Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0016s0160 Marchantia polymorpha HOM05D005975 ORTHO05D007373 0.0e+00 1754.6 933 100.0
AagrBONN_evm.TU.Sc2ySwM_228.4839 Anthoceros agrestis HOM05D005975 ORTHO05D007373 8.0e-281 970.7 870 60.2
Pp3c12_18170 Physcomitrium patens HOM05D005975 ORTHO05D007373 6.6e-275 951.0 871 59.6
Pp3c4_11450 Physcomitrium patens HOM05D005975 ORTHO05D007373 1.8e-272 943.0 949 55.8
SEGI_09157 Sequoiadendron giganteum HOM05D005975 ORTHO05D007373 3.0e-243 845.9 808 56.1
ATR0753G136 Amborella trichopoda HOM05D005975 ORTHO05D007373 6.2e-225 785.0 863 49.5
TAR374G1293 Trochodendron aralioides HOM05D005975 ORTHO05D007373 2.0e-223 780.0 861 49.2
TAR622G0473 Trochodendron aralioides HOM05D005975 ORTHO05D007373 2.1e-220 770.0 861 48.0
Aqoxy3G03906 Aquilegia oxysepala HOM05D005975 ORTHO05D007373 2.4e-216 756.5 869 47.3
MBI19_g38388_MAGBIO Magnolia biondii HOM05D005975 ORTHO05D007373 3.1e-216 756.1 852 48.5
Manes.05G139300 Manihot esculenta HOM05D005975 ORTHO05D007373 2.0e-215 753.4 845 48.6
Thecc.03G028700 Theobroma cacao HOM05D005975 ORTHO05D007373 5.9e-215 751.9 847 48.3
Ciclev10019197m.g Citrus clementina HOM05D005975 ORTHO05D007373 7.7e-215 751.5 854 47.2
Gohir.A11G007000 Gossypium hirsutum HOM05D005975 ORTHO05D007373 1.3e-214 750.7 862 47.4
CiPaw.15G127100 Carya illinoinensis HOM05D005975 ORTHO05D007373 6.5e-214 748.4 878 47.2
Gorai.007G007400 Gossypium raimondii HOM05D005975 ORTHO05D007373 1.1e-213 747.7 862 47.7
Hma1.2p1_0592F.1_g185285 Hydrangea macrophylla HOM05D005975 ORTHO05D007373 1.1e-213 747.7 860 47.6
Potri.012G060200 Populus trichocarpa HOM05D005975 ORTHO05D007373 9.4e-213 744.6 846 48.0
Duzib205G1016 Durio zibethinus HOM05D005975 ORTHO05D007373 1.2e-212 744.2 845 47.7
Gohir.D11G006100 Gossypium hirsutum HOM05D005975 ORTHO05D007373 6.1e-212 741.9 862 47.3
Potri.015G049900 Populus trichocarpa HOM05D005975 ORTHO05D007373 1.4e-211 740.7 860 47.3
RcHm_v2.0_Chr7g0184651 Rosa chinensis HOM05D005975 ORTHO05D007373 5.1e-211 738.8 860 46.6
MD14G1222100 Malus domestica HOM05D005975 ORTHO05D007373 8.8e-211 738.0 859 46.6
CSS0000913 Camellia sinensis var. sinensis HOM05D005975 ORTHO05D007373 3.3e-210 736.1 841 47.1
AUR62036958 Chenopodium quinoa HOM05D005975 ORTHO05D007373 4.3e-210 735.7 847 47.3
MD06G1211600 Malus domestica HOM05D005975 ORTHO05D007373 4.3e-210 735.7 859 47.0
ClCG06G015000 Citrullus lanatus HOM05D005975 ORTHO05D007373 7.4e-210 734.9 858 47.4
Actinidia31028 Actinidia chinensis HOM05D005975 ORTHO05D007373 1.3e-209 734.2 835 47.9
AUR62032193 Chenopodium quinoa HOM05D005975 ORTHO05D007373 2.8e-209 733.0 852 46.8
Cc04_g07500 Coffea canephora HOM05D005975 ORTHO05D007373 6.3e-209 731.9 847 47.0
