Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0019s0092 Marchantia polymorpha HOM05D006480 ORTHO05D008072 5.8e-68 260.8 131 100.0
Ca_30083_v3 Cicer arietinum L. HOM05D006480 ORTHO05D008072 3.6e-46 188.3 118 76.3
Phvul.009G113300 Phaseolus vulgaris HOM05D006480 ORTHO05D008072 4.7e-46 188.0 124 71.0
Medtr3g110600 Medicago truncatula HOM05D006480 ORTHO05D008072 6.2e-46 187.6 118 74.6
Psat0s2525g0120 Pisum sativum HOM05D006480 ORTHO05D008072 6.2e-46 187.6 118 73.7
Lj1g0003564 Lotus japonicus HOM05D006480 ORTHO05D008072 8.1e-46 187.2 124 71.8
TPR.G12422 Trifolium pratense HOM05D006480 ORTHO05D008072 1.4e-45 186.4 118 74.6
Manes.18G039100 Manihot esculenta HOM05D006480 ORTHO05D008072 1.8e-45 186.0 131 67.9
Psat5g019760 Pisum sativum HOM05D006480 ORTHO05D008072 2.4e-45 185.7 118 72.9
Glyma.04G087700 Glycine max HOM05D006480 ORTHO05D008072 3.1e-45 185.3 118 72.9
AT1G10030 Arabidopsis thaliana HOM05D006480 ORTHO05D008072 5.2e-45 184.5 123 69.1
ECA234G4602 Erigeron canadensis HOM05D006480 ORTHO05D008072 6.8e-45 184.1 118 72.0
Glyma.06G089400 Glycine max HOM05D006480 ORTHO05D008072 6.8e-45 184.1 118 72.9
Lsat_1_v5_gn_5_111841 Lactuca sativa HOM05D006480 ORTHO05D008072 6.8e-45 184.1 118 73.7
AL1G20730 Arabidopsis lyrata HOM05D006480 ORTHO05D008072 1.2e-44 183.3 123 68.3
Carub.0001s0945 Capsella rubella HOM05D006480 ORTHO05D008072 2.0e-44 182.6 123 69.1
CiPaw.15G154000 Carya illinoinensis HOM05D006480 ORTHO05D008072 2.0e-44 182.6 131 66.4
Gohir.A05G213700 Gossypium hirsutum HOM05D006480 ORTHO05D008072 3.4e-44 181.8 129 65.1
BcaC07g38564 Brassica carinata HOM05D006480 ORTHO05D008072 4.4e-44 181.4 123 69.1
CARHR010140 Cardamine hirsuta HOM05D006480 ORTHO05D008072 4.4e-44 181.4 123 66.7
Migut.N02813 Erythranthe guttata HOM05D006480 ORTHO05D008072 4.4e-44 181.4 118 72.0
GSVIVG01009268001 Vitis vinifera HOM05D006480 ORTHO05D008072 4.4e-44 181.4 118 71.2
Lalb_Chr11g0064651 Lupinus albus HOM05D006480 ORTHO05D008072 5.8e-44 181.0 118 72.0
BcaC05g24814 Brassica carinata HOM05D006480 ORTHO05D008072 1.3e-43 179.9 123 67.5
C05p08210 Brassica napus HOM05D006480 ORTHO05D008072 1.3e-43 179.9 123 67.5
Dinv16062 Davidia involucrata HOM05D006480 ORTHO05D008072 1.3e-43 179.9 118 69.5
Thhalv10009099m.g Eutrema salsugineum HOM05D006480 ORTHO05D008072 1.3e-43 179.9 123 68.3
Potri.002G112700 Populus trichocarpa HOM05D006480 ORTHO05D008072 1.3e-43 179.9 118 69.5
SGA_v2.0_scaffold152G36869 Striga asiatica HOM05D006480 ORTHO05D008072 1.3e-43 179.9 118 70.3
THA.LOC104816778 Tarenaya hassleriana HOM05D006480 ORTHO05D008072 1.3e-43 179.9 118 68.6
