO05D004439 4.7e-62 244.2 849 29.6
Hund21040 Selenicereus undatus HOM05D003640 ORTHO05D004439 1.1e-61 243.0 854 30.3
Aa31sc289G20 Aethionema arabicum HOM05D003640 ORTHO05D004439 6.8e-61 240.4 833 31.0
PGR142G2086 Punica granatum HOM05D003640 ORTHO05D004439 1.2e-60 239.6 982 29.8
Os08g0543600 Oryza sativa ssp. japonica HOM05D003640 ORTHO05D004439 2.6e-60 238.4 931 29.8
Lalb_Chr08g0239801 Lupinus albus HOM05D003640 ORTHO05D004439 7.5e-60 236.9 981 29.2
CSS0045837 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 9.9e-60 236.5 915 31.3
Zm00001eb198460 Zea mays HOM05D003640 ORTHO05D004439 2.2e-59 235.3 910 30.7
Phvul.009G050200 Phaseolus vulgaris HOM05D003640 ORTHO05D004439 2.9e-59 235.0 987 31.2
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 6.4e-59 233.8 976 29.9
Nitab4.5_0001993g0040 Nicotiana tabacum HOM05D003640 ORTHO05D004439 8.3e-59 233.4 962 29.3
VMungo1309G3003 Vigna mungo HOM05D003640 ORTHO05D004439 1.4e-58 232.6 983 29.2
AUR62006022 Chenopodium quinoa HOM05D003640 ORTHO05D004439 4.1e-58 231.1 931 31.5
Solyc03g082490.4 Solanum lycopersicum HOM05D003640 ORTHO05D004439 5.4e-58 230.7 989 30.2
Gorai.004G124100 Gossypium raimondii HOM05D003640 ORTHO05D004439 2.1e-57 228.8 1019 31.1
Sabra12G0010700 Salix brachista HOM05D003640 ORTHO05D004439 2.1e-57 228.8 1089 26.5
MSTRG.26989 Avicennia marina HOM05D003640 ORTHO05D004439 3.5e-57 228.0 952 31.1
ECA232G0587 Erigeron canadensis HOM05D003640 ORTHO05D004439 3.5e-57 228.0 884 27.9
Zm00001eb037420 Zea mays HOM05D003640 ORTHO05D004439 6.0e-57 227.3 928 29.8
Gohir.D08G115200 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.3e-56 226.1 1012 31.3
Oeu055180.3 Olea europaea HOM05D003640 ORTHO05D004439 1.3e-56 226.1 945 31.6
SalBow6G0961 Salvia bowleyana HOM05D003640 ORTHO05D004439 1.3e-56 226.1 923 30.3
MSTRG.8618 Avicennia marina HOM05D003640 ORTHO05D004439 2.3e-56 225.3 1002 30.3
Oeu037965.1 Olea europaea HOM05D003640 ORTHO05D004439 6.6e-56 223.8 981 28.4
DCAR_008967 Daucus carota HOM05D003640 ORTHO05D004439 8.6e-56 223.4 933 30.9
Gohir.A08G103800 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.9e-55 222.2 1021 31.0
Migut.F00997 Erythranthe guttata HOM05D003640 ORTHO05D004439 5.6e-55 220.7 989 29.6
AT5G53620 Arabidopsis thaliana HOM05D003640 ORTHO05D004439 7.3e-55 220.3 813 32.2
CARHR266770 Cardamine hirsuta HOM05D003640 ORTHO05D004439 1.6e-54 219.2 814 31.9
SGA_v2.0_scaffold136G35055 Striga asiatica HOM05D003640 ORTHO05D004439 2.1e-54 218.8 908 29.7
CARHR266800 Cardamine hirsuta HOM05D003640 ORTHO05D004439 2.8e-54 218.4 874 30.3
unitig_92.g28243 Utricularia gibba HOM05D003640 ORTHO05D004439 4.7e-54 217.6 979 30.2
Gohir.A12G247000 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.1e-53 216.5 972 31.3
AUR62035604 Chenopodium quinoa HOM05D003640 ORTHO05D004439 3.1e-53 214.9 947 31.0
AL8G28460 Arabidopsis lyrata HOM05D003640 ORTHO05D004439 5.2e-53 214.2 821 30.9
MSTRG.8540 Avicennia marina HOM05D003640 ORTHO05D004439 8.9e-53 213.4 887 29.5
Gohir.D12G247700 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.5e-52 212.6 948 32.3
Duzib068G1167 Durio zibethinus HOM05D003640 ORTHO05D004439 2.0e-52 212.2 1000 29.2
Carub.0008s1397 Capsella rubella HOM05D003640 ORTHO05D004439 2.6e-52 211.8 875 30.9
Oeu061023.1 Olea europaea HOM05D003640 ORTHO05D004439 5.8e-52 210.7 886 29.1
Sopen03g022220 Solanum pennellii HOM05D003640 ORTHO05D004439 7.6e-52 210.3 772 31.6
Lsat_1_v5_gn_9_50181 Lactuca sativa HOM05D003640 ORTHO05D004439 1.3e-51 209.5 962 26.7
Lsat_1_v5_gn_9_50221 Lactuca sativa HOM05D003640 ORTHO05D004439 1.3e-51 209.5 963 27.2
PSO063G3729 Papaver somniferum HOM05D003640 ORTHO05D004439 4.9e-51 207.6 938 27.9
