Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0020s0023 Marchantia polymorpha HOM05D001245 ORTHO05D255746 3.1e-98 361.7 170 100.0
Mapoly0020s0027 Marchantia polymorpha HOM05D001245 ORTHO05D005230 3.5e-09 65.9 147 36.7
BcaC05g26081 Brassica carinata HOM05D001245 ORTHO05D005230 5.1e-08 62.0 129 36.4
Lsat_1_v5_gn_4_133761 Lactuca sativa HOM05D001245 ORTHO05D005230 6.7e-08 61.6 142 35.2
HanXRQChr09g0260671 Helianthus annuus HOM05D001245 ORTHO05D005230 1.9e-07 60.1 142 35.2
Dinv27279 Davidia involucrata HOM05D001245 ORTHO05D005230 2.5e-07 59.7 142 35.2
ECA232G2648 Erigeron canadensis HOM05D001245 ORTHO05D005230 3.3e-07 59.3 142 35.2
Lj1g0027388 Lotus japonicus HOM05D001245 ORTHO05D005230 3.3e-07 59.3 142 34.5
Medtr1g029620 Medicago truncatula HOM05D001245 ORTHO05D005230 7.4e-07 58.2 147 33.3
arahy.Tifrunner.gnm1.ann1.XY3TEF Arachis hypogaea HOM05D001245 ORTHO05D005230 1.3e-06 57.4 142 34.5
Carub.0001s2106 Capsella rubella HOM05D001245 ORTHO05D005230 1.3e-06 57.4 142 33.8
Thhalv10006690m.g Eutrema salsugineum HOM05D001245 ORTHO05D005230 1.3e-06 57.4 142 33.8
HanXRQChr11g0326051 Helianthus annuus HOM05D001245 ORTHO05D005230 1.3e-06 57.4 142 33.8
SalBow7G3837 Salvia bowleyana HOM05D001245 ORTHO05D005230 1.3e-06 57.4 142 33.8
SalBow7G3974 Salvia bowleyana HOM05D001245 ORTHO05D005230 1.3e-06 57.4 142 33.8
Sp1g19160 Schrenkiella parvula HOM05D001245 ORTHO05D005230 1.3e-06 57.4 142 33.8
SGA_v2.0_scaffold52G18927 Striga asiatica HOM05D001245 ORTHO05D005230 1.3e-06 57.4 142 34.5
Ca_12648_v3 Cicer arietinum L. HOM05D001245 ORTHO05D005230 1.6e-06 57.0 147 32.7
Manes.18G082200 Manihot esculenta HOM05D001245 ORTHO05D005230 1.6e-06 57.0 142 33.8
Medtr3g088575 Medicago truncatula HOM05D001245 ORTHO05D005230 1.6e-06 57.0 142 33.8
Nn1g08964 Nelumbo nucifera HOM05D001245 ORTHO05D005230 1.6e-06 57.0 142 33.8
Psat6g040280 Pisum sativum HOM05D001245 ORTHO05D005230 1.6e-06 57.0 151 34.4
TWI60G0016 Tripterygium wilfordii HOM05D001245 ORTHO05D005230 1.6e-06 57.0 142 33.8
GSVIVG01008810001 Vitis vinifera HOM05D001245 ORTHO05D005230 1.6e-06 57.0 142 34.5
BcaB07g32157 Brassica carinata HOM05D001245 ORTHO05D005230 2.1e-06 56.6 142 33.8
A06p17710 Brassica napus HOM05D001245 ORTHO05D005230 2.1e-06 56.6 142 33.8
C05p20610 Brassica napus HOM05D001245 ORTHO05D005230 2.1e-06 56.6 142 33.8
Phvul.001G070700 Phaseolus vulgaris HOM05D001245 ORTHO05D005230 2.1e-06 56.6 142 33.8
TPR.G13467 Trifolium pratense HOM05D001245 ORTHO05D005230 2.1e-06 56.6 142 33.8
TPR.G30568 Trifolium pratense HOM05D001245 ORTHO05D005230 2.1e-06 56.6 147 32.7
Aa31LG7G5610 Aethionema arabicum HOM05D001245 ORTHO05D005230 2.8e-06 56.2 142 33.8
EL10Ac1g01342 Beta vulgaris HOM05D001245 ORTHO05D005230 2.8e-06 56.2 142 33.8
