Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 1.2e-88 329.7 162 100.0
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 3.6e-27 125.6 118 55.9
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 6.8e-18 94.7 104 46.2
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 2.6e-17 92.8 78 53.8
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 1.2e-14 84.0 116 44.8
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 2.0e-14 83.2 107 43.0
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 2.7e-14 82.8 98 43.9
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 2.7e-14 82.8 98 44.9
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 3.5e-14 82.4 118 39.8
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 3.5e-14 82.4 91 48.4
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 3.5e-14 82.4 89 44.9
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 4.5e-14 82.0 121 42.1
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 1.3e-13 80.5 96 45.8
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 1.3e-13 80.5 115 41.7
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 2.9e-13 79.3 82 50.0
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 2.9e-13 79.3 114 42.1
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 2.9e-13 79.3 115 41.7
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 5.0e-13 78.6 94 43.6
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 5.0e-13 78.6 125 40.0
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 6.5e-13 78.2 79 46.8
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 6.5e-13 78.2 82 46.3
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 6.5e-13 78.2 120 38.3
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 8.5e-13 77.8 118 39.8
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 8.5e-13 77.8 79 50.6
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 8.5e-13 77.8 126 40.5
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 8.5e-13 77.8 82 46.3
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 8.5e-13 77.8 101 45.5
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 1.1e-12 77.4 102 42.2
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 1.1e-12 77.4 119 38.7
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 1.1e-12 77.4 99 41.4
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 1.1e-12 77.4 87 47.1
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 1.5e-12 77.0 110 39.1
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 1.5e-12 77.0 100 39.0
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 1.5e-12 77.0 82 45.1
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 1.5e-12 77.0 95 41.1
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 1.9e-12 76.6 110 38.2
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 1.9e-12 76.6 111 39.6
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 1.9e-12 76.6 111 39.6
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 1.9e-12 76.6 79 48.1
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 1.9e-12 76.6 121 40.5
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 1.9e-12 76.6 100 41.0
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 1.9e-12 76.6 83 43.4
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 1.9e-12 76.6 80 46.2
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 2.5e-12 76.3 135 37.8
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 2.5e-12 76.3 103 41.7
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 2.5e-12 76.3 118 37.3
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 2.5e-12 76.3 96 43.8
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 2.5e-12 76.3 105 40.0
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 3.2e-12 75.9 111 39.6
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 3.2e-12 75.9 108 38.9
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 3.2e-12 75.9 120 40.0
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 4.2e-12 75.5 126 36.5
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 4.2e-12 75.5 83 45.8
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 5.5e-12 75.1 121 40.5
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 5.5e-12 75.1 99 41.4
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 5.5e-12 75.1 101 44.6
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 7.2e-12 74.7 70 50.0
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 7.2e-12 74.7 151 35.1
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 7.2e-12 74.7 82 45.1
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 9.5e-12 74.3 114 39.5
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 9.5e-12 74.3 114 37.7
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 9.5e-12 74.3 117 37.6
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 9.5e-12 74.3 114 37.7
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 9.5e-12 74.3 101 42.6
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 9.5e-12 74.3 88 43.2
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 9.5e-12 74.3 118 38.1
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.2e-11 73.9 82 42.7
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 1.6e-11 73.6 82 50.0
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 1.6e-11 73.6 110 38.2
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 1.6e-11 73.6 120 35.0
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 2.1e-11 73.2 79 46.8
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 2.7e-11 72.8 105 41.0
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 2.7e-11 72.8 82 43.9
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 4.7e-11 72.0 70 47.1
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 6.1e-11 71.6 104 37.5
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 6.1e-11 71.6 140 34.3
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 6.1e-11 71.6 82 41.5
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 8.0e-11 71.2 62 48.4
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 1.0e-10 70.9 60 51.7
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 1.4e-10 70.5 140 34.3
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 1.4e-10 70.5 82 46.3
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 1.8e-10 70.1 105 40.0
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 1.8e-10 70.1 105 37.1
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 2.3e-10 69.7 102 42.2
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.0e-10 69.3 82 45.1
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 3.0e-10 69.3 88 44.3
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 5.2e-10 68.6 86 44.2
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 8.8e-10 67.8 120 38.3
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 1.2e-09 67.4 102 39.2
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.2e-09 67.4 126 34.9
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 1.2e-09 67.4 105 40.0
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 1.2e-09 67.4 108 40.7
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 2.0e-09 66.6 60 48.3
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 2.6e-09 66.2 81 45.7
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 4.4e-09 65.5 102 43.1
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 9.8e-09 64.3 80 45.0
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 8.3e-08 61.2 57 49.1
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 4.5e-06 55.5 84 40.5


User provided reference genes

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