Sabra12G0043300 Salix brachista HOM05D005975 ORTHO05D007373 8.2e-209 731.5 845 47.0
MELO3C017289.2 Cucumis melo HOM05D005975 ORTHO05D007373 3.1e-208 729.6 858 46.6
FvH4_5g12680 Fragaria vesca HOM05D005975 ORTHO05D007373 6.9e-208 728.4 861 46.6
CsaV3_1G003650 Cucumis sativus L. HOM05D005975 ORTHO05D007373 1.5e-207 727.2 858 46.6
PSO063G1047 Papaver somniferum HOM05D005975 ORTHO05D007373 1.5e-207 727.2 856 46.0
PGR083G1175 Punica granatum HOM05D005975 ORTHO05D007373 2.0e-207 726.9 848 46.2
Ah.11g047090 Amaranthus hybridus HOM05D005975 ORTHO05D007373 2.6e-207 726.5 845 46.7
Hund02524 Selenicereus undatus HOM05D005975 ORTHO05D007373 2.6e-207 726.5 848 47.4
FAN18G3396 Fragaria x ananassa HOM05D005975 ORTHO05D007373 3.4e-207 726.1 861 46.5
Sed0024013 Sechium edule HOM05D005975 ORTHO05D007373 3.4e-207 726.1 858 46.9
Eucgr.B00701 Eucalyptus grandis HOM05D005975 ORTHO05D007373 3.8e-206 722.6 846 46.3
FAN08G0232 Fragaria x ananassa HOM05D005975 ORTHO05D007373 6.5e-206 721.8 860 45.9
Rhsim08G0136800 Rhododendron simsii HOM05D005975 ORTHO05D007373 6.5e-206 721.8 857 45.5
Lj1g0009400 Lotus japonicus HOM05D005975 ORTHO05D007373 1.1e-205 721.1 842 46.4
Prupe.5G217600 Prunus persica HOM05D005975 ORTHO05D007373 1.4e-205 720.7 536 64.2
FAN13G1844 Fragaria x ananassa HOM05D005975 ORTHO05D007373 2.5e-205 719.9 868 45.5
FAN04G2679 Fragaria x ananassa HOM05D005975 ORTHO05D007373 9.4e-205 718.0 876 45.8
Glyma.17G121100 Glycine max HOM05D005975 ORTHO05D007373 9.4e-205 718.0 838 46.7
Solyc03g119750.4 Solanum lycopersicum HOM05D005975 ORTHO05D007373 9.4e-205 718.0 840 46.5
PSO782G2585 Papaver somniferum HOM05D005975 ORTHO05D007373 1.2e-204 717.6 855 45.6
GSVIVG01008239001 Vitis vinifera HOM05D005975 ORTHO05D007373 1.2e-204 717.6 856 45.3
PGSC0003DMG400005625 Solanum tuberosum HOM05D005975 ORTHO05D007373 3.6e-204 716.1 840 46.1
Nitab4.5_0001599g0180 Nicotiana tabacum HOM05D005975 ORTHO05D007373 4.7e-204 715.7 842 46.0
Peaxi162Scf00015g00726 Petunia axillaris HOM05D005975 ORTHO05D007373 6.1e-204 715.3 851 45.2
Phvul.009G200500 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 6.1e-204 715.3 858 45.3
Ca_23135_v3 Cicer arietinum L. HOM05D005975 ORTHO05D007373 7.9e-204 714.9 843 46.1
Sopen03g038600 Solanum pennellii HOM05D005975 ORTHO05D007373 1.4e-203 714.1 840 46.2
Hund10002 Selenicereus undatus HOM05D005975 ORTHO05D007373 2.3e-203 713.4 848 45.3
Psat1g024880 Pisum sativum HOM05D005975 ORTHO05D007373 1.1e-202 711.1 857 45.3
Oeu024324.1 Olea europaea HOM05D005975 ORTHO05D007373 4.4e-202 709.1 862 44.8
ECA232G0421 Erigeron canadensis HOM05D005975 ORTHO05D007373 9.7e-202 708.0 847 46.0
Lalb_Chr12g0197601 Lupinus albus HOM05D005975 ORTHO05D007373 1.7e-201 707.2 835 46.2
Glyma.04G152200 Glycine max HOM05D005975 ORTHO05D007373 2.2e-201 706.8 843 45.7