BcaC05g24816 Brassica carinata HOM05D006480 ORTHO05D008072 1.7e-43 179.5 123 67.5
A06p06730 Brassica napus HOM05D006480 ORTHO05D008072 1.7e-43 179.5 123 67.5
Duzib116G0020 Durio zibethinus HOM05D006480 ORTHO05D008072 1.7e-43 179.5 118 68.6
Duzib116G0295 Durio zibethinus HOM05D006480 ORTHO05D008072 1.7e-43 179.5 118 68.6
Nitab4.5_0001614g0080 Nicotiana tabacum HOM05D006480 ORTHO05D008072 1.7e-43 179.5 124 67.7
Sc15g0005270 Simmondsia chinensis HOM05D006480 ORTHO05D008072 1.7e-43 179.5 118 70.3
Ciclev10002836m.g Citrus clementina HOM05D006480 ORTHO05D008072 2.2e-43 179.1 124 66.1
Duzib093G0124 Durio zibethinus HOM05D006480 ORTHO05D008072 2.2e-43 179.1 118 67.8
Eucgr.F02200 Eucalyptus grandis HOM05D006480 ORTHO05D008072 2.2e-43 179.1 124 66.1
Gohir.D05G217100 Gossypium hirsutum HOM05D006480 ORTHO05D008072 2.2e-43 179.1 118 68.6
MD05G1108500 Malus domestica HOM05D006480 ORTHO05D008072 2.2e-43 179.1 118 71.2
Aqoxy6G01530 Aquilegia oxysepala HOM05D006480 ORTHO05D008072 2.9e-43 178.7 118 67.8
CsaV3_3G048380 Cucumis sativus L. HOM05D006480 ORTHO05D008072 2.9e-43 178.7 124 65.3
Gohir.D06G025000 Gossypium hirsutum HOM05D006480 ORTHO05D008072 2.9e-43 178.7 118 67.8
Peaxi162Scf00628g00517 Petunia axillaris HOM05D006480 ORTHO05D008072 2.9e-43 178.7 124 66.9
Sp1g08680 Schrenkiella parvula HOM05D006480 ORTHO05D008072 2.9e-43 178.7 123 67.5
arahy.Tifrunner.gnm1.ann1.2A26X2 Arachis hypogaea HOM05D006480 ORTHO05D008072 3.8e-43 178.3 118 67.8
A08p34230 Brassica napus HOM05D006480 ORTHO05D008072 3.8e-43 178.3 123 67.5
BraA08t35335Z Brassica rapa HOM05D006480 ORTHO05D008072 3.8e-43 178.3 123 67.5
PSO675G8575 Papaver somniferum HOM05D006480 ORTHO05D008072 3.8e-43 178.3 125 67.2
PGSC0003DMG400004956 Solanum tuberosum HOM05D006480 ORTHO05D008072 4.9e-43 177.9 124 66.9
Zm00001eb032930 Zea mays HOM05D006480 ORTHO05D008072 4.9e-43 177.9 116 69.8
Hma1.2p1_1068F.1_g253990 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 6.4e-43 177.6 118 67.8
PSO541G2150 Papaver somniferum HOM05D006480 ORTHO05D008072 6.4e-43 177.6 125 67.2
Sed0011969 Sechium edule HOM05D006480 ORTHO05D008072 6.4e-43 177.6 118 66.9
HPP92_019513 Vanilla planifolia HOM05D006480 ORTHO05D008072 6.4e-43 177.6 129 62.8
Actinidia10245 Actinidia chinensis HOM05D006480 ORTHO05D008072 8.4e-43 177.2 118 66.9
Zm00001eb282130 Zea mays HOM05D006480 ORTHO05D008072 8.4e-43 177.2 116 69.8
Ah.05g166870 Amaranthus hybridus HOM05D006480 ORTHO05D008072 1.1e-42 176.8 118 67.8
Hma1.2p1_2654F.1_g326220 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 1.1e-42 176.8 118 69.5
FvH4_2g03000 Fragaria vesca HOM05D006480 ORTHO05D008072 1.4e-42 176.4 118 68.6