Ca_16606_v3 Cicer arietinum L. HOM05D003077 ORTHO05D005230 2.8e-06 56.2 142 33.8
Dinv14681 Davidia involucrata HOM05D001245 ORTHO05D005230 2.8e-06 56.2 142 33.8
Prupe.1G489900 Prunus persica HOM05D001245 ORTHO05D005230 2.8e-06 56.2 142 33.8
AL1G34780 Arabidopsis lyrata HOM05D001245 ORTHO05D005230 3.7e-06 55.8 142 33.8
arahy.Tifrunner.gnm1.ann1.H3TQMF Arachis hypogaea HOM05D001245 ORTHO05D005230 3.7e-06 55.8 142 33.1
arahy.Tifrunner.gnm1.ann1.Q6HWVM Arachis hypogaea HOM05D001245 ORTHO05D005230 3.7e-06 55.8 142 33.8
CANSAT25G3405 Cannabis sativa HOM05D001245 ORTHO05D005230 3.7e-06 55.8 142 33.8
CARHR021990 Cardamine hirsuta HOM05D001245 ORTHO05D005230 3.7e-06 55.8 142 33.8
Cfa018126 Carpinus fangiana HOM05D001245 ORTHO05D005230 3.7e-06 55.8 142 33.1
CiPaw.16G023000 Carya illinoinensis HOM05D001245 ORTHO05D005230 3.7e-06 55.8 142 34.5
Ciclev10000146m.g Citrus clementina HOM05D001245 ORTHO05D005230 3.7e-06 55.8 142 33.1
THA.LOC104800233 Tarenaya hassleriana HOM05D001245 ORTHO05D005230 3.7e-06 55.8 142 33.8
THA.LOC104810241 Tarenaya hassleriana HOM05D001245 ORTHO05D005230 3.7e-06 55.8 142 33.8
Zm00001eb091060 Zea mays HOM05D001245 ORTHO05D005230 3.7e-06 55.8 147 30.6
MD08G1160800 Malus domestica HOM05D001245 ORTHO05D005230 4.8e-06 55.5 142 33.8
Os11g0191400 Oryza sativa ssp. japonica HOM05D001245 ORTHO05D005230 4.8e-06 55.5 147 30.6
Peaxi162Scf00051g02115 Petunia axillaris HOM05D001245 ORTHO05D005230 4.8e-06 55.5 142 33.1
Hund17340 Selenicereus undatus HOM05D001245 ORTHO05D005230 4.8e-06 55.5 143 34.3
unitig_46.g18089 Utricularia gibba HOM05D001245 ORTHO05D005230 4.8e-06 55.5 142 33.8
AUR62007719 Chenopodium quinoa HOM05D001245 ORTHO05D005230 6.2e-06 55.1 142 33.8
AUR62013423 Chenopodium quinoa HOM05D001245 ORTHO05D005230 6.2e-06 55.1 142 33.8
Migut.C01062 Erythranthe guttata HOM05D001245 ORTHO05D005230 6.2e-06 55.1 142 33.1
Phvul.009G129700 Phaseolus vulgaris HOM05D001245 ORTHO05D005230 6.2e-06 55.1 145 32.4
Psat5g084880 Pisum sativum HOM05D001245 ORTHO05D005230 6.2e-06 55.1 142 33.1
SMO196G0088 Selaginella moellendorffii HOM05D001245 ORTHO05D005230 6.2e-06 55.1 143 34.3
Hund26775 Selenicereus undatus HOM05D001245 ORTHO05D005230 6.2e-06 55.1 142 33.8
MSTRG.25362 Avicennia marina HOM05D001245 ORTHO05D005230 8.1e-06 54.7 142 33.8
CAN.G531.6 Capsicum annuum HOM05D001245 ORTHO05D005230 8.1e-06 54.7 142 33.1
Glyma.06G117300 Glycine max HOM05D001245 ORTHO05D005230 8.1e-06 54.7 142 33.1
Glyma.13G032400 Glycine max HOM05D001245 ORTHO05D005230 8.1e-06 54.7 142 33.8
Glyma.14G154600 Glycine max HOM05D001245 ORTHO05D005230 8.1e-06 54.7 142 33.8
Lj1g0024618 Lotus japonicus HOM05D001245 ORTHO05D005230 8.1e-06 54.7 142 33.8
Sed0026204 Sechium edule HOM05D001245 ORTHO05D005230 8.1e-06 54.7 142 33.1


User provided reference genes

Program Settings