Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 1.6e-121 439.5 230 100.0
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 1.3e-78 297.0 208 70.2
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 1.7e-78 296.6 207 70.5
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 1.2e-76 290.4 207 71.5
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 9.4e-74 280.8 207 69.1
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 1.2e-73 280.4 208 70.7
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 2.7e-73 279.3 207 68.1
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 3.6e-73 278.9 223 64.6
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 4.7e-73 278.5 207 69.1
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 8.0e-73 277.7 207 69.1
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 8.0e-73 277.7 207 68.1
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 1.8e-72 276.6 206 68.4
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 3.0e-72 275.8 206 68.9
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 3.0e-72 275.8 206 68.9
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 5.2e-72 275.0 207 68.1
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 6.8e-72 274.6 207 68.1
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 6.8e-72 274.6 207 67.6
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 8.8e-72 274.2 209 66.5
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 8.8e-72 274.2 209 66.5
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 1.5e-71 273.5 207 66.7
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 1.5e-71 273.5 207 66.2
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.5e-71 273.5 207 68.1
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.5e-71 273.5 207 68.1
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 2.0e-71 273.1 207 66.2
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.6e-71 272.7 207 68.1
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 3.4e-71 272.3 207 67.1
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 4.4e-71 271.9 207 66.2
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 4.4e-71 271.9 207 67.1
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 4.4e-71 271.9 207 66.7
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 5.7e-71 271.6 207 66.2
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 5.7e-71 271.6 207 65.7
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 5.7e-71 271.6 207 67.1
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 5.7e-71 271.6 207 65.2
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 5.7e-71 271.6 207 67.1
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 5.7e-71 271.6 207 67.6
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 7.5e-71 271.2 207 67.1
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 7.5e-71 271.2 207 66.2
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 7.5e-71 271.2 207 67.1
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 9.8e-71 270.8 206 66.5
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 9.8e-71 270.8 207 64.7
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 9.8e-71 270.8 207 67.1
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 1.3e-70 270.4 207 65.2
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 1.3e-70 270.4 207 67.1
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 1.3e-70 270.4 206 67.0
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 1.3e-70 270.4 207 67.1
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 1.3e-70 270.4 209 66.5
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 1.7e-70 270.0 217 64.5
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 1.7e-70 270.0 207 65.7
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 1.7e-70 270.0 207 65.7
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.2e-70 269.6 207 66.2
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 2.8e-70 269.2 208 65.9
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 2.8e-70 269.2 207 66.7
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 3.7e-70 268.9 206 65.5
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 3.7e-70 268.9 231 61.0
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 3.7e-70 268.9 207 66.7
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 4.8e-70 268.5 207 65.7
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 6.3e-70 268.1 206 67.5
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 8.3e-70 267.7 207 65.2
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 8.3e-70 267.7 207 64.3
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 8.3e-70 267.7 207 64.3
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 1.4e-69 266.9 207 65.7
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 1.8e-69 266.5 207 63.8
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 1.8e-69 266.5 207 64.3
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 2.4e-69 266.2 207 65.2
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 3.1e-69 265.8 207 64.7
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 4.1e-69 265.4 208 64.9
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 5.4e-69 265.0 233 61.4
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 9.1e-69 264.2 217 63.1
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 1.2e-68 263.8 207 64.3
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 1.2e-68 263.8 207 66.2
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 2.7e-68 262.7 199 66.3
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 4.5e-68 261.9 207 62.3
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 7.7e-68 261.2 207 63.3
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 1.0e-67 260.8 207 63.8
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 1.7e-67 260.0 235 59.1
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 5.0e-67 258.5 208 64.4
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 8.6e-67 257.7 235 59.1
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 8.6e-67 257.7 235 59.1
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 1.5e-66 256.9 192 67.2
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 2.5e-66 256.1 207 63.3
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 1.0e-64 250.8 196 66.3
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 1.0e-64 250.8 215 64.2
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 1.4e-64 250.4 192 64.6
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 1.8e-64 250.0 192 65.1
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 5.2e-64 248.4 192 64.1
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 8.9e-64 247.7 200 65.0
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 2.0e-63 246.5 192 65.1
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 3.4e-63 245.7 217 61.3
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 7.5e-63 244.6 197 64.5
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 4.9e-62 241.9 207 62.3
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 8.3e-62 241.1 207 62.8
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.8e-61 240.0 207 61.8
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 7.0e-61 238.0 192 63.5
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.0e-59 234.2 183 63.9
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 1.4e-56 223.8 143 86.0
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 3.1e-56 222.6 173 68.8
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 8.9e-56 221.1 190 62.6
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 4.9e-54 215.3 207 58.5
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 1.9e-53 213.4 170 67.6
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 2.7e-52 209.5 198 59.1
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 2.8e-49 199.5 205 55.1
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.5e-47 193.7 157 68.8
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 1.2e-44 184.1 222 47.7
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 7.8e-44 181.4 138 71.7
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 3.9e-43 179.1 139 70.5
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 5.8e-39 165.2 140 57.1
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.2e-36 157.5 113 72.6
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 2.3e-35 153.3 182 50.5
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 1.1e-34 151.0 133 61.7
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 8.1e-33 144.8 119 65.5
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 2.4e-29 133.3 102 71.6
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 3.5e-28 129.4 211 38.9
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 6.0e-28 128.6 205 38.0
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 1.0e-27 127.9 197 38.6
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.5e-26 124.0 106 64.2
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 6.4e-22 108.6 82 56.1
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 3.0e-19 99.8 66 78.8
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 1.3e-17 94.4 79 53.2
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 4.0e-16 89.4 80 61.2
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 5.3e-16 89.0 101 54.5
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 2.9e-14 83.2 101 51.5
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 3.1e-08 63.2 43 58.1


User provided reference genes

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