Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0020s0094 Marchantia polymorpha HOM05D007702 ORTHO05D009736 2.6e-192 675.2 343 100.0
Pp3c5_18880 Physcomitrium patens HOM05D007702 ORTHO05D009736 6.8e-52 208.8 253 47.0
AagrBONN_evm.TU.Sc2ySwM_228.5746 Anthoceros agrestis HOM05D007702 ORTHO05D009736 5.4e-41 172.6 241 41.9
Aqoxy7G02739 Aquilegia oxysepala HOM05D007702 ORTHO05D009736 7.1e-33 145.6 231 37.7
EL10Ac7g18156 Beta vulgaris HOM05D007702 ORTHO05D009736 1.0e-31 141.7 235 36.6
BcaB07g33554 Brassica carinata HOM05D007702 ORTHO05D009736 1.1e-30 138.3 234 38.0
AUR62001339 Chenopodium quinoa HOM05D007702 ORTHO05D009736 4.3e-30 136.3 231 36.4
ClCG09G001650 Citrullus lanatus HOM05D007702 ORTHO05D009736 1.2e-29 134.8 236 37.3
Aa31LG10G3400 Aethionema arabicum HOM05D007702 ORTHO05D009736 2.1e-29 134.0 216 37.5
Manes.06G177600 Manihot esculenta HOM05D007702 ORTHO05D009736 3.6e-29 133.3 220 37.3
Cc03_g07590 Coffea canephora HOM05D007702 ORTHO05D009736 6.2e-29 132.5 164 42.1
CsaV3_7G033690 Cucumis sativus L. HOM05D007702 ORTHO05D009736 6.2e-29 132.5 225 35.6
Cpa.g.sc155.12 Carica papaya HOM05D007702 ORTHO05D009736 8.1e-29 132.1 222 34.7
Haze_08173 Corylus avellana HOM05D007702 ORTHO05D009736 8.1e-29 132.1 228 33.8
Ah.08g217790 Amaranthus hybridus HOM05D007702 ORTHO05D009736 1.1e-28 131.7 234 35.0
A06p02690 Brassica napus HOM05D007702 ORTHO05D009736 1.1e-28 131.7 221 38.5
Nn2g12749 Nelumbo nucifera HOM05D007702 ORTHO05D009736 1.1e-28 131.7 119 51.3
BcaC08g43279 Brassica carinata HOM05D007702 ORTHO05D009736 1.8e-28 131.0 221 38.5
C06p06290 Brassica napus HOM05D007702 ORTHO05D009736 1.8e-28 131.0 221 38.5
BolC6t35738H Brassica oleracea HOM05D007702 ORTHO05D009736 1.8e-28 131.0 221 38.5
Carub.0001s3998 Capsella rubella HOM05D007702 ORTHO05D009736 1.8e-28 131.0 231 36.4
Cfa012496 Carpinus fangiana HOM05D007702 ORTHO05D009736 1.8e-28 131.0 231 33.8
CiPaw.11G097300 Carya illinoinensis HOM05D007702 ORTHO05D009736 2.4e-28 130.6 245 35.5
BraA06t23478Z Brassica rapa HOM05D007702 ORTHO05D009736 3.1e-28 130.2 220 38.6
DCAR_007958 Daucus carota HOM05D007702 ORTHO05D009736 3.1e-28 130.2 235 34.0
Eucgr.J03180 Eucalyptus grandis HOM05D007702 ORTHO05D009736 3.1e-28 130.2 211 34.1
arahy.Tifrunner.gnm1.ann1.TT2UX9 Arachis hypogaea HOM05D007702 ORTHO05D009736 4.0e-28 129.8 226 35.8
Thhalv10012117m.g Eutrema salsugineum HOM05D007702 ORTHO05D009736 4.0e-28 129.8 224 37.5
Migut.I01200 Erythranthe guttata HOM05D007702 ORTHO05D009736 5.2e-28 129.4 157 42.7
Nitab4.5_0006053g0030 Nicotiana tabacum HOM05D007702 ORTHO05D009736 5.2e-28 129.4 130 47.7
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 5.2e-28 129.4 229 34.1