DCAR_015134 Daucus carota HOM05D005975 ORTHO05D007373 1.1e-200 704.5 848 45.8
SGA_v2.0_scaffold25G10981 Striga asiatica HOM05D005975 ORTHO05D007373 9.1e-200 701.4 862 44.9
VMungo1215G0359 Vigna mungo HOM05D005975 ORTHO05D007373 2.0e-199 700.3 847 45.2
AT1G73930 Arabidopsis thaliana HOM05D005975 ORTHO05D007373 2.6e-199 699.9 837 45.4
Glyma.06G210800 Glycine max HOM05D005975 ORTHO05D007373 5.9e-199 698.7 859 44.5
CARHR067040 Cardamine hirsuta HOM05D005975 ORTHO05D007373 2.2e-198 696.8 852 44.7
Dinv38586 Davidia involucrata HOM05D005975 ORTHO05D007373 3.8e-198 696.0 800 47.0
AL2G33760 Arabidopsis lyrata HOM05D005975 ORTHO05D007373 1.9e-197 693.7 839 45.4
TPR.G10356 Trifolium pratense HOM05D005975 ORTHO05D007373 2.5e-197 693.3 846 45.3
Sc10g0009550 Simmondsia chinensis HOM05D005975 ORTHO05D007373 3.2e-197 693.0 857 43.2
Haze_18619 Corylus avellana HOM05D005975 ORTHO05D007373 7.2e-197 691.8 799 47.2
Nitab4.5_0000410g0070 Nicotiana tabacum HOM05D005975 ORTHO05D007373 9.4e-197 691.4 845 45.1
Thhalv10018286m.g Eutrema salsugineum HOM05D005975 ORTHO05D007373 2.7e-196 689.9 837 44.7
THA.LOC104808292 Tarenaya hassleriana HOM05D005975 ORTHO05D007373 1.8e-195 687.2 831 43.9
EL10Ac5g11254 Beta vulgaris HOM05D005975 ORTHO05D007373 3.0e-195 686.4 800 46.8
HanXRQChr09g0269781 Helianthus annuus HOM05D005975 ORTHO05D007373 8.8e-195 684.9 846 44.8
Lj9A429T54 Lonicera japonica HOM05D005975 ORTHO05D007373 1.1e-194 684.5 799 47.2
Atru.chr9.776 Acer truncatum HOM05D005975 ORTHO05D007373 2.0e-194 683.7 804 45.4
QL10p022556 Quercus lobata HOM05D005975 ORTHO05D007373 5.7e-194 682.2 800 46.2
vmacro17674 Vaccinium macrocarpon HOM05D005975 ORTHO05D007373 2.8e-193 679.9 783 46.2
arahy.Tifrunner.gnm1.ann1.1K5T8S Arachis hypogaea HOM05D005975 ORTHO05D007373 2.4e-192 676.8 800 45.0
Migut.I00389 Erythranthe guttata HOM05D005975 ORTHO05D007373 2.4e-192 676.8 881 43.5
CBR_g30105 Chara braunii HOM05D005975 ORTHO05D007373 3.1e-192 676.4 1043 42.0
BolC2t09180H Brassica oleracea HOM05D005975 ORTHO05D007373 4.1e-192 676.0 538 61.3
A02p18950 Brassica napus HOM05D005975 ORTHO05D007373 1.2e-191 674.5 533 61.5
BraA02t06937Z Brassica rapa HOM05D005975 ORTHO05D007373 1.2e-191 674.5 532 61.7
BcaC03g15468 Brassica carinata HOM05D005975 ORTHO05D007373 1.6e-191 674.1 532 61.7
C02p31490 Brassica napus HOM05D005975 ORTHO05D007373 5.9e-191 672.2 533 61.5
Phvul.003G176900 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 1.3e-190 671.0 525 61.1
Cpa.g.sc549.1 Carica papaya HOM05D005975 ORTHO05D007373 2.2e-190 670.2 782 46.9
BcaB05g24819 Brassica carinata HOM05D005975 ORTHO05D007373 6.5e-190 668.7 532 60.3
CAN.G438.116 Capsicum annuum HOM05D005975 ORTHO05D007373 1.5e-189 667.5 802 45.3
