Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0021s0018 Marchantia polymorpha HOM05D001460 ORTHO05D001337 2.4e-125 452.2 238 100.0
Pp3c6_2560 Physcomitrium patens HOM05D001460 ORTHO05D001337 9.6e-29 131.3 240 39.2
HanXRQChr03g0083921 Helianthus annuus HOM05D001460 ORTHO05D001337 3.2e-08 63.2 113 39.8
SMO172G0002 Selaginella moellendorffii HOM05D001460 ORTHO05D001337 7.1e-08 62.0 112 41.1
Cre09.g394325 Chlamydomonas reinhardtii HOM05D001460 ORTHO05D001337 1.2e-07 61.2 111 36.9
Pp3c11_7980 Physcomitrium patens HOM05D001460 ORTHO05D001337 1.2e-07 61.2 122 38.5
Gohir.A09G219300 Gossypium hirsutum HOM05D001460 ORTHO05D001337 2.1e-07 60.5 120 35.8
Gohir.D09G221500 Gossypium hirsutum HOM05D001460 ORTHO05D001337 2.1e-07 60.5 120 35.8
Pp3c3_16620 Physcomitrium patens HOM05D001460 ORTHO05D001337 2.1e-07 60.5 112 40.2
Lj3C726T2 Lonicera japonica HOM05D001460 ORTHO05D001337 2.7e-07 60.1 113 38.9
HanXRQChr03g0083901 Helianthus annuus HOM05D001460 ORTHO05D001337 3.5e-07 59.7 113 38.1
PSO017G1276 Papaver somniferum HOM05D001460 ORTHO05D001337 3.5e-07 59.7 112 40.2
PSO017G1861 Papaver somniferum HOM05D001460 ORTHO05D001337 3.5e-07 59.7 112 40.2
PSO317G0001 Papaver somniferum HOM05D001460 ORTHO05D001337 3.5e-07 59.7 112 40.2
PSO689G0001 Papaver somniferum HOM05D001460 ORTHO05D001337 3.5e-07 59.7 112 40.2
Gorai.006G242700 Gossypium raimondii HOM05D001460 ORTHO05D001337 4.6e-07 59.3 120 35.0
PSO017G2787 Papaver somniferum HOM05D001460 ORTHO05D001337 4.6e-07 59.3 112 39.3
Pp3c14_1480 Physcomitrium patens HOM05D001460 ORTHO05D001337 4.6e-07 59.3 107 37.4
Pp3c14_1501 Physcomitrium patens HOM05D001460 ORTHO05D001337 4.6e-07 59.3 107 37.4
HanXRQChr03g0083821 Helianthus annuus HOM05D001460 ORTHO05D001337 6.0e-07 58.9 112 38.4
MCO07G312 Micromonas commoda HOM05D001460 ORTHO05D049038 7.9e-07 58.5 138 35.5
Thhalv10021557m.g Eutrema salsugineum HOM05D001460 ORTHO05D001337 1.0e-06 58.2 113 38.1
HanXRQChr03g0085361 Helianthus annuus HOM05D001460 ORTHO05D001337 1.0e-06 58.2 112 37.5
HanXRQChr03g0085421 Helianthus annuus HOM05D001460 ORTHO05D001337 1.0e-06 58.2 110 37.3
PSO478G2682 Papaver somniferum HOM05D001460 ORTHO05D001337 1.0e-06 58.2 112 39.3
DCAR_030687 Daucus carota HOM05D001460 ORTHO05D001337 1.3e-06 57.8 113 38.1
DCAR_030688 Daucus carota HOM05D001460 ORTHO05D001337 1.3e-06 57.8 124 37.1
Lj3A726T24 Lonicera japonica HOM05D001460 ORTHO05D001337 1.3e-06 57.8 113 38.1
Lj3A726T25 Lonicera japonica HOM05D001460 ORTHO05D001337 1.3e-06 57.8 110 39.1
Lj3P727T10 Lonicera japonica HOM05D001460 ORTHO05D001337 1.3e-06 57.8 113 38.1
PSO017G0271 Papaver somniferum HOM05D001460 ORTHO05D001337 1.3e-06 57.8 115 40.0
Rhsim02G0029100 Rhododendron simsii HOM05D001460 ORTHO05D001337 1.3e-06 57.8 141 33.3
RhsimUnG0024300 Rhododendron simsii HOM05D001460 ORTHO05D001337 1.3e-06 57.8 141 33.3
