Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 1.5e-192 676.0 331 100.0
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 6.2e-34 149.1 124 58.1
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 1.1e-33 148.3 106 62.3
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 4.0e-33 146.4 102 64.7
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.2e-32 144.8 86 70.9
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.2e-32 144.8 86 70.9
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 2.0e-32 144.1 101 62.4
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 2.6e-32 143.7 111 60.4
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 3.4e-32 143.3 90 67.8
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 3.4e-32 143.3 124 57.3
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 3.4e-32 143.3 86 69.8
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 4.4e-32 142.9 95 63.2
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 4.4e-32 142.9 86 70.9
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 5.8e-32 142.5 86 69.8
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 7.5e-32 142.1 117 58.1
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 9.8e-32 141.7 114 55.3
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 9.8e-32 141.7 112 58.0
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 9.8e-32 141.7 86 69.8
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 1.3e-31 141.4 174 46.0
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 1.3e-31 141.4 86 67.4
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 1.7e-31 141.0 86 69.8
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 1.7e-31 141.0 85 69.4
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.7e-31 141.0 105 59.0
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 1.7e-31 141.0 86 67.4
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 2.2e-31 140.6 86 70.9
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 2.2e-31 140.6 86 68.6
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 2.2e-31 140.6 105 59.0
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 2.2e-31 140.6 85 68.2
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 2.2e-31 140.6 104 62.5
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 2.2e-31 140.6 103 60.2
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 2.9e-31 140.2 112 55.4
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 2.9e-31 140.2 117 57.3
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 2.9e-31 140.2 117 57.3
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 2.9e-31 140.2 86 67.4
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 2.9e-31 140.2 86 69.8
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 3.7e-31 139.8 105 59.0
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 3.7e-31 139.8 105 58.1
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 4.9e-31 139.4 84 70.2
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 4.9e-31 139.4 102 60.8
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 6.4e-31 139.0 100 62.0
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 6.4e-31 139.0 119 55.5
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 6.4e-31 139.0 114 57.0
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 6.4e-31 139.0 114 57.0
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 6.4e-31 139.0 86 67.4
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 8.3e-31 138.7 102 60.8
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 8.3e-31 138.7 86 67.4
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 8.3e-31 138.7 87 67.8
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 8.3e-31 138.7 140 50.0
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 1.4e-30 137.9 110 58.2
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 1.9e-30 137.5 121 53.7
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 1.9e-30 137.5 87 64.4
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 1.9e-30 137.5 104 61.5
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 2.4e-30 137.1 105 57.1
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 3.2e-30 136.7 83 67.5
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 3.2e-30 136.7 99 60.6
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 3.2e-30 136.7 116 53.4
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 3.2e-30 136.7 88 64.8
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 4.1e-30 136.3 96 59.4
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 4.1e-30 136.3 90 67.8
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 4.1e-30 136.3 124 52.4
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 5.4e-30 136.0 81 71.6
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 5.4e-30 136.0 128 50.8
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 7.1e-30 135.6 85 68.2
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 7.1e-30 135.6 106 62.3
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 9.2e-30 135.2 82 70.7
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 9.2e-30 135.2 83 69.9
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 9.2e-30 135.2 81 69.1
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 9.2e-30 135.2 113 53.1
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 9.2e-30 135.2 90 66.7
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 1.2e-29 134.8 85 67.1
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 1.2e-29 134.8 142 49.3
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 1.6e-29 134.4 145 49.7
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 7.8e-29 132.1 93 63.4
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 1.7e-28 131.0 95 56.8
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 2.3e-28 130.6 116 54.3
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 8.6e-28 128.6 71 74.6
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 1.5e-27 127.9 71 73.2
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 1.5e-27 127.9 129 47.3
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 4.3e-27 126.3 128 50.0
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 2.1e-26 124.0 71 70.4
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 1.3e-23 114.8 70 68.6
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 1.7e-23 114.4 64 71.9
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 2.2e-23 114.0 108 52.8
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 4.9e-23 112.8 110 50.9
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 1.9e-22 110.9 64 70.3
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 4.1e-22 109.8 70 68.6
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 4.1e-22 109.8 69 66.7
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 4.1e-22 109.8 73 68.5
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 4.1e-22 109.8 98 51.0
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 5.4e-22 109.4 70 65.7
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 1.6e-21 107.8 73 64.4
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 2.1e-21 107.5 73 63.0
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 4.6e-21 106.3 73 65.8
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 3.0e-20 103.6 77 61.0
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 6.6e-20 102.4 66 66.7
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 1.5e-19 101.3 76 52.6
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 4.0e-17 93.2 99 46.5
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 4.0e-17 93.2 64 57.8
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 1.3e-15 88.2 72 56.9
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 3.0e-12 77.0 49 63.3
CBR_g19673 Chara braunii HOM05D007483 ORTHO05D009133 4.9e-07 59.7 37 64.9


User provided reference genes

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