FAN15G0464 Fragaria x ananassa HOM05D006480 ORTHO05D008072 1.4e-42 176.4 118 68.6
Prupe.8G152200 Prunus persica HOM05D006480 ORTHO05D008072 1.4e-42 176.4 118 69.5
Solyc04g077150.3 Solanum lycopersicum HOM05D006480 ORTHO05D008072 1.4e-42 176.4 124 66.1
Sopen04g030760 Solanum pennellii HOM05D006480 ORTHO05D008072 1.4e-42 176.4 124 66.1
Manes.05G185600 Manihot esculenta HOM05D006480 ORTHO05D008072 1.9e-42 176.0 118 66.1
Os12g0633200 Oryza sativa ssp. japonica HOM05D006480 ORTHO05D008072 1.9e-42 176.0 118 68.6
Thecc.08G081100 Theobroma cacao HOM05D006480 ORTHO05D008072 1.9e-42 176.0 118 67.8
CANSAT25G0792 Cannabis sativa HOM05D006480 ORTHO05D008072 2.4e-42 175.6 118 68.6
CAN.G416.48 Capsicum annuum HOM05D006480 ORTHO05D008072 2.4e-42 175.6 124 66.1
Cpa.g.sc160.14 Carica papaya HOM05D006480 ORTHO05D008072 2.4e-42 175.6 118 68.6
HanXRQChr10g0293651 Helianthus annuus HOM05D006480 ORTHO05D008072 2.4e-42 175.6 118 70.3
PGR031G1285 Punica granatum HOM05D006480 ORTHO05D008072 2.4e-42 175.6 118 66.9
TWI56G0589 Tripterygium wilfordii HOM05D006480 ORTHO05D008072 2.4e-42 175.6 131 61.8
BolC5t29573H Brassica oleracea HOM05D006480 ORTHO05D008072 3.2e-42 175.3 126 65.9
Cc10_g07920 Coffea canephora HOM05D006480 ORTHO05D008072 3.2e-42 175.3 118 67.8
BolC8t48966H Brassica oleracea HOM05D006480 ORTHO05D008072 4.2e-42 174.9 125 67.2
Dinv01222 Davidia involucrata HOM05D006480 ORTHO05D008072 4.2e-42 174.9 118 65.3
VMungo1309G2678 Vigna mungo HOM05D006480 ORTHO05D008072 4.2e-42 174.9 107 77.6
RcHm_v2.0_Chr6g0247791 Rosa chinensis HOM05D006480 ORTHO05D008072 5.4e-42 174.5 118 67.8
MSTRG.25010 Avicennia marina HOM05D006480 ORTHO05D008072 7.1e-42 174.1 118 65.3
EL10Ac1g02330 Beta vulgaris HOM05D006480 ORTHO05D008072 9.3e-42 173.7 129 64.3
Nn5g30706 Nelumbo nucifera HOM05D006480 ORTHO05D008072 2.1e-41 172.6 118 65.3
FAN20G1015 Fragaria x ananassa HOM05D006480 ORTHO05D008072 3.5e-41 171.8 118 66.9
MBI16_g24165_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 3.5e-41 171.8 118 63.6
MELO3C003481.2 Cucumis melo HOM05D006480 ORTHO05D008072 4.6e-41 171.4 126 64.3
arahy.Tifrunner.gnm1.ann1.27XHB7 Arachis hypogaea HOM05D006480 ORTHO05D008072 7.8e-41 170.6 115 70.4
Gohir.A06G027600 Gossypium hirsutum HOM05D006480 ORTHO05D008072 1.3e-40 169.9 108 72.2
C08p13360 Brassica napus HOM05D006480 ORTHO05D008072 2.3e-40 169.1 124 66.1
FAN24G1468 Fragaria x ananassa HOM05D006480 ORTHO05D008072 3.0e-40 168.7 118 68.6
Sabra02G0089000 Salix brachista HOM05D006480 ORTHO05D008072 3.0e-40 168.7 112 68.8
Hund05252 Selenicereus undatus HOM05D006480 ORTHO05D008072 3.0e-40 168.7 107 72.0