Aqoxy5G00396 Aquilegia oxysepala HOM05D001460 ORTHO05D001337 1.8e-06 57.4 124 37.1
HanXRQChr08g0221991 Helianthus annuus HOM05D001460 ORTHO05D001337 1.8e-06 57.4 115 37.4
Lsat_1_v5_gn_6_76240 Lactuca sativa HOM05D001460 ORTHO05D001337 1.8e-06 57.4 111 38.7
Lsat_1_v5_gn_6_76700 Lactuca sativa HOM05D001460 ORTHO05D001337 1.8e-06 57.4 111 38.7
Lsat_1_v5_gn_6_76760 Lactuca sativa HOM05D001460 ORTHO05D001337 1.8e-06 57.4 111 38.7
MCO03G590 Micromonas commoda HOM05D001460 ORTHO05D001337 1.8e-06 57.4 105 39.0
Dinv14048 Davidia involucrata HOM05D001460 ORTHO05D001337 2.3e-06 57.0 109 38.5
PSO017G4466 Papaver somniferum HOM05D001460 ORTHO05D001337 2.3e-06 57.0 112 38.4
Dinv14047 Davidia involucrata HOM05D001460 ORTHO05D001337 3.0e-06 56.6 113 38.1
Lj3C726T0 Lonicera japonica HOM05D001460 ORTHO05D001337 3.0e-06 56.6 113 37.2
Lj3P727T14 Lonicera japonica HOM05D001460 ORTHO05D001337 3.0e-06 56.6 113 38.1
PRCOL_00000777 Prasinoderma coloniale HOM05D001460 ORTHO05D036796 3.0e-06 56.6 139 34.5
Rhsim02G0029200 Rhododendron simsii HOM05D001460 ORTHO05D001337 3.0e-06 56.6 121 35.5
Rhsim02G0029400 Rhododendron simsii HOM05D001460 ORTHO05D001337 3.0e-06 56.6 122 35.2
RhsimUnG0024200 Rhododendron simsii HOM05D001460 ORTHO05D001337 3.0e-06 56.6 121 35.5
AagrBONN_evm.TU.Sc2ySwM_228.2222 Anthoceros agrestis HOM05D001460 ORTHO05D001337 3.9e-06 56.2 121 36.4
BcaC01g03416 Brassica carinata HOM05D001460 ORTHO05D001337 3.9e-06 56.2 115 37.4
BcaC01g03424 Brassica carinata HOM05D001460 ORTHO05D001337 3.9e-06 56.2 113 37.2
C03p52750 Brassica napus HOM05D001460 ORTHO05D001337 3.9e-06 56.2 113 37.2
C03p52780 Brassica napus HOM05D001460 ORTHO05D001337 3.9e-06 56.2 113 37.2
Duzib151G0105 Durio zibethinus HOM05D001460 ORTHO05D001337 3.9e-06 56.2 123 33.3
HanXRQChr11g0336061 Helianthus annuus HOM05D001460 ORTHO05D001337 3.9e-06 56.2 110 36.4
HanXRQChr11g0336411 Helianthus annuus HOM05D001460 ORTHO05D001337 3.9e-06 56.2 110 36.4
Lsat_1_v5_gn_6_76441 Lactuca sativa HOM05D001460 ORTHO05D001337 3.9e-06 56.2 111 38.7
Lj3A726T23 Lonicera japonica HOM05D001460 ORTHO05D001337 3.9e-06 56.2 110 38.2
Manes.15G033100 Manihot esculenta HOM05D001460 ORTHO05D001337 3.9e-06 56.2 123 37.4
Mapoly0041s0143 Marchantia polymorpha HOM05D001460 ORTHO05D001337 3.9e-06 56.2 101 40.6
PSO017G5118 Papaver somniferum HOM05D001460 ORTHO05D001337 3.9e-06 56.2 115 38.3
Aa31LG8G9330 Aethionema arabicum HOM05D001460 ORTHO05D001337 5.1e-06 55.8 123 35.0
BcaB03g14648 Brassica carinata HOM05D001460 ORTHO05D001337 5.1e-06 55.8 113 37.2
CANSAT78G1036 Cannabis sativa HOM05D001460 ORTHO05D001337 5.1e-06 55.8 116 34.5
CANSAT78G2272 Cannabis sativa HOM05D001460 ORTHO05D001337 5.1e-06 55.8 116 34.5
CANSAT78G2478 Cannabis sativa HOM05D001460 ORTHO05D001337 5.1e-06 55.8 116 34.5
CDE02G3648 Ceratophyllum demersum HOM05D001460 ORTHO05D001337 5.1e-06 55.8 115 38.3
