Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0016s0130 Marchantia polymorpha HOM05D003991 ORTHO05D004883 0.0e+00 1640.6 857 100.0
SEGI_18103 Sequoiadendron giganteum HOM05D003991 ORTHO05D004883 4.5e-222 775.4 869 52.2
SMO147G0301 Selaginella moellendorffii HOM05D003991 ORTHO05D004883 6.6e-221 771.5 863 52.5
Pp3c9_9760 Physcomitrium patens HOM05D003991 ORTHO05D004883 5.6e-212 741.9 866 50.0
Pp3c9_9870 Physcomitrium patens HOM05D003991 ORTHO05D004883 5.6e-212 741.9 866 50.0
PSO782G2666 Papaver somniferum HOM05D003991 ORTHO05D004883 1.3e-205 720.7 874 47.5
Pp3c15_7610 Physcomitrium patens HOM05D003991 ORTHO05D004883 3.3e-204 716.1 860 49.4
PSO063G1675 Papaver somniferum HOM05D003991 ORTHO05D004883 1.6e-203 713.8 873 47.8
TAR622G0714 Trochodendron aralioides HOM05D003991 ORTHO05D004883 5.8e-201 705.3 878 47.0
MBI17_g07944_MAGBIO Magnolia biondii HOM05D003991 ORTHO05D004883 1.8e-194 683.7 876 47.0
Nn4g23516 Nelumbo nucifera HOM05D003991 ORTHO05D004883 9.9e-193 677.9 869 47.4
CANSAT64G1645 Cannabis sativa HOM05D003991 ORTHO05D004883 1.2e-190 671.0 876 46.3
Lj4A124G55 Lonicera japonica HOM05D003991 ORTHO05D004883 4.6e-190 669.1 874 45.7
ATR0605G126 Amborella trichopoda HOM05D003991 ORTHO05D004883 7.8e-190 668.3 872 45.5
Pp3c10_8720 Physcomitrium patens HOM05D003991 ORTHO05D004883 3.0e-189 666.4 681 56.2
Lsat_1_v5_gn_3_96860 Lactuca sativa HOM05D003991 ORTHO05D004883 8.7e-189 664.8 875 46.1
AagrBONN_evm.TU.Sc2ySwM_344.1887 Anthoceros agrestis HOM05D003991 ORTHO05D004883 9.6e-188 661.4 879 45.8
TWI34G0665 Tripterygium wilfordii HOM05D003991 ORTHO05D004883 3.6e-187 659.4 877 45.8
Gorai.001G207000 Gossypium raimondii HOM05D003991 ORTHO05D004883 4.8e-187 659.1 874 45.7
Manes.01G103600 Manihot esculenta HOM05D003991 ORTHO05D004883 4.8e-187 659.1 876 45.1
DCAR_011017 Daucus carota HOM05D003991 ORTHO05D004883 1.8e-186 657.1 875 46.2
Ciclev10011098m.g Citrus clementina HOM05D003991 ORTHO05D004883 1.2e-185 654.4 875 45.1
COL.COLO4_10252 Corchorus olitorius HOM05D003991 ORTHO05D004883 3.4e-185 652.9 873 45.2
AL7G51550 Arabidopsis lyrata HOM05D003991 ORTHO05D004883 4.4e-185 652.5 872 44.8
FAN05G5440 Fragaria x ananassa HOM05D003991 ORTHO05D004883 5.8e-185 652.1 871 44.7
Carub.0007s3697 Capsella rubella HOM05D003991 ORTHO05D004883 1.7e-184 650.6 871 44.4
Prupe.3G248800 Prunus persica HOM05D003991 ORTHO05D004883 1.7e-184 650.6 862 45.2
Hma1.2p1_1837F.1_g304750 Hydrangea macrophylla HOM05D003991 ORTHO05D004883 2.2e-184 650.2 874 45.9
TWI32G1311 Tripterygium wilfordii HOM05D003991 ORTHO05D004883 2.2e-184 650.2 873 45.5
vmacro18126 Vaccinium macrocarpon HOM05D003991 ORTHO05D004883 2.2e-184 650.2 895 44.6
Manes.02G059600 Manihot esculenta HOM05D003991 ORTHO05D004883 3.8e-184 649.4 875 44.9
