Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0019s0119 Marchantia polymorpha HOM05D001447 ORTHO05D005923 0.0e+00 1329.7 684 100.0
SEGI_16617 Sequoiadendron giganteum HOM05D001447 ORTHO05D005923 7.5e-26 123.2 425 26.4
SEGI_06958 Sequoiadendron giganteum HOM05D001447 ORTHO05D005923 1.3e-22 112.5 397 28.7
GSVIVG01031554001 Vitis vinifera HOM05D001447 ORTHO05D005923 1.8e-16 92.0 322 27.6
Cfa009826 Carpinus fangiana HOM05D001447 ORTHO05D008204 2.0e-15 88.6 324 26.2
Gohir.D09G108100 Gossypium hirsutum HOM05D001447 ORTHO05D005923 5.9e-15 87.0 315 24.8
Gorai.006G125800 Gossypium raimondii HOM05D001447 ORTHO05D005923 7.8e-15 86.7 315 24.8
Nn2g15058 Nelumbo nucifera HOM05D001447 ORTHO05D005923 1.0e-14 86.3 319 29.2
Thecc.09G241000 Theobroma cacao HOM05D001447 ORTHO05D005923 1.0e-14 86.3 315 26.0
TWI23G0345 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 1.0e-14 86.3 336 26.8
Medtr8g059560 Medicago truncatula HOM05D001447 ORTHO05D005923 1.7e-14 85.5 317 28.1
Gohir.A09G111500 Gossypium hirsutum HOM05D001447 ORTHO05D005923 2.3e-14 85.1 315 24.8
TPR.G26927 Trifolium pratense HOM05D001447 ORTHO05D005923 3.0e-14 84.7 326 26.7
Manes.09G003800 Manihot esculenta HOM05D001447 ORTHO05D005923 5.0e-14 84.0 326 26.7
Medtr7g075050 Medicago truncatula HOM05D001447 ORTHO05D005923 5.0e-14 84.0 325 27.4
Prupe.4G257000 Prunus persica HOM05D001447 ORTHO05D005923 8.6e-14 83.2 314 25.5
CiPaw.13G153600 Carya illinoinensis HOM05D001447 ORTHO05D005923 1.1e-13 82.8 315 25.1
Haze_23187 Corylus avellana HOM05D001447 ORTHO05D005923 1.1e-13 82.8 321 26.5
arahy.Tifrunner.gnm1.ann1.Q3UL2U Arachis hypogaea HOM05D001447 ORTHO05D005923 4.3e-13 80.9 328 27.1
CANSAT54G2333 Cannabis sativa HOM05D001447 ORTHO05D005923 4.3e-13 80.9 321 27.7
LjContig00136g0008106 Lotus japonicus HOM05D001447 ORTHO05D005923 4.3e-13 80.9 321 27.1
Cpa.g.sc84.6 Carica papaya HOM05D001447 ORTHO05D005923 5.6e-13 80.5 324 24.4
Eucgr.J00732 Eucalyptus grandis HOM05D001447 ORTHO05D005923 5.6e-13 80.5 315 27.3
Dinv36208 Davidia involucrata HOM05D001447 ORTHO05D005923 7.3e-13 80.1 317 26.8
MBI13_g04766_MAGBIO Magnolia biondii HOM05D001447 ORTHO05D005923 9.5e-13 79.7 322 25.8
CAN.G625.44 Capsicum annuum HOM05D001447 ORTHO05D005923 1.2e-12 79.3 316 26.6
ATR0681G241 Amborella trichopoda HOM05D001447 ORTHO05D005923 1.6e-12 79.0 336 25.6
Oeu038401.1 Olea europaea HOM05D001447 ORTHO05D005923 2.1e-12 78.6 316 24.1
arahy.Tifrunner.gnm1.ann1.QJKL08 Arachis hypogaea HOM05D001447 ORTHO05D005923 2.8e-12 78.2 331 26.9
MD03G1170100 Malus domestica HOM05D001447 ORTHO05D005923 4.7e-12 77.4 309 24.3
