Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 2.1e-79 298.9 142 100.0
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 1.7e-25 119.8 130 45.4
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 2.2e-25 119.4 130 44.6
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 1.1e-24 117.1 129 48.1
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 5.5e-24 114.8 134 45.5
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 7.2e-24 114.4 132 46.2
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 9.4e-24 114.0 134 46.3
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 9.4e-24 114.0 126 45.2
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 1.6e-23 113.2 132 43.9
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 1.6e-23 113.2 132 43.9
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.6e-23 113.2 131 45.0
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 2.7e-23 112.5 134 45.5
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 3.6e-23 112.1 131 45.0
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 3.6e-23 112.1 140 41.4
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 3.6e-23 112.1 134 45.5
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 3.6e-23 112.1 98 52.0
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 3.6e-23 112.1 130 43.8
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 4.7e-23 111.7 132 43.9
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 4.7e-23 111.7 130 42.3
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 4.7e-23 111.7 129 44.2
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 6.1e-23 111.3 131 44.3
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 8.0e-23 110.9 132 43.2
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 8.0e-23 110.9 132 43.2
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 8.0e-23 110.9 132 43.2
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 8.0e-23 110.9 132 43.9
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 8.0e-23 110.9 134 44.0
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 1.4e-22 110.2 126 45.2
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 1.8e-22 109.8 130 43.8
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 1.8e-22 109.8 130 42.3
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 2.3e-22 109.4 130 42.3
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 3.0e-22 109.0 135 44.4
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 3.0e-22 109.0 132 45.5
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 3.0e-22 109.0 130 43.1
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 3.0e-22 109.0 130 42.3
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 3.0e-22 109.0 132 42.4
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 4.0e-22 108.6 127 46.5
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 6.8e-22 107.8 132 41.7
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 6.8e-22 107.8 130 43.1
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 6.8e-22 107.8 135 43.0
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 6.8e-22 107.8 135 43.0
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 6.8e-22 107.8 133 44.4
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 8.8e-22 107.5 133 42.9
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 8.8e-22 107.5 132 43.9
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 8.8e-22 107.5 139 39.6
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 1.2e-21 107.1 125 40.8
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 1.5e-21 106.7 125 40.0
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 1.5e-21 106.7 135 45.2
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 2.0e-21 106.3 137 42.3
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 2.6e-21 105.9 134 41.8
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 2.6e-21 105.9 141 41.1
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 2.6e-21 105.9 136 42.6
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 2.6e-21 105.9 130 42.3
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 3.4e-21 105.5 134 41.8
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 3.4e-21 105.5 136 44.1
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 3.4e-21 105.5 135 43.0
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 4.4e-21 105.1 142 42.3
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 4.4e-21 105.1 134 44.0
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 4.4e-21 105.1 132 42.4
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 9.8e-21 104.0 103 46.6
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 9.8e-21 104.0 135 41.5
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 1.3e-20 103.6 136 44.9
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 1.7e-20 103.2 134 44.0
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 2.8e-20 102.4 133 42.9
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 3.7e-20 102.1 132 41.7
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 4.8e-20 101.7 136 44.1
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 6.3e-20 101.3 136 43.4
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 8.3e-20 100.9 136 40.4
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 1.1e-19 100.5 139 42.4
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 1.1e-19 100.5 136 41.2
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 1.1e-19 100.5 136 41.2
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 1.1e-19 100.5 131 43.5
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 1.4e-19 100.1 138 40.6
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 1.8e-19 99.8 133 39.8
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 1.8e-19 99.8 133 43.6
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 2.4e-19 99.4 135 40.7
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 4.1e-19 98.6 140 39.3
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 5.4e-19 98.2 137 43.8
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 2.7e-18 95.9 93 48.4
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 5.9e-18 94.7 152 36.2
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 5.9e-18 94.7 131 41.2
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 1.0e-17 94.0 130 40.8
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 1.7e-17 93.2 140 40.7
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 5.0e-17 91.7 140 40.0
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 9.5e-16 87.4 128 37.5
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 1.6e-15 86.7 86 46.5
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 4.0e-14 82.0 163 33.7
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 6.8e-14 81.3 96 44.8
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 1.5e-13 80.1 94 44.7
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 1.3e-12 77.0 87 43.7
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 3.1e-11 72.4 87 43.7
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 1.2e-10 70.5 93 45.2
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 7.8e-10 67.8 122 34.4
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 5.0e-09 65.1 100 37.0
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 5.0e-09 65.1 96 38.5
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 1.9e-08 63.2 89 41.6
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 4.3e-08 62.0 79 43.0
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 2.8e-07 59.3 79 40.5
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 3.6e-07 58.9 77 40.3


User provided reference genes

Program Settings