Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0020s0159 Marchantia polymorpha HOM05D003500 ORTHO05D003919 3.3e-162 575.1 310 100.0
AagrBONN_evm.TU.Sc2ySwM_344.4669 Anthoceros agrestis HOM05D003500 ORTHO05D003919 1.2e-20 104.8 323 31.0
Pp3c2_32720 Physcomitrium patens HOM05D003500 ORTHO05D003919 5.8e-18 95.9 316 28.5
CiPaw.07G208500 Carya illinoinensis HOM05D003500 ORTHO05D003919 1.6e-12 77.8 309 26.9
Hma1.2p1_0140F.1_g063720 Hydrangea macrophylla HOM05D003500 ORTHO05D003919 4.8e-12 76.3 314 29.0
THA.LOC104818564 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 6.9e-11 72.4 300 26.7
TAR624G1157 Trochodendron aralioides HOM05D003500 ORTHO05D003919 6.9e-11 72.4 308 26.6
Gohir.D07G028000 Gossypium hirsutum HOM05D003500 ORTHO05D003919 1.2e-10 71.6 305 28.5
Gorai.001G029300 Gossypium raimondii HOM05D003500 ORTHO05D003919 1.2e-10 71.6 294 29.6
Carub.0007s0785 Capsella rubella HOM05D003500 ORTHO05D003919 2.6e-10 70.5 299 27.1
Haze_21819 Corylus avellana HOM05D003500 ORTHO05D003919 9.9e-10 68.6 321 28.0
Rhsim07G0154900 Rhododendron simsii HOM05D003500 ORTHO05D003919 1.3e-09 68.2 307 28.3
Prupe.1G454700 Prunus persica HOM05D003500 ORTHO05D003919 1.7e-09 67.8 304 28.6
AT4G32680 Arabidopsis thaliana HOM05D003500 ORTHO05D003919 2.2e-09 67.4 301 27.6
QL12p026085 Quercus lobata HOM05D003500 ORTHO05D003919 2.2e-09 67.4 306 27.1
C06p07810 Brassica napus HOM05D003500 ORTHO05D003919 2.9e-09 67.0 291 27.1
Gohir.A07G024400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 4.9e-09 66.2 303 26.7
Potri.018G035800 Populus trichocarpa HOM05D003500 ORTHO05D003919 4.9e-09 66.2 295 26.1
Lj8A606T22 Lonicera japonica HOM05D003500 ORTHO05D003919 6.4e-09 65.9 304 27.6
RcHm_v2.0_Chr6g0305551 Rosa chinensis HOM05D003500 ORTHO05D003919 6.4e-09 65.9 302 24.5
arahy.Tifrunner.gnm1.ann1.V41S3G Arachis hypogaea HOM05D003500 ORTHO05D003919 8.4e-09 65.5 301 26.6
CARHR240660 Cardamine hirsuta HOM05D003500 ORTHO05D003919 1.1e-08 65.1 290 27.2
BolC6t35867H Brassica oleracea HOM05D003500 ORTHO05D003919 1.4e-08 64.7 291 27.1
Sabra18G0036300 Salix brachista HOM05D003500 ORTHO05D003919 2.4e-08 63.9 295 26.1
Cfa013328 Carpinus fangiana HOM05D003500 ORTHO05D003919 3.2e-08 63.5 325 24.6
HanXRQChr01g0029371 Helianthus annuus HOM05D003500 ORTHO05D003919 4.2e-08 63.2 304 27.0
A01p05660 Brassica napus HOM05D003500 ORTHO05D003919 9.3e-08 62.0 299 27.1
A06p01860 Brassica napus HOM05D003500 ORTHO05D003919 9.3e-08 62.0 291 26.8
Thhalv10012010m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 9.3e-08 62.0 288 27.1
MD15G1099900 Malus domestica HOM05D003500 ORTHO05D003919 9.3e-08 62.0 309 27.5
SGA_v2.0_scaffold169G38640 Striga asiatica HOM05D003500 ORTHO05D003919 1.2e-07 61.6 295 27.8
