Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0017s0010 Marchantia polymorpha HOM05D003430 ORTHO05D004809 5.8e-39 163.7 79 100.0
Pp3c4_28970 Physcomitrium patens HOM05D003430 ORTHO05D004809 9.3e-21 103.2 58 81.0
Pp3c4_28972 Physcomitrium patens HOM05D003430 ORTHO05D004809 9.3e-21 103.2 58 81.0
MBI05_g40995_MAGBIO Magnolia biondii HOM05D003430 ORTHO05D004809 7.1e-13 77.0 60 70.0
Aqoxy23s002 Aquilegia oxysepala HOM05D003430 ORTHO05D004809 6.0e-12 73.9 60 68.3
ATR0559G258 Amborella trichopoda HOM05D003430 ORTHO05D004809 7.9e-12 73.6 59 66.1
SGA_v2.0_scaffold245G44667 Striga asiatica HOM05D003430 ORTHO05D004809 1.8e-11 72.4 59 67.8
Ah.10g028080 Amaranthus hybridus HOM05D003430 ORTHO05D004809 2.3e-11 72.0 59 64.4
Gohir.D01G116901 Gossypium hirsutum HOM05D003430 ORTHO05D004809 3.0e-11 71.6 58 65.5
SHI29635 Sapria himalayana HOM05D003430 ORTHO05D004809 3.9e-11 71.2 60 65.0
Solyc00g052430.2 Solanum lycopersicum HOM05D003430 ORTHO05D004809 6.7e-11 70.5 59 66.1
Solyc00g500224.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 6.7e-11 70.5 59 66.1
Solyc00g500241.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 6.7e-11 70.5 59 66.1
unitig_87.g27923 Utricularia gibba HOM05D003430 ORTHO05D004809 6.7e-11 70.5 59 66.1
Peaxi162Scf00456g00036 Petunia axillaris HOM05D003430 ORTHO05D004809 1.1e-10 69.7 59 64.4
Peaxi162Scf00456g00037 Petunia axillaris HOM05D003430 ORTHO05D004809 1.1e-10 69.7 59 64.4
RcHm_v2.0_MTg0498431 Rosa chinensis HOM05D003430 ORTHO05D004809 1.5e-10 69.3 59 64.4
SabraMtG0000300 Salix brachista HOM05D003430 ORTHO05D004809 1.5e-10 69.3 59 64.4
Zm00001eb435490 Zea mays HOM05D003430 ORTHO05D004809 1.9e-10 68.9 59 61.0
Zm00001eb436080 Zea mays HOM05D003430 ORTHO05D004809 1.9e-10 68.9 59 61.0
Aa31csc1081G20 Aethionema arabicum HOM05D003430 ORTHO05D004809 4.3e-10 67.8 59 62.7
ATMG00180 Arabidopsis thaliana HOM05D003430 ORTHO05D004809 4.3e-10 67.8 59 62.7
A04p09460 Brassica napus HOM05D003430 ORTHO05D004809 4.3e-10 67.8 59 62.7
BolSC28t60376H Brassica oleracea HOM05D003430 ORTHO05D004809 4.3e-10 67.8 59 62.7
BraSC177t45748Z Brassica rapa HOM05D003430 ORTHO05D004809 4.3e-10 67.8 59 62.7
BraSC48t46245Z Brassica rapa HOM05D003430 ORTHO05D004809 4.3e-10 67.8 59 62.7
BraSC54t46373Z Brassica rapa HOM05D003430 ORTHO05D004809 4.3e-10 67.8 59 62.7
CARHR282710 Cardamine hirsuta HOM05D003430 ORTHO05D004809 4.3e-10 67.8 59 62.7
CARHR288640 Cardamine hirsuta HOM05D003430 ORTHO05D004809 4.3e-10 67.8 59 62.7
CANSAT16G0003 Cannabis sativa HOM05D003430 ORTHO05D004809 9.6e-10 66.6 59 62.7
Cfa023013 Carpinus fangiana HOM05D003430 ORTHO05D004809 9.6e-10 66.6 59 62.7
Sc11g0004440 Simmondsia chinensis HOM05D003430 ORTHO05D004809 9.6e-10 66.6 59 62.7
DCAR_032431 Daucus carota HOM05D003430 ORTHO05D004809 1.6e-09 65.9 59 62.7
BraSC77t46628Z Brassica rapa HOM05D003430 ORTHO05D004809 2.1e-09 65.5 54 64.8
arahy.Tifrunner.gnm1.ann1.13LUN9 Arachis hypogaea HOM05D003430 ORTHO05D004809 2.8e-09 65.1 59 62.7
arahy.Tifrunner.gnm1.ann1.2J3QCS Arachis hypogaea HOM05D003430 ORTHO05D004809 2.8e-09 65.1 59 62.7
arahy.Tifrunner.gnm1.ann1.4C4WEU Arachis hypogaea HOM05D003430 ORTHO05D004809 2.8e-09 65.1 59 62.7
Thhalv10002931m.g Eutrema salsugineum HOM05D003430 ORTHO05D004809 2.8e-09 65.1 51 64.7
Lalb_Chr00c21g0406111 Lupinus albus HOM05D003430 ORTHO05D004809 2.8e-09 65.1 59 61.0
Lalb_Chr00c39g0409061 Lupinus albus HOM05D003430 ORTHO05D004809 2.8e-09 65.1 59 61.0
Lalb_Chr00c39g0409241 Lupinus albus HOM05D003430 ORTHO05D004809 2.8e-09 65.1 59 61.0
Lalb_Chr00c51g0413151 Lupinus albus HOM05D003430 ORTHO05D004809 2.8e-09 65.1 59 61.0
LjContig00439g0009782 Lotus japonicus HOM05D003430 ORTHO05D004809 4.8e-09 64.3 59 61.0
Medtr0082s0260 Medicago truncatula HOM05D003430 ORTHO05D004809 4.8e-09 64.3 59 61.0
Lj2C1222T70 Lonicera japonica HOM05D003430 ORTHO05D004809 1.1e-08 63.2 54 63.0
HanXRQChr00c0055g0571401 Helianthus annuus HOM05D003430 ORTHO05D004809 1.4e-08 62.8 59 59.3
HanXRQMTg0579531 Helianthus annuus HOM05D003430 ORTHO05D004809 1.4e-08 62.8 59 59.3
Nitab4.5_0003945g0010 Nicotiana tabacum HOM05D003430 ORTHO05D004809 2.4e-08 62.0 58 58.6
Nitab4.5_0001127g0210 Nicotiana tabacum HOM05D003430 ORTHO05D004809 1.2e-07 59.7 59 57.6
Gorai.002G142200 Gossypium raimondii HOM05D003430 ORTHO05D004809 1.5e-07 59.3 46 63.0
Nitab4.5_0000684g0110 Nicotiana tabacum HOM05D003430 ORTHO05D015169 2.0e-07 58.9 44 68.2
HanXRQChr11g0335431 Helianthus annuus HOM05D003430 ORTHO05D004809 4.5e-07 57.8 51 58.8
Medtr0024s0150 Medicago truncatula HOM05D003430 ORTHO05D004809 4.5e-07 57.8 59 55.9
Gorai.001G162300 Gossypium raimondii HOM05D003430 ORTHO05D004809 8.4e-06 53.5 44 63.6


User provided reference genes

Program Settings