CDE05G1247 Ceratophyllum demersum HOM05D007702 ORTHO05D009736 6.8e-28 129.0 271 32.1
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 8.9e-28 128.6 152 44.7
Duzib235G0870 Durio zibethinus HOM05D007702 ORTHO05D009736 8.9e-28 128.6 224 34.8
MBI07_g12934_MAGBIO Magnolia biondii HOM05D007702 ORTHO05D009736 8.9e-28 128.6 220 37.3
Peaxi162Scf00051g00198 Petunia axillaris HOM05D007702 ORTHO05D009736 1.2e-27 128.3 214 36.0
AUR62025666 Chenopodium quinoa HOM05D007702 ORTHO05D009736 1.5e-27 127.9 210 37.1
Nitab4.5_0010634g0010 Nicotiana tabacum HOM05D007702 ORTHO05D009736 1.5e-27 127.9 122 47.5
Psat5g305320 Pisum sativum HOM05D007702 ORTHO05D009736 1.5e-27 127.9 228 36.8
Thecc.06G057000 Theobroma cacao HOM05D007702 ORTHO05D009736 2.0e-27 127.5 251 33.5
CARHR041100 Cardamine hirsuta HOM05D007702 ORTHO05D009736 2.6e-27 127.1 223 37.7
AT1G51080 Arabidopsis thaliana HOM05D007702 ORTHO05D009736 3.4e-27 126.7 225 36.0
Ciclev10032212m.g Citrus clementina HOM05D007702 ORTHO05D009736 4.4e-27 126.3 130 47.7
TAR383G0542 Trochodendron aralioides HOM05D007702 ORTHO05D009736 4.4e-27 126.3 157 43.3
unitig_748.g7485 Utricularia gibba HOM05D007702 ORTHO05D009736 4.4e-27 126.3 212 36.8
Prupe.3G023000 Prunus persica HOM05D007702 ORTHO05D009736 5.8e-27 125.9 123 48.8
SGA_v2.0_scaffold71G23985 Striga asiatica HOM05D007702 ORTHO05D009736 7.6e-27 125.6 162 38.9
ATR1126G014 Amborella trichopoda HOM05D007702 ORTHO05D009736 9.9e-27 125.2 121 45.5
Solyc01g102860.2 Solanum lycopersicum HOM05D007702 ORTHO05D009736 9.9e-27 125.2 259 32.4
Gohir.A10G002000 Gossypium hirsutum HOM05D007702 ORTHO05D009736 1.7e-26 124.4 225 34.7
PGSC0003DMG400018255 Solanum tuberosum HOM05D007702 ORTHO05D009736 1.7e-26 124.4 226 33.6
AL1G58880 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 4.9e-26 122.9 225 35.1
Gohir.D10G002100 Gossypium hirsutum HOM05D007702 ORTHO05D009736 6.4e-26 122.5 226 33.2
PGR042G2668 Punica granatum HOM05D007702 ORTHO05D009736 6.4e-26 122.5 119 48.7
Gorai.011G002500 Gossypium raimondii HOM05D007702 ORTHO05D009736 8.4e-26 122.1 228 34.6
CANSAT54G2309 Cannabis sativa HOM05D007702 ORTHO05D009736 1.1e-25 121.7 147 42.2
MELO3C024282.2 Cucumis melo HOM05D007702 ORTHO05D009736 1.1e-25 121.7 244 33.2
CSS0020400 Camellia sinensis var. sinensis HOM05D007702 ORTHO05D009736 1.4e-25 121.3 126 43.7
MD09G1165300 Malus domestica HOM05D007702 ORTHO05D009736 1.4e-25 121.3 123 47.2
Lsat_1_v5_gn_1_39381 Lactuca sativa HOM05D007702 ORTHO05D009736 2.4e-25 120.6 126 47.6
Sopen01g045260 Solanum pennellii HOM05D007702 ORTHO05D009736 2.4e-25 120.6 219 33.3
Potri.008G004800 Populus trichocarpa HOM05D007702 ORTHO05D009736 5.4e-25 119.4 234 32.9
Os03g0138900 Oryza sativa ssp. japonica HOM05D007702 ORTHO05D009736 7.1e-25 119.0 233 33.0