Gorai.006G203300 Gossypium raimondii HOM05D003640 ORTHO05D004439 7.1e-50 203.8 965 29.4
Gorai.008G265800 Gossypium raimondii HOM05D003640 ORTHO05D004439 7.1e-50 203.8 1007 31.6
HanXRQChr05g0139301 Helianthus annuus HOM05D003640 ORTHO05D004439 4.6e-49 201.1 966 26.9
CDE04G2417 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 6.0e-49 200.7 925 27.2
Duzib205G1657 Durio zibethinus HOM05D003640 ORTHO05D004439 5.1e-48 197.6 1024 27.7
Sc19g0000670 Simmondsia chinensis HOM05D003640 ORTHO05D004439 1.9e-47 195.7 838 29.6
COL.COLO4_14351 Corchorus olitorius HOM05D003640 ORTHO05D004439 3.3e-47 194.9 821 27.2
Sp6g15750 Schrenkiella parvula HOM05D003640 ORTHO05D004439 3.3e-47 194.9 808 30.7
TWI23G0563 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 2.8e-46 191.8 794 28.8
Hma1.2p1_0094F.1_g047240 Hydrangea macrophylla HOM05D003640 ORTHO05D004439 3.6e-46 191.4 988 28.8
Carub.0008s1383 Capsella rubella HOM05D003640 ORTHO05D004439 4.7e-46 191.0 850 29.8
Thhalv10012857m.g Eutrema salsugineum HOM05D003640 ORTHO05D004439 1.4e-45 189.5 870 29.9
BolC3t14166H Brassica oleracea HOM05D003640 ORTHO05D004439 9.0e-45 186.8 832 30.2
C03p17530 Brassica napus HOM05D003640 ORTHO05D004439 2.0e-44 185.7 832 30.2
SalBow2G2490 Salvia bowleyana HOM05D003640 ORTHO05D004439 8.4e-43 180.3 1003 28.2
Gohir.A09G186400 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.4e-42 179.5 963 27.2
BraA03t10798Z Brassica rapa HOM05D003640 ORTHO05D004439 7.1e-42 177.2 830 29.2
HanXRQChr15g0485391 Helianthus annuus HOM05D003640 ORTHO05D004439 7.1e-42 177.2 934 27.2
Sp6g15760 Schrenkiella parvula HOM05D003640 ORTHO05D004439 3.5e-41 174.9 725 30.1
A03p15040 Brassica napus HOM05D003640 ORTHO05D004439 6.0e-41 174.1 832 29.4
SHI02298 Sapria himalayana HOM05D003640 ORTHO05D004439 1.0e-40 173.3 443 33.9
BcaB01g04251 Brassica carinata HOM05D003640 ORTHO05D004439 3.0e-40 171.8 832 29.1
Ah.07g204850 Amaranthus hybridus HOM05D003640 ORTHO05D004439 5.1e-40 171.0 975 29.0
BcaB05g22060 Brassica carinata HOM05D003640 ORTHO05D004439 2.5e-39 168.7 719 28.7
Cpa.g.sc3.144 Carica papaya HOM05D003640 ORTHO05D004439 4.0e-37 161.4 778 28.3
QL09p007399 Quercus lobata HOM05D003640 ORTHO05D004439 4.0e-37 161.4 336 36.6
QL93p0214_0021 Quercus lobata HOM05D003640 ORTHO05D004439 4.0e-37 161.4 336 36.6
Lj1C1026T8 Lonicera japonica HOM05D003640 ORTHO05D004439 4.3e-31 141.4 988 26.5
BcaC01g06262 Brassica carinata HOM05D003640 ORTHO05D004439 5.8e-28 131.0 218 44.5
BcaB01g04247 Brassica carinata HOM05D003640 ORTHO05D004439 1.3e-27 129.8 147 52.4
A03p14940 Brassica napus HOM05D003640 ORTHO05D004439 6.4e-27 127.5 143 51.7
BraA03t10789Z Brassica rapa HOM05D003640 ORTHO05D004439 6.4e-27 127.5 143 51.7
CDE04G2700 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 1.0e-24 120.2 90 61.1
RcHm_v2.0_Chr1g0382641 Rosa chinensis HOM05D003640 ORTHO05D004439 9.6e-23 113.6 144 53.5
RcHm_v2.0_Chr1g0382631 Rosa chinensis HOM05D003640 ORTHO05D004439 3.7e-22 111.7 311 30.5
C09p43570 Brassica napus HOM05D003640 ORTHO05D004439 6.2e-22 110.9 270 32.6
RcHm_v2.0_Chr1g0382561 Rosa chinensis HOM05D003640 ORTHO05D004439 5.3e-21 107.8 174 43.1
RcHm_v2.0_Chr1g0382611 Rosa chinensis HOM05D003640 ORTHO05D004439 6.9e-21 107.5 312 34.9
CDE07G0792 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 1.4e-18 99.8 68 67.6
unitig_37.g11993 Utricularia gibba HOM05D003640 ORTHO05D004439 1.1e-13 83.6 185 33.0
PSO782G5739 Papaver somniferum HOM05D003640 ORTHO05D004439 5.9e-12 77.8 159 35.2
Dinv06471 Davidia involucrata HOM05D003640 ORTHO05D004439 2.5e-07 62.4 141 39.7
arahy.Tifrunner.gnm1.ann1.3V8RAA Arachis hypogaea HOM05D003640 ORTHO05D004439 8.2e-06 57.4 178 26.4


User provided reference genes

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