Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 3.8e-48 194.5 97 100.0
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 4.9e-32 141.0 88 77.3
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 5.1e-29 131.0 89 67.4
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 6.7e-29 130.6 89 66.3
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 1.9e-28 129.0 89 65.2
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 1.9e-28 129.0 88 68.2
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 1.9e-28 129.0 88 68.2
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 1.9e-28 129.0 89 65.2
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 5.6e-28 127.5 88 67.0
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 7.4e-28 127.1 89 65.2
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 9.6e-28 126.7 89 64.0
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 9.6e-28 126.7 88 67.0
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 9.6e-28 126.7 88 67.0
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 9.6e-28 126.7 88 68.2
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 1.3e-27 126.3 89 65.2
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 1.3e-27 126.3 90 64.4
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.3e-27 126.3 89 66.3
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.3e-27 126.3 89 66.3
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 1.3e-27 126.3 89 66.3
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 1.3e-27 126.3 87 66.7
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 2.1e-27 125.6 89 67.4
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 2.1e-27 125.6 89 68.5
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 2.8e-27 125.2 89 65.2
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 6.2e-27 124.0 88 64.8
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 8.1e-27 123.6 89 64.0
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 8.1e-27 123.6 92 60.9
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 1.1e-26 123.2 88 63.6
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 1.1e-26 123.2 89 65.2
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 1.1e-26 123.2 92 63.0
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 1.1e-26 123.2 89 64.0
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.4e-26 122.9 89 66.3
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 1.4e-26 122.9 89 66.3
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 1.8e-26 122.5 89 64.0
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 2.4e-26 122.1 89 64.0
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 2.4e-26 122.1 89 64.0
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 2.4e-26 122.1 89 65.2
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 3.1e-26 121.7 89 65.2
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 3.1e-26 121.7 89 64.0
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 3.1e-26 121.7 89 65.2
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 3.1e-26 121.7 88 64.8
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 3.1e-26 121.7 88 62.5
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 3.1e-26 121.7 88 63.6
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 4.0e-26 121.3 89 61.8
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 4.0e-26 121.3 92 63.0
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 5.3e-26 120.9 88 65.9
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 5.3e-26 120.9 92 59.8
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 6.9e-26 120.6 89 65.2
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 9.0e-26 120.2 87 60.9
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 9.0e-26 120.2 90 62.2
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 1.2e-25 119.8 88 65.9
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 1.2e-25 119.8 88 65.9
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 1.2e-25 119.8 88 65.9
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 1.2e-25 119.8 88 65.9
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 1.2e-25 119.8 92 63.0
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 1.5e-25 119.4 89 62.9
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 2.0e-25 119.0 92 59.8
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 2.6e-25 118.6 88 64.8
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 3.4e-25 118.2 88 63.6
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 3.4e-25 118.2 88 60.2
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 4.5e-25 117.9 92 60.9
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 5.8e-25 117.5 88 63.6
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 5.8e-25 117.5 89 59.6
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 9.9e-25 116.7 88 64.8
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 9.9e-25 116.7 88 64.8
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 9.9e-25 116.7 88 64.8
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 9.9e-25 116.7 92 59.8
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 1.3e-24 116.3 88 63.6
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 1.3e-24 116.3 92 60.9
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 1.3e-24 116.3 92 59.8
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 1.3e-24 116.3 88 63.6
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 1.7e-24 115.9 87 60.9
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 2.9e-24 115.2 89 58.4
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 3.8e-24 114.8 89 60.7
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 3.8e-24 114.8 89 60.7
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 3.8e-24 114.8 85 65.9
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 4.9e-24 114.4 88 62.5
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 4.9e-24 114.4 88 59.1
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 1.1e-23 113.2 89 61.8
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 1.9e-23 112.5 88 63.6
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 1.9e-23 112.5 94 57.4
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 1.9e-23 112.5 87 60.9
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 2.4e-23 112.1 87 62.1
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 5.5e-23 110.9 85 61.2
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 7.1e-23 110.5 121 47.9
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 2.1e-22 109.0 92 56.5
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 2.1e-22 109.0 87 59.8
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 2.1e-22 109.0 87 59.8
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 2.7e-22 108.6 88 60.2
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 3.5e-22 108.2 87 58.6
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 8.7e-21 103.6 87 57.5
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 8.7e-21 103.6 87 57.5
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 1.1e-20 103.2 73 65.8
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 1.5e-20 102.8 74 66.2
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 3.3e-20 101.7 87 56.3
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 5.6e-20 100.9 74 66.2
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 7.4e-20 100.5 74 63.5
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 1.3e-19 99.8 132 41.7
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 1.3e-19 99.8 74 60.8
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 2.1e-19 99.0 74 62.2
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 1.1e-18 96.7 88 54.5
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 1.1e-18 96.7 76 60.5
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 1.8e-18 95.9 85 54.1
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 4.0e-18 94.7 75 60.0
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 1.3e-16 89.7 70 61.4
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 1.7e-16 89.4 78 56.4
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 4.9e-16 87.8 75 60.0
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 6.5e-16 87.4 75 58.7
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 1.3e-13 79.7 76 55.3
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 4.3e-12 74.7 50 68.0
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 5.7e-12 74.3 64 56.2
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 1.6e-11 72.8 47 68.1
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 2.2e-11 72.4 54 66.7
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 6.3e-11 70.9 81 49.4
MCO16G157 Micromonas commoda HOM05D006748 ORTHO05D008553 5.0e-08 61.2 86 30.2
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 6.5e-08 60.8 41 70.7
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 4.6e-06 54.7 43 60.5
PRCOL_00004170 Prasinoderma coloniale HOM05D006748 ORTHO05D008553 7.9e-06 53.9 92 31.5


User provided reference genes

Program Settings