Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0021s0016 Marchantia polymorpha HOM05D003884 ORTHO05D004482 3.8e-85 318.2 163 100.0
AagrBONN_evm.TU.Sc2ySwM_368.3177 Anthoceros agrestis HOM05D003884 ORTHO05D004482 2.8e-19 99.4 166 38.6
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 2.0e-09 66.6 94 36.2
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 3.4e-09 65.9 96 35.4
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 4.4e-09 65.5 94 37.2
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 5.8e-09 65.1 94 35.1
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 5.8e-09 65.1 94 35.1
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 7.5e-09 64.7 94 33.0
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 9.8e-09 64.3 101 33.7
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 9.8e-09 64.3 95 34.7
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 2.9e-08 62.8 129 31.0
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.9e-08 62.8 129 31.0
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 3.7e-08 62.4 95 32.6
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 3.7e-08 62.4 129 30.2
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 4.9e-08 62.0 95 31.6
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 8.3e-08 61.2 95 33.7
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 8.3e-08 61.2 96 34.4
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 1.1e-07 60.8 95 30.5
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 1.1e-07 60.8 95 30.5
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.4e-07 60.5 152 27.6
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 1.4e-07 60.5 158 27.8
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 1.4e-07 60.5 95 33.7
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 1.4e-07 60.5 95 32.6
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 2.4e-07 59.7 128 29.7
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 3.2e-07 59.3 166 27.7
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 3.2e-07 59.3 107 29.9
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 3.2e-07 59.3 149 27.5
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 4.1e-07 58.9 96 33.3
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 5.4e-07 58.5 120 30.8
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.2e-06 57.4 96 31.2
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 1.2e-06 57.4 147 27.2
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 4.6e-06 55.5 163 28.8
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 7.8e-06 54.7 98 33.7
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 7.8e-06 54.7 163 28.8


User provided reference genes

Program Settings