AT5G38880 Arabidopsis thaliana HOM05D003991 ORTHO05D004883 6.4e-184 648.7 872 45.0
Eucgr.I02064 Eucalyptus grandis HOM05D003991 ORTHO05D004883 6.4e-184 648.7 872 44.4
Duzib138G0045 Durio zibethinus HOM05D003991 ORTHO05D004883 2.4e-183 646.7 869 45.2
Potri.017G100300 Populus trichocarpa HOM05D003991 ORTHO05D004883 7.1e-183 645.2 882 45.5
Duzib133G0226 Durio zibethinus HOM05D003991 ORTHO05D004883 1.2e-182 644.4 862 45.6
FAN14G3680 Fragaria x ananassa HOM05D003991 ORTHO05D004883 2.1e-182 643.7 870 44.1
Peaxi162Scf01002g00121 Petunia axillaris HOM05D003991 ORTHO05D004883 2.1e-182 643.7 865 45.4
Glyma.18G274100 Glycine max HOM05D003991 ORTHO05D004883 7.8e-182 641.7 869 45.0
Glyma.08G251400 Glycine max HOM05D003991 ORTHO05D004883 1.3e-181 641.0 869 45.0
MD09G1074500 Malus domestica HOM05D003991 ORTHO05D004883 2.3e-181 640.2 876 44.4
Potri.004G114600 Populus trichocarpa HOM05D003991 ORTHO05D004883 3.9e-181 639.4 876 44.3
TPR.G23393 Trifolium pratense HOM05D003991 ORTHO05D004883 3.9e-181 639.4 873 44.4
Psat3g203280 Pisum sativum HOM05D003991 ORTHO05D004883 6.6e-181 638.6 871 43.9
CDE06G2000 Ceratophyllum demersum HOM05D003991 ORTHO05D004883 1.9e-180 637.1 875 43.4
FAN09G2010 Fragaria x ananassa HOM05D003991 ORTHO05D004883 5.6e-180 635.6 870 43.7
Hund13674 Selenicereus undatus HOM05D003991 ORTHO05D004883 5.6e-180 635.6 863 43.8
FvH4_6g46350 Fragaria vesca HOM05D003991 ORTHO05D004883 7.3e-180 635.2 870 43.8
MD17G1065900 Malus domestica HOM05D003991 ORTHO05D004883 7.3e-180 635.2 874 44.2
Ca_06908_v3 Cicer arietinum L. HOM05D003991 ORTHO05D004883 9.6e-180 634.8 860 44.7
HanXRQChr02g0043871 Helianthus annuus HOM05D003991 ORTHO05D004883 9.6e-180 634.8 867 44.6
RcHm_v2.0_Chr2g0164851 Rosa chinensis HOM05D003991 ORTHO05D004883 4.8e-179 632.5 870 44.1
CsaV3_4G010070 Cucumis sativus L. HOM05D003991 ORTHO05D004883 1.1e-178 631.3 877 44.1
Nitab4.5_0000154g0150 Nicotiana tabacum HOM05D003991 ORTHO05D004883 1.1e-178 631.3 862 44.8
Sopen03g010790 Solanum pennellii HOM05D003991 ORTHO05D004883 1.8e-178 630.6 865 44.4
CiPaw.03G082800 Carya illinoinensis HOM05D003991 ORTHO05D004883 2.4e-178 630.2 837 45.0
MELO3C026296.2 Cucumis melo HOM05D003991 ORTHO05D004883 2.4e-178 630.2 879 44.1
Thhalv10027646m.g Eutrema salsugineum HOM05D003991 ORTHO05D004883 3.1e-178 629.8 875 44.1
SGA_v2.0_scaffold148G36448 Striga asiatica HOM05D003991 ORTHO05D004883 3.1e-178 629.8 873 43.9
VMungo1383G3466 Vigna mungo HOM05D003991 ORTHO05D004883 3.1e-178 629.8 872 44.3
MSTRG.2973 Avicennia marina HOM05D003991 ORTHO05D004883 5.3e-178 629.0 867 43.7
FAN02G3988 Fragaria x ananassa HOM05D003991 ORTHO05D004883 6.9e-178 628.6 870 43.4
Lalb_Chr10g0092711 Lupinus albus HOM05D003991 ORTHO05D004883 6.9e-178 628.6 868 44.4