TWI14G1124 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 6.2e-12 77.0 335 24.8
VMungo1383G2912 Vigna mungo HOM05D001447 ORTHO05D005923 6.2e-12 77.0 313 24.0
RcHm_v2.0_Chr5g0051191 Rosa chinensis HOM05D001447 ORTHO05D005923 8.0e-12 76.6 337 24.9
ECA233G1682 Erigeron canadensis HOM05D001447 ORTHO05D005923 1.1e-11 76.3 319 26.3
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 1.1e-11 76.3 334 22.8
Gorai.009G074300 Gossypium raimondii HOM05D001447 ORTHO05D005923 3.1e-11 74.7 310 25.2
Hma1.2p1_1503F.1_g287490 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 3.1e-11 74.7 311 25.4
Rhsim13G0217200 Rhododendron simsii HOM05D001447 ORTHO05D005923 3.1e-11 74.7 342 26.9
Glyma.10G069400 Glycine max HOM05D001447 ORTHO05D005923 4.0e-11 74.3 316 26.9
Glyma.18G222500 Glycine max HOM05D001447 ORTHO05D005923 4.0e-11 74.3 319 27.0
Potri.009G049500 Populus trichocarpa HOM05D001447 ORTHO05D005923 4.0e-11 74.3 323 24.5
Lsat_1_v5_gn_2_28360 Lactuca sativa HOM05D001447 ORTHO05D005923 6.8e-11 73.6 313 24.6
Sopen02g030930 Solanum pennellii HOM05D001447 ORTHO05D005923 6.8e-11 73.6 315 25.7
Gohir.A05G070400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 8.9e-11 73.2 310 24.5
Manes.06G161200 Manihot esculenta HOM05D001447 ORTHO05D005923 8.9e-11 73.2 321 24.6
PSO170G2976 Papaver somniferum HOM05D001447 ORTHO05D005923 8.9e-11 73.2 327 24.5
Phvul.008G074800 Phaseolus vulgaris HOM05D001447 ORTHO05D005923 8.9e-11 73.2 311 26.4
Migut.O00259 Erythranthe guttata HOM05D001447 ORTHO05D005923 1.2e-10 72.8 312 24.7
MELO3C014572.2 Cucumis melo HOM05D001447 ORTHO05D005923 1.5e-10 72.4 317 22.7
Hund21995 Selenicereus undatus HOM05D001447 ORTHO05D005923 2.0e-10 72.0 338 26.9
FAN16G0976 Fragaria x ananassa HOM05D001447 ORTHO05D005923 2.6e-10 71.6 320 25.9
CARHR095600 Cardamine hirsuta HOM05D001447 ORTHO05D005923 3.4e-10 71.2 319 25.4
Solyc02g086250.4 Solanum lycopersicum HOM05D001447 ORTHO05D005923 3.4e-10 71.2 322 24.8
TAR369G0010 Trochodendron aralioides HOM05D001447 ORTHO05D005923 5.8e-10 70.5 318 25.2
THA.LOC104809267 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 9.8e-10 69.7 323 25.7
Nitab4.5_0003652g0030 Nicotiana tabacum HOM05D001447 ORTHO05D005923 1.7e-09 68.9 323 26.3
Sc09g0000900 Simmondsia chinensis HOM05D001447 ORTHO05D005923 1.7e-09 68.9 319 24.5
Actinidia06934 Actinidia chinensis HOM05D001447 ORTHO05D008204 2.2e-09 68.6 328 25.3
CsaV3_6G039120 Cucumis sativus L. HOM05D001447 ORTHO05D008204 2.2e-09 68.6 319 23.8
HanXRQChr14g0441711 Helianthus annuus HOM05D001447 ORTHO05D005923 2.2e-09 68.6 313 24.6
