Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0020s0032 Marchantia polymorpha HOM05D004302 ORTHO05D030094 1.1e-267 926.0 457 100.0
Mapoly0114s0044 Marchantia polymorpha HOM05D002809 ORTHO05D030094 3.8e-58 229.9 464 34.9
Mapoly0114s0043 Marchantia polymorpha HOM05D002809 ORTHO05D030094 9.1e-52 208.8 324 40.4
Mapoly0114s0047 Marchantia polymorpha HOM05D004302 ORTHO05D030094 6.1e-48 196.1 466 32.2
Mapoly0081s0010 Marchantia polymorpha HOM05D048736 ORTHO05D048752 2.1e-16 91.3 314 28.3
Mapoly0055s0081 Marchantia polymorpha HOM05D003005 ORTHO05D004939 8.0e-16 89.4 405 25.2
Pp3c11_18710 Physcomitrium patens HOM05D004302 ORTHO05D004939 3.0e-15 87.4 309 27.8
Mapoly0002s0187 Marchantia polymorpha HOM05D002809 ORTHO05D004563 4.9e-13 80.1 362 21.8
Mapoly0021s0046 Marchantia polymorpha HOM05D035083 ORTHO05D036668 1.8e-12 78.2 418 25.1
SMO361G0323 Selaginella moellendorffii HOM05D002809 ORTHO05D004939 1.8e-12 78.2 282 25.2
Mapoly0005s0140 Marchantia polymorpha HOM05D002809 ORTHO05D004563 5.4e-12 76.6 183 27.9
Mapoly0072s0056 Marchantia polymorpha HOM05D004302 ORTHO05D004939 5.4e-12 76.6 260 27.7
Mapoly0270s0001 Marchantia polymorpha HOM05D035083 ORTHO05D036668 9.2e-12 75.9 403 24.6
Mapoly0066s0008 Marchantia polymorpha HOM05D004302 ORTHO05D017280 1.2e-11 75.5 326 22.7
Pp3c14_23730 Physcomitrium patens HOM05D002809 ORTHO05D004563 3.5e-11 73.9 280 27.5
Lsat_1_v5_gn_3_30801 Lactuca sativa HOM05D002809 ORTHO05D004563 5.0e-10 70.1 196 28.1
Mapoly0170s0023 Marchantia polymorpha HOM05D002809 ORTHO05D004563 1.5e-09 68.6 432 22.2
SEGI_07480 Sequoiadendron giganteum HOM05D005977 ORTHO05D004563 1.5e-09 68.6 309 24.3
Mapoly0019s0019 Marchantia polymorpha HOM05D002809 ORTHO05D004563 1.9e-09 68.2 186 26.3
Pp3c19_15800 Physcomitrium patens HOM05D007753 ORTHO05D009385 2.5e-09 67.8 235 24.3
Mapoly0137s0025 Marchantia polymorpha HOM05D004302 ORTHO05D004939 4.3e-09 67.0 213 29.6
SMO116G0409 Selaginella moellendorffii HOM05D002809 ORTHO05D004563 4.3e-09 67.0 355 20.0
SMO239G0172 Selaginella moellendorffii HOM05D003005 ORTHO05D004563 4.3e-09 67.0 305 23.6
Nn5g28167 Nelumbo nucifera HOM05D002809 ORTHO05D004939 9.5e-09 65.9 290 24.8
Atru.chr7.1810 Acer truncatum HOM05D006415 ORTHO05D008549 1.2e-08 65.5 182 22.0
TWI32G1144 Tripterygium wilfordii HOM05D006415 ORTHO05D008549 3.6e-08 63.9 178 24.7
Mapoly0014s0188 Marchantia polymorpha HOM05D002809 ORTHO05D004563 4.7e-08 63.5 211 26.1
Pp3c22_14550 Physcomitrium patens HOM05D002809 ORTHO05D009385 6.1e-08 63.2 241 24.9
HanXRQChr05g0128691 Helianthus annuus HOM05D002809 ORTHO05D004563 1.8e-07 61.6 235 24.3
MSTRG.10171 Avicennia marina HOM05D007162 ORTHO05D007631 2.3e-07 61.2 305 23.3
Actinidia34692 Actinidia chinensis HOM05D005977 ORTHO05D007546 5.2e-07 60.1 376 22.6
Pp3c1_27000 Physcomitrium patens HOM05D002809 ORTHO05D004563 6.8e-07 59.7 129 27.1
Migut.G00033 Erythranthe guttata HOM05D007162 ORTHO05D007631 2.6e-06 57.8 265 24.5
CsaV3_4G036270 Cucumis sativus L. HOM05D006415 ORTHO05D008549 4.4e-06 57.0 183 23.5
Migut.G00030 Erythranthe guttata HOM05D007162 ORTHO05D007631 4.4e-06 57.0 265 24.2


User provided reference genes

Program Settings