CAN.G886.10 Capsicum annuum HOM05D003500 ORTHO05D003919 1.6e-07 61.2 312 26.6
BraA08t33760Z Brassica rapa HOM05D003500 ORTHO05D003919 2.1e-07 60.8 297 26.3
ClCG08G012430 Citrullus lanatus HOM05D003500 ORTHO05D003919 2.1e-07 60.8 302 27.8
Thhalv10025931m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 2.1e-07 60.8 295 26.4
PSO782G3147 Papaver somniferum HOM05D003500 ORTHO05D003919 2.1e-07 60.8 148 31.8
HPP92_005532 Vanilla planifolia HOM05D003500 ORTHO05D003919 2.1e-07 60.8 291 25.4
BolC1t00621H Brassica oleracea HOM05D003500 ORTHO05D003919 3.5e-07 60.1 289 26.6
BraA06t23403Z Brassica rapa HOM05D003500 ORTHO05D003919 3.5e-07 60.1 291 26.8
CsaV3_2G031120 Cucumis sativus L. HOM05D003500 ORTHO05D003919 4.6e-07 59.7 314 25.8
FAN20G2191 Fragaria x ananassa HOM05D003500 ORTHO05D003919 4.6e-07 59.7 295 25.4
arahy.Tifrunner.gnm1.ann1.HR3BJH Arachis hypogaea HOM05D003500 ORTHO05D003919 7.9e-07 58.9 310 25.2
TWI32G0121 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 7.9e-07 58.9 296 23.3
ATR0051G010 Amborella trichopoda HOM05D003500 ORTHO05D003919 1.0e-06 58.5 173 28.3
C03p87180 Brassica napus HOM05D003500 ORTHO05D003919 1.0e-06 58.5 296 27.4
BolC3t21020H Brassica oleracea HOM05D003500 ORTHO05D003919 1.0e-06 58.5 296 27.4
Aa31LG2G16940 Aethionema arabicum HOM05D003500 ORTHO05D003919 1.3e-06 58.2 304 25.7
AL7G19060 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 1.3e-06 58.2 300 26.3
MSTRG.14007 Avicennia marina HOM05D003500 ORTHO05D003919 1.3e-06 58.2 307 25.1
Ciclev10027012m.g Citrus clementina HOM05D003500 ORTHO05D003919 1.3e-06 58.2 306 29.4
Sp7g30440 Schrenkiella parvula HOM05D003500 ORTHO05D003919 1.3e-06 58.2 302 28.5
BcaB03g12755 Brassica carinata HOM05D003500 ORTHO05D003919 1.8e-06 57.8 297 25.9
Duzib187G1538 Durio zibethinus HOM05D003500 ORTHO05D003919 1.8e-06 57.8 316 25.9
BcaC01g01007 Brassica carinata HOM05D003500 ORTHO05D003919 2.3e-06 57.4 294 25.2
MELO3C011162.2 Cucumis melo HOM05D003500 ORTHO05D003919 2.3e-06 57.4 309 25.2
CANSAT35G1218 Cannabis sativa HOM05D003500 ORTHO05D003919 3.0e-06 57.0 306 26.5
Nitab4.5_0002393g0050 Nicotiana tabacum HOM05D003500 ORTHO05D003919 3.0e-06 57.0 309 25.9
Ciclev10009124m.g Citrus clementina HOM05D003500 ORTHO05D003919 3.9e-06 56.6 303 25.4
Solyc08g068060.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 3.9e-06 56.6 310 26.5
Dinv14210 Davidia involucrata HOM05D003500 ORTHO05D003919 5.1e-06 56.2 310 27.7
FvH4_2g36330 Fragaria vesca HOM05D003500 ORTHO05D003919 5.1e-06 56.2 295 24.4
Carub.0001s4135 Capsella rubella HOM05D003500 ORTHO05D003919 8.7e-06 55.5 290 25.5
AUR62032393 Chenopodium quinoa HOM05D003500 ORTHO05D003919 8.7e-06 55.5 298 27.9


User provided reference genes

Program Settings