MSTRG.11555 Avicennia marina HOM05D001447 ORTHO05D005923 2.9e-09 68.2 330 27.3
FvH4_3g28310 Fragaria vesca HOM05D001447 ORTHO05D005923 2.9e-09 68.2 321 25.5
FAN11G3154 Fragaria x ananassa HOM05D001447 ORTHO05D005923 2.9e-09 68.2 321 25.5
Aa31LG8G6860 Aethionema arabicum HOM05D001447 ORTHO05D005923 3.7e-09 67.8 310 23.9
Glyma.13G152406 Glycine max HOM05D001447 ORTHO05D005923 3.7e-09 67.8 316 26.3
MD11G1187600 Malus domestica HOM05D001447 ORTHO05D005923 3.7e-09 67.8 309 24.3
Ah.06g193790 Amaranthus hybridus HOM05D001447 ORTHO05D005923 6.4e-09 67.0 312 26.6
ClCG02G023020 Citrullus lanatus HOM05D001447 ORTHO05D008204 1.4e-08 65.9 460 22.6
PSO384G1304 Papaver somniferum HOM05D001447 ORTHO05D005923 1.4e-08 65.9 325 26.8
THA.LOC104811411 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 1.9e-08 65.5 316 26.9
PSO339G5991 Papaver somniferum HOM05D001447 ORTHO05D005923 2.4e-08 65.1 336 25.0
TAR623G1061 Trochodendron aralioides HOM05D001447 ORTHO05D005923 2.4e-08 65.1 332 25.3
Cc01_g06480 Coffea canephora HOM05D001447 ORTHO05D005923 3.2e-08 64.7 332 25.3
ECA234G3051 Erigeron canadensis HOM05D001447 ORTHO05D005923 4.1e-08 64.3 307 27.0
CSS0020855 Camellia sinensis var. sinensis HOM05D001447 ORTHO05D005923 5.4e-08 63.9 418 23.2
Gohir.D05G073400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 7.0e-08 63.5 309 23.6
Sp3g18100 Schrenkiella parvula HOM05D001447 ORTHO05D005923 7.0e-08 63.5 315 24.4
Hma1.2p1_1116F.1_g258880 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 1.6e-07 62.4 300 25.3
Aqoxy2G00276 Aquilegia oxysepala HOM05D001447 ORTHO05D005923 2.0e-07 62.0 332 25.6
FAN21G0933 Fragaria x ananassa HOM05D001447 ORTHO05D005923 2.0e-07 62.0 327 24.8
FAN25G1867 Fragaria x ananassa HOM05D001447 ORTHO05D005923 2.0e-07 62.0 320 24.7
Lalb_Chr17g0336631 Lupinus albus HOM05D001447 ORTHO05D005923 2.0e-07 62.0 329 24.3
Glyma.09G267400 Glycine max HOM05D001447 ORTHO05D005923 4.6e-07 60.8 315 23.2
Duzib168G0657 Durio zibethinus HOM05D001447 ORTHO05D005923 1.0e-06 59.7 287 24.4
Peaxi162Scf00394g00910 Petunia axillaris HOM05D001447 ORTHO05D005923 1.3e-06 59.3 107 34.6
DCAR_002089 Daucus carota HOM05D001447 ORTHO05D005923 2.3e-06 58.5 73 41.1
Carub.0003s1999 Capsella rubella HOM05D001447 ORTHO05D005923 3.9e-06 57.8 317 21.5
Actinidia16355 Actinidia chinensis HOM05D001447 ORTHO05D005923 5.0e-06 57.4 78 39.7
Lalb_Chr20g0108071 Lupinus albus HOM05D001447 ORTHO05D005923 5.0e-06 57.4 334 24.3
AL3G33750 Arabidopsis lyrata HOM05D001447 ORTHO05D005923 6.6e-06 57.0 310 21.9


User provided reference genes

Program Settings