CANSAT54G1387 Cannabis sativa HOM05D007702 ORTHO05D009736 9.3e-25 118.6 215 35.3
FvH4_6g36940 Fragaria vesca HOM05D007702 ORTHO05D009736 9.3e-25 118.6 124 46.0
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 9.3e-25 118.6 124 46.0
RcHm_v2.0_Chr2g0149381 Rosa chinensis HOM05D007702 ORTHO05D009736 1.6e-24 117.9 117 47.9
Sp1g37800 Schrenkiella parvula HOM05D007702 ORTHO05D009736 1.6e-24 117.9 229 34.5
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.1e-24 117.5 221 33.5
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.7e-24 117.1 115 48.7
Sabra08G0002400 Salix brachista HOM05D007702 ORTHO05D009736 3.5e-24 116.7 233 33.5
GSVIVG01029550001 Vitis vinifera HOM05D007702 ORTHO05D009736 3.5e-24 116.7 122 45.9
Ca_00991_v3 Cicer arietinum L. HOM05D007702 ORTHO05D009736 6.0e-24 115.9 128 43.0
THA.LOC104817895 Tarenaya hassleriana HOM05D007702 ORTHO05D009736 7.8e-24 115.5 218 34.4
Atru.chr1.2666 Acer truncatum HOM05D007702 ORTHO05D009736 1.0e-23 115.2 132 46.2
CAN.G2401.1 Capsicum annuum HOM05D000005 ORTHO05D000012 1.0e-23 115.2 113 46.0
COL.COLO4_31154 Corchorus olitorius HOM05D007702 ORTHO05D009736 3.0e-23 113.6 203 33.5
vmacro18744 Vaccinium macrocarpon HOM05D007702 ORTHO05D009736 5.1e-23 112.8 126 45.2
Oeu049633.1 Olea europaea HOM05D007702 ORTHO05D009736 1.9e-22 110.9 205 33.2
Medtr2g101430 Medicago truncatula HOM05D007702 ORTHO05D009736 3.3e-22 110.2 220 31.8
TPR.G39495 Trifolium pratense HOM05D007702 ORTHO05D009736 3.3e-22 110.2 122 44.3
ECA236G1927 Erigeron canadensis HOM05D007702 ORTHO05D009736 2.1e-21 107.5 214 35.0
QL12p001257 Quercus lobata HOM05D007702 ORTHO05D009736 2.8e-21 107.1 209 31.6
SEGI_14624 Sequoiadendron giganteum HOM05D007702 ORTHO05D009736 2.8e-21 107.1 231 32.9
SalBow6G4959 Salvia bowleyana HOM05D007702 ORTHO05D009736 5.3e-20 102.8 123 43.9
Rhsim08G0250300 Rhododendron simsii HOM05D007702 ORTHO05D009736 2.6e-19 100.5 231 32.5
PSO144G0036 Papaver somniferum HOM05D007702 ORTHO05D009736 4.9e-18 96.3 174 33.3
PSO423G0097 Papaver somniferum HOM05D007702 ORTHO05D009736 6.4e-18 95.9 104 43.3
Aa31LG6G10000 Aethionema arabicum HOM05D007702 ORTHO05D009736 3.2e-17 93.6 133 39.8
EL10Ac3g06847 Beta vulgaris HOM05D000495 ORTHO05D009736 3.5e-16 90.1 126 44.4
Zm00001eb230260 Zea mays HOM05D007702 ORTHO05D009736 3.5e-16 90.1 249 29.3
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 3.1e-12 77.0 89 40.4
Gorai.011G091300 Gossypium raimondii HOM05D007702 ORTHO05D009736 5.3e-12 76.3 99 38.4
Aa31LG3G5120 Aethionema arabicum HOM05D007702 ORTHO05D009736 1.5e-11 74.7 107 35.5
Dinv37777 Davidia involucrata HOM05D000532 ORTHO05D002745 4.3e-06 56.6 45 53.3


User provided reference genes

Program Settings