VMungo1309G0041 Vigna mungo HOM05D005975 ORTHO05D007373 3.6e-188 662.9 799 44.9
Lsat_1_v5_gn_3_10441 Lactuca sativa HOM05D005975 ORTHO05D007373 5.7e-186 655.6 847 42.5
SMO367G0788 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 7.5e-186 655.2 838 44.9
MSTRG.22940 Avicennia marina HOM05D005975 ORTHO05D007373 3.1e-184 649.8 799 45.1
Sp5g29130 Schrenkiella parvula HOM05D005975 ORTHO05D007373 1.1e-181 641.3 839 43.0
Os03g0259700 Oryza sativa ssp. japonica HOM05D005975 ORTHO05D007373 2.5e-181 640.2 565 59.1
Aa31LG4G4220 Aethionema arabicum HOM05D005975 ORTHO05D007373 6.8e-179 632.1 837 42.4
unitig_22.g6248 Utricularia gibba HOM05D005975 ORTHO05D007373 1.3e-177 627.9 837 42.8
COL.COLO4_22722 Corchorus olitorius HOM05D005975 ORTHO05D007373 2.8e-172 610.1 467 63.0
Zm00001eb011310 Zea mays HOM05D005975 ORTHO05D007373 5.9e-167 592.4 489 60.7
Carub.0002s2070 Capsella rubella HOM05D005975 ORTHO05D007373 4.0e-163 579.7 469 60.3
Sabra15G0077800 Salix brachista HOM05D005975 ORTHO05D007373 1.1e-160 571.6 847 40.9
SalBow5G4970 Salvia bowleyana HOM05D005975 ORTHO05D007373 1.6e-159 567.8 848 39.7
Glyma.05G013100 Glycine max HOM05D005975 ORTHO05D007373 1.3e-153 548.1 525 53.0
TAR622G1340 Trochodendron aralioides HOM05D005975 ORTHO05D007373 1.2e-130 471.9 432 54.4
CDE05G1454 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 3.1e-123 447.2 738 37.3
Nn3g17719 Nelumbo nucifera HOM05D005975 ORTHO05D007373 2.5e-117 427.6 618 41.3
arahy.Tifrunner.gnm1.ann1.CEL6SJ Arachis hypogaea HOM05D005975 ORTHO05D007373 8.2e-92 342.8 271 60.5
HPP92_016580 Vanilla planifolia HOM05D005975 ORTHO05D007373 9.1e-91 339.3 252 62.7
CDE05G3359 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 8.5e-89 332.8 366 48.6
SMO146G0145 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 3.0e-86 324.3 350 52.6
HPP92_016579 Vanilla planifolia HOM05D005975 ORTHO05D007373 1.5e-77 295.4 246 61.4
BcaB05g24817 Brassica carinata HOM05D005975 ORTHO05D007373 2.2e-76 291.6 221 64.7
PSO074G0001 Papaver somniferum HOM05D005975 ORTHO05D007373 4.1e-75 287.3 490 36.7
Zm00001eb237870 Zea mays HOM05D005975 ORTHO05D007373 3.4e-69 267.7 503 35.6
Zm00001eb078910 Zea mays HOM05D005975 ORTHO05D007373 1.7e-52 212.2 149 63.8
CDE05G0573 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 3.9e-41 174.5 132 59.1
Cre14.g633500 Chlamydomonas reinhardtii HOM05D005975 ORTHO05D007373 2.0e-37 162.2 443 30.9
Nn3g18207 Nelumbo nucifera HOM05D005975 ORTHO05D007373 4.6e-26 124.4 94 60.6
Cfa019814 Carpinus fangiana HOM05D005975 ORTHO05D007373 2.4e-11 75.5 59 62.7
Dinv38585 Davidia involucrata HOM05D005975 ORTHO05D007373 3.2e-11 75.1 47 74.5


User provided reference genes

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