Cfa007697 Carpinus fangiana HOM05D003991 ORTHO05D004883 9.0e-178 628.2 874 43.7
Thhalv10003675m.g Eutrema salsugineum HOM05D003991 ORTHO05D004883 1.2e-177 627.9 858 44.5
Phvul.008G026400 Phaseolus vulgaris HOM05D003991 ORTHO05D004883 1.2e-177 627.9 874 44.3
EL10Ac2g04440 Beta vulgaris HOM05D003991 ORTHO05D004883 2.6e-177 626.7 878 43.1
Aa31LG2G3750 Aethionema arabicum HOM05D003991 ORTHO05D004883 4.5e-177 625.9 862 43.5
Atru.chr8.642 Acer truncatum HOM05D003991 ORTHO05D004883 9.9e-177 624.8 877 44.0
A06p39740 Brassica napus HOM05D003991 ORTHO05D004883 9.9e-177 624.8 855 44.7
BraA06t26889Z Brassica rapa HOM05D003991 ORTHO05D004883 9.9e-177 624.8 855 44.7
C07p38530 Brassica napus HOM05D003991 ORTHO05D004883 1.7e-176 624.0 854 44.5
BolC7t44375H Brassica oleracea HOM05D003991 ORTHO05D004883 1.7e-176 624.0 854 44.5
Lj1g0022443 Lotus japonicus HOM05D003991 ORTHO05D004883 4.9e-176 622.5 862 44.7
Sp2g18130 Schrenkiella parvula HOM05D003991 ORTHO05D004883 4.9e-176 622.5 858 44.8
BcaC06g33715 Brassica carinata HOM05D003991 ORTHO05D004883 8.4e-176 621.7 854 44.4
BcaC06g30850 Brassica carinata HOM05D003991 ORTHO05D004883 2.4e-175 620.2 855 44.8
TAR374G0063 Trochodendron aralioides HOM05D003991 ORTHO05D004883 4.2e-175 619.4 834 44.8
CSS0001564 Camellia sinensis var. sinensis HOM05D003991 ORTHO05D004883 7.1e-175 618.6 874 44.2
Sed0026923 Sechium edule HOM05D003991 ORTHO05D004883 3.5e-174 616.3 877 43.1
CAN.G427.3 Capsicum annuum HOM05D003991 ORTHO05D004883 1.0e-173 614.8 862 43.5
GSVIVG01036544001 Vitis vinifera HOM05D003991 ORTHO05D004883 1.8e-173 614.0 705 49.5
Medtr7g016900 Medicago truncatula HOM05D003991 ORTHO05D004883 8.7e-173 611.7 867 43.5
AUR62009479 Chenopodium quinoa HOM05D003991 ORTHO05D004883 1.5e-172 610.9 872 42.1
THA.LOC104822745 Tarenaya hassleriana HOM05D003991 ORTHO05D004883 1.9e-172 610.5 878 44.3
Cpa.g.sc541.1 Carica papaya HOM05D003991 ORTHO05D004883 3.3e-172 609.8 831 44.6
PGR004G0075 Punica granatum HOM05D003991 ORTHO05D004883 1.3e-171 607.8 862 43.0
Solyc03g046590.3 Solanum lycopersicum HOM05D003991 ORTHO05D004883 2.8e-171 606.7 865 43.2
arahy.Tifrunner.gnm1.ann1.YA99EJ Arachis hypogaea HOM05D003991 ORTHO05D004883 4.8e-171 605.9 864 43.6
Rhsim08G0077400 Rhododendron simsii HOM05D003991 ORTHO05D004883 2.4e-170 603.6 895 43.0
Cc07_g04500 Coffea canephora HOM05D003991 ORTHO05D004883 4.5e-169 599.4 871 43.1
Haze_14380 Corylus avellana HOM05D003991 ORTHO05D004883 7.6e-169 598.6 947 40.9
HPP92_025879 Vanilla planifolia HOM05D003991 ORTHO05D004883 1.3e-168 597.8 865 42.5
ECA246G2054 Erigeron canadensis HOM05D003991 ORTHO05D004883 2.9e-168 596.7 876 42.9
Lsat_1_v5_gn_2_90201 Lactuca sativa HOM05D003991 ORTHO05D004883 2.9e-168 596.7 871 43.5