Gorai.010G029400 Gossypium raimondii HOM05D006480 ORTHO05D008072 3.9e-40 168.3 107 72.0
MBI16_g31814_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 3.9e-40 168.3 118 62.7
Gorai.009G223900 Gossypium raimondii HOM05D006480 ORTHO05D008072 5.1e-40 167.9 121 63.6
ClCG11G014970 Citrullus lanatus HOM05D006480 ORTHO05D008072 6.6e-40 167.5 107 72.0
SalBow7G2271 Salvia bowleyana HOM05D006480 ORTHO05D008072 8.7e-40 167.2 118 64.4
SMO112G0018 Selaginella moellendorffii HOM05D006480 ORTHO05D008072 1.1e-39 166.8 107 74.8
Oeu000749.3 Olea europaea HOM05D006480 ORTHO05D008072 1.5e-39 166.4 107 72.0
vmacro21395 Vaccinium macrocarpon HOM05D006480 ORTHO05D008072 1.5e-39 166.4 107 71.0
Aa31LG1G4870 Aethionema arabicum HOM05D006480 ORTHO05D008072 2.5e-39 165.6 109 71.6
Rhsim07G0215700 Rhododendron simsii HOM05D006480 ORTHO05D008072 2.5e-39 165.6 128 60.2
FAN27G3220 Fragaria x ananassa HOM05D006480 ORTHO05D008072 4.3e-39 164.9 107 72.0
Lj5A222T80 Lonicera japonica HOM05D006480 ORTHO05D008072 5.6e-39 164.5 109 71.6
Atru.chr13.908 Acer truncatum HOM05D006480 ORTHO05D008072 7.3e-39 164.1 124 63.7
QL12p040680 Quercus lobata HOM05D006480 ORTHO05D008072 9.6e-39 163.7 107 71.0
MD10G1112500 Malus domestica HOM05D006480 ORTHO05D008072 4.8e-38 161.4 121 63.6
BraA06t23887Z Brassica rapa HOM05D006480 ORTHO05D008072 1.1e-37 160.2 158 51.9
Dinv09524 Davidia involucrata HOM05D006480 ORTHO05D008072 1.7e-35 152.9 99 71.7
Nitab4.5_0002415g0030 Nicotiana tabacum HOM05D006480 ORTHO05D008072 3.8e-35 151.8 92 76.1
Thecc.02G032200 Theobroma cacao HOM05D006480 ORTHO05D008072 3.5e-33 145.2 116 58.6
AagrBONN_evm.TU.Sc2ySwM_228.4946 Anthoceros agrestis HOM05D006480 ORTHO05D008072 1.5e-28 129.8 116 52.6
CARHR010030 Cardamine hirsuta HOM05D006480 ORTHO05D008072 2.2e-27 125.9 85 64.7
Zm00001eb116080 Zea mays HOM05D006480 ORTHO05D008072 1.3e-24 116.7 118 47.5
Zm00001eb116100 Zea mays HOM05D006480 ORTHO05D008072 1.3e-24 116.7 118 47.5
CBR_g29820 Chara braunii HOM05D006480 ORTHO05D008072 1.5e-23 113.2 118 41.5
Zm00001eb129140 Zea mays HOM05D006480 ORTHO05D008072 4.3e-23 111.7 118 44.9
Zm00001eb129300 Zea mays HOM05D006480 ORTHO05D008072 1.3e-22 110.2 118 44.1
CBR_g8921 Chara braunii HOM05D001598 ORTHO05D002757 2.1e-22 109.4 118 41.5
Pp3c19_15780 Physcomitrium patens HOM05D006480 ORTHO05D008072 6.2e-22 107.8 86 55.8
Duzib041G0452 Durio zibethinus HOM05D006480 ORTHO05D008072 2.2e-19 99.4 75 58.7
Zm00001eb129210 Zea mays HOM05D006480 ORTHO05D008072 2.9e-19 99.0 101 47.5
Zm00001eb409710 Zea mays HOM05D006480 ORTHO05D008072 1.9e-18 96.3 116 40.5


User provided reference genes

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