Cre08.g384650 Chlamydomonas reinhardtii HOM05D001460 ORTHO05D001337 5.1e-06 55.8 112 35.7
MELO3C006499.2 Cucumis melo HOM05D001460 ORTHO05D001337 5.1e-06 55.8 116 36.2
CsaV3_3G012890 Cucumis sativus L. HOM05D001460 ORTHO05D001337 5.1e-06 55.8 116 36.2
Lsat_1_v5_gn_6_75760 Lactuca sativa HOM05D001460 ORTHO05D001337 5.1e-06 55.8 110 40.0
Lsat_1_v5_gn_6_75800 Lactuca sativa HOM05D001460 ORTHO05D001337 5.1e-06 55.8 110 40.0
Mapoly0041s0138 Marchantia polymorpha HOM05D001460 ORTHO05D001337 5.1e-06 55.8 101 40.6
Mapoly0041s0139 Marchantia polymorpha HOM05D001460 ORTHO05D001337 5.1e-06 55.8 101 40.6
Mapoly0041s0141 Marchantia polymorpha HOM05D001460 ORTHO05D001337 5.1e-06 55.8 101 40.6
Mapoly0041s0142 Marchantia polymorpha HOM05D001460 ORTHO05D001337 5.1e-06 55.8 101 40.6
Mapoly0041s0144 Marchantia polymorpha HOM05D001460 ORTHO05D001337 5.1e-06 55.8 101 40.6
MCO10G318 Micromonas commoda HOM05D001460 ORTHO05D001337 5.1e-06 55.8 106 38.7
PSO017G1429 Papaver somniferum HOM05D001460 ORTHO05D001337 5.1e-06 55.8 113 39.8
PSO017G5420 Papaver somniferum HOM05D001460 ORTHO05D001337 5.1e-06 55.8 115 38.3
PSO210G0546 Papaver somniferum HOM05D001460 ORTHO05D001337 5.1e-06 55.8 115 38.3
PSO647G0001 Papaver somniferum HOM05D001460 ORTHO05D001337 5.1e-06 55.8 115 38.3
PSO675G0001 Papaver somniferum HOM05D001460 ORTHO05D001337 5.1e-06 55.8 115 38.3
PSO675G2699 Papaver somniferum HOM05D001460 ORTHO05D001337 5.1e-06 55.8 115 38.3
PSO675G4991 Papaver somniferum HOM05D001460 ORTHO05D001337 5.1e-06 55.8 115 38.3
Pp3c9_16700 Physcomitrium patens HOM05D001460 ORTHO05D001337 5.1e-06 55.8 105 39.0
Rhsim02G0028800 Rhododendron simsii HOM05D001460 ORTHO05D001337 5.1e-06 55.8 110 35.5
SEGI_13528 Sequoiadendron giganteum HOM05D001460 ORTHO05D001337 5.1e-06 55.8 112 39.3
vmacro15373 Vaccinium macrocarpon HOM05D001460 ORTHO05D001337 5.1e-06 55.8 110 38.2
AagrBONN_evm.TU.Sc2ySwM_117.1528 Anthoceros agrestis HOM05D001460 ORTHO05D001337 6.7e-06 55.5 121 36.4
Mapoly0041s0137 Marchantia polymorpha HOM05D001460 ORTHO05D001337 6.7e-06 55.5 101 39.6
Prupe.1G021600 Prunus persica HOM05D001460 ORTHO05D001337 6.7e-06 55.5 110 35.5
MD06G1134100 Malus domestica HOM05D001460 ORTHO05D001337 8.7e-06 55.1 114 36.8
MD13G1200100 Malus domestica HOM05D001460 ORTHO05D001337 8.7e-06 55.1 121 33.1
Mapoly0041s0145 Marchantia polymorpha HOM05D001460 ORTHO05D001337 8.7e-06 55.1 101 39.6
PRCOL_00006120 Prasinoderma coloniale HOM05D001460 ORTHO05D001337 8.7e-06 55.1 116 37.9
SEGI_16081 Sequoiadendron giganteum HOM05D001460 ORTHO05D001337 8.7e-06 55.1 110 37.3
THA.LOC104803047 Tarenaya hassleriana HOM05D001460 ORTHO05D001337 8.7e-06 55.1 112 38.4
TWI73G0287 Tripterygium wilfordii HOM05D001460 ORTHO05D001337 8.7e-06 55.1 110 37.3


User provided reference genes

Program Settings