SalBow1G2342 Salvia bowleyana HOM05D003991 ORTHO05D004883 4.2e-167 592.8 869 42.2
AUR62023158 Chenopodium quinoa HOM05D003991 ORTHO05D004883 7.1e-167 592.0 857 41.5
ClCG07G016050 Citrullus lanatus HOM05D003991 ORTHO05D004883 4.6e-166 589.3 921 40.4
arahy.Tifrunner.gnm1.ann1.T6I3L8 Arachis hypogaea HOM05D003991 ORTHO05D004883 1.8e-165 587.4 877 42.6
BraA09t36055Z Brassica rapa HOM05D003991 ORTHO05D004883 9.6e-164 581.6 849 41.9
Migut.O00382 Erythranthe guttata HOM05D003991 ORTHO05D004883 9.6e-164 581.6 869 42.2
Aqoxy3G03722 Aquilegia oxysepala HOM05D003991 ORTHO05D004883 1.6e-163 580.9 836 43.8
Gohir.A07G179600 Gossypium hirsutum HOM05D003991 ORTHO05D004883 2.8e-163 580.1 678 48.8
Gohir.D07G186400 Gossypium hirsutum HOM05D003991 ORTHO05D004883 2.8e-163 580.1 678 48.5
Sabra17G0086400 Salix brachista HOM05D003991 ORTHO05D004883 5.3e-162 575.9 973 39.9
Thecc.04G106400 Theobroma cacao HOM05D003991 ORTHO05D004883 6.9e-162 575.5 678 48.5
unitig_748.g8415 Utricularia gibba HOM05D003991 ORTHO05D004883 6.9e-162 575.5 866 41.6
C09p04400 Brassica napus HOM05D003991 ORTHO05D004883 1.5e-161 574.3 849 41.9
Nitab4.5_0001434g0090 Nicotiana tabacum HOM05D003991 ORTHO05D004883 1.7e-160 570.9 866 41.6
BolC9t53370H Brassica oleracea HOM05D003991 ORTHO05D004883 7.1e-159 565.5 849 41.1
Ah.16g101030 Amaranthus hybridus HOM05D003991 ORTHO05D004883 1.8e-157 560.8 857 41.5
CiPaw.04G052100 Carya illinoinensis HOM05D003991 ORTHO05D004883 5.1e-157 559.3 868 40.9
A09p04180 Brassica napus HOM05D003991 ORTHO05D004883 1.6e-155 554.3 850 41.2
Oeu007082.1 Olea europaea HOM05D003991 ORTHO05D004883 2.1e-150 537.3 787 42.3
HanXRQChr07g0200011 Helianthus annuus HOM05D003991 ORTHO05D004883 1.0e-149 535.0 896 39.1
ECA238G0416 Erigeron canadensis HOM05D003991 ORTHO05D004883 8.8e-149 531.9 855 39.4
BcaC04g23813 Brassica carinata HOM05D003991 ORTHO05D004883 1.7e-147 527.7 851 40.2
CSS0050035 Camellia sinensis var. sinensis HOM05D003991 ORTHO05D004883 1.0e-128 465.3 762 40.3
Sc11g0008820 Simmondsia chinensis HOM05D003991 ORTHO05D004883 2.3e-125 454.1 687 40.5
BcaC04g23825 Brassica carinata HOM05D003991 ORTHO05D004883 1.2e-124 451.8 664 43.2
Actinidia26270 Actinidia chinensis HOM05D003991 ORTHO05D004883 6.8e-109 399.4 489 46.8
Zm00001eb311840 Zea mays HOM05D003991 ORTHO05D004883 1.0e-104 385.6 491 45.6
Zm00001eb099080 Zea mays HOM05D003991 ORTHO05D004883 1.8e-101 374.8 634 38.6
MBI17_g36999_MAGBIO Magnolia biondii HOM05D003991 ORTHO05D004883 6.4e-99 366.3 536 43.1
Os09g0386600 Oryza sativa ssp. japonica HOM05D003991 ORTHO05D004883 8.3e-99 365.9 446 46.6
CBR_g36314 Chara braunii HOM05D003991 ORTHO05D004883 5.8e-92 343.2 790 32.8
ECA285G0010 Erigeron canadensis HOM05D003991 ORTHO05D004883 8.9e-85 319.3 648 34.7
