Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0016s0098 Marchantia polymorpha HOM05D005512 ORTHO05D006716 0.0e+00 1392.5 746 100.0
Pp3c14_6250 Physcomitrium patens HOM05D005512 ORTHO05D006716 2.5e-22 111.7 815 27.7
AagrBONN_evm.TU.Sc2ySwM_117.2312 Anthoceros agrestis HOM05D005512 ORTHO05D006716 1.6e-21 109.0 691 27.9
Pp3c17_11650 Physcomitrium patens HOM05D005512 ORTHO05D006716 1.6e-18 99.0 793 26.9
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 6.3e-10 70.5 124 37.9
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 6.3e-10 70.5 124 37.9
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.8e-09 68.9 124 37.1
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 1.8e-09 68.9 126 38.1
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 2.4e-09 68.6 186 30.1
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 4.1e-09 67.8 124 36.3
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 5.3e-09 67.4 163 31.9
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 6.9e-09 67.0 208 30.3
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 6.9e-09 67.0 127 37.0
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 6.9e-09 67.0 125 38.4
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 9.1e-09 66.6 117 38.5
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 9.1e-09 66.6 121 39.7
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 1.2e-08 66.2 180 32.2
CDE08G0293 Ceratophyllum demersum HOM05D005512 ORTHO05D006716 1.2e-08 66.2 100 39.0
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.2e-08 66.2 125 37.6
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 1.5e-08 65.9 130 34.6
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 1.5e-08 65.9 130 34.6
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 1.5e-08 65.9 191 29.3
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 1.5e-08 65.9 191 30.4
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 2.0e-08 65.5 133 34.6
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 2.6e-08 65.1 100 41.0
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 3.4e-08 64.7 135 34.1
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 3.4e-08 64.7 150 34.0
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 5.9e-08 63.9 125 36.8
Phvul.001G188300 Phaseolus vulgaris HOM05D005512 ORTHO05D006716 5.9e-08 63.9 129 38.0
VMungo1383G0830 Vigna mungo HOM05D005512 ORTHO05D006716 1.0e-07 63.2 124 37.1
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 1.3e-07 62.8 121 37.2
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 1.3e-07 62.8 87 39.1
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 1.7e-07 62.4 124 38.7
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 1.7e-07 62.4 124 38.7
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 1.7e-07 62.4 178 31.5
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 1.7e-07 62.4 219 27.4
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 2.2e-07 62.0 92 40.2
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 2.9e-07 61.6 108 34.3
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 2.9e-07 61.6 126 35.7
PSO339G0823 Papaver somniferum HOM05D005512 ORTHO05D006716 2.9e-07 61.6 84 39.3
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 5.0e-07 60.8 126 38.1
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 6.5e-07 60.5 108 33.3
Glyma.03G193300 Glycine max HOM05D005512 ORTHO05D006716 8.5e-07 60.1 101 38.6
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 8.5e-07 60.1 90 37.8
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 1.9e-06 58.9 106 35.8
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 1.9e-06 58.9 117 32.5
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 2.5e-06 58.5 172 30.2
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 2.5e-06 58.5 118 34.7
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 3.2e-06 58.2 148 31.8
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 3.2e-06 58.2 101 38.6
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 5.5e-06 57.4 131 32.8
Nitab4.5_0011780g0020 Nicotiana tabacum HOM05D005512 ORTHO05D006716 5.5e-06 57.4 118 35.6
CAN.G397.46 Capsicum annuum HOM05D005512 ORTHO05D006716 7.2e-06 57.0 103 38.8
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 7.2e-06 57.0 212 30.7


User provided reference genes

Program Settings