CARHR263670 Cardamine hirsuta HOM05D003991 ORTHO05D004883 4.6e-73 280.4 454 40.5
SMO147G0173 Selaginella moellendorffii HOM05D003991 ORTHO05D004883 5.8e-52 210.3 567 33.3
BcaB04g19523 Brassica carinata HOM05D003991 ORTHO05D004883 8.4e-51 206.5 418 34.2
BcaC04g23815 Brassica carinata HOM05D003991 ORTHO05D004883 1.9e-47 195.3 465 36.3
Dinv33866 Davidia involucrata HOM05D003991 ORTHO05D004883 1.3e-43 182.6 216 48.1
arahy.Tifrunner.gnm1.ann1.VU455X Arachis hypogaea HOM05D003991 ORTHO05D004883 2.9e-43 181.4 233 46.4
arahy.Tifrunner.gnm1.ann1.52AFQE Arachis hypogaea HOM05D003991 ORTHO05D004883 5.5e-42 177.2 223 47.5
arahy.Tifrunner.gnm1.ann1.YE0A4T Arachis hypogaea HOM05D003991 ORTHO05D004883 5.5e-42 177.2 223 47.5
arahy.Tifrunner.gnm1.ann1.994D9I Arachis hypogaea HOM05D003991 ORTHO05D004883 2.7e-41 174.9 223 46.6
Dinv33867 Davidia involucrata HOM05D003991 ORTHO05D004883 3.1e-37 161.4 237 43.0
Aa31LG1G6630 Aethionema arabicum HOM05D003991 ORTHO05D004883 4.1e-37 161.0 292 38.0
Sp7g03030 Schrenkiella parvula HOM05D003991 ORTHO05D004883 8.5e-35 153.3 256 36.7
SMO147G0397 Selaginella moellendorffii HOM05D003991 ORTHO05D050858 1.5e-31 142.5 191 47.1
BcaC04g23820 Brassica carinata HOM05D003991 ORTHO05D004883 1.0e-27 129.8 400 29.8
MD09G1075300 Malus domestica HOM05D003991 ORTHO05D004883 1.4e-26 125.9 145 47.6
CSS0000762 Camellia sinensis var. sinensis HOM05D003991 ORTHO05D004883 9.4e-26 123.2 84 70.2
CSS0038698 Camellia sinensis var. sinensis HOM05D003991 ORTHO05D004883 9.4e-26 123.2 84 70.2
Sc11g0008830 Simmondsia chinensis HOM05D003991 ORTHO05D004883 6.1e-25 120.6 89 66.3
Dinv33865 Davidia involucrata HOM05D003991 ORTHO05D004883 1.1e-21 109.8 132 44.7
BcaC04g23819 Brassica carinata HOM05D003991 ORTHO05D004883 5.9e-20 104.0 204 35.3
HPP92_006579 Vanilla planifolia HOM05D003991 ORTHO05D004883 1.7e-19 102.4 207 36.7
HPP92_026595 Vanilla planifolia HOM05D003991 ORTHO05D004883 1.6e-17 95.9 128 41.4
BcaC04g23821 Brassica carinata HOM05D003991 ORTHO05D004883 1.8e-13 82.4 93 47.3
HPP92_006533 Vanilla planifolia HOM05D003991 ORTHO05D004883 1.6e-12 79.3 390 23.8
Medtr7g008870 Medicago truncatula HOM05D003991 ORTHO05D004883 1.0e-11 76.6 71 54.9
HPP92_028494 Vanilla planifolia HOM05D003991 ORTHO05D004883 8.5e-11 73.6 189 32.3
HPP92_026934 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.1e-10 73.2 125 39.2
arahy.Tifrunner.gnm1.ann1.Q8CATI Arachis hypogaea HOM05D003991 ORTHO05D004883 1.2e-09 69.7 77 54.5
SEGI_36661 Sequoiadendron giganteum HOM05D001164 ORTHO05D018381 2.1e-09 68.9 81 48.1
Cfa020174 Carpinus fangiana HOM05D003991 ORTHO05D004883 8.8e-08 63.5 92 42.4
Dinv33864 Davidia involucrata HOM05D003991 ORTHO05D004883 5.7e-07 60.8 103 36.9


User provided reference genes

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