Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 1.9e-83 312.4 153 100.0
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 4.0e-20 102.1 65 72.3
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 5.2e-20 101.7 55 76.4
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 8.9e-20 100.9 54 77.8
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 1.5e-19 100.1 55 74.5
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 1.5e-19 100.1 55 74.5
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 2.0e-19 99.8 73 60.3
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 2.6e-19 99.4 67 67.2
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 2.6e-19 99.4 68 67.6
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 2.6e-19 99.4 92 55.4
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 3.4e-19 99.0 68 67.6
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 3.4e-19 99.0 62 67.7
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 4.4e-19 98.6 63 65.1
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 5.8e-19 98.2 63 66.7
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 5.8e-19 98.2 63 66.7
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 5.8e-19 98.2 71 64.8
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 5.8e-19 98.2 80 61.2
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 9.8e-19 97.4 76 61.8
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 1.3e-18 97.1 92 54.3
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 1.7e-18 96.7 88 56.8
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 1.7e-18 96.7 54 74.1
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 1.7e-18 96.7 80 55.0
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 1.7e-18 96.7 89 56.2
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 2.2e-18 96.3 88 54.5
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 2.2e-18 96.3 75 60.0
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 2.2e-18 96.3 85 57.6
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 2.2e-18 96.3 71 64.8
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 2.2e-18 96.3 97 50.5
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 2.2e-18 96.3 62 66.1
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 2.9e-18 95.9 54 74.1
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 2.9e-18 95.9 54 75.9
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 3.7e-18 95.5 89 55.1
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 3.7e-18 95.5 81 58.0
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 3.7e-18 95.5 79 59.5
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 3.7e-18 95.5 99 49.5
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 4.9e-18 95.1 54 72.2
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 4.9e-18 95.1 54 74.1
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 4.9e-18 95.1 81 58.0
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 4.9e-18 95.1 81 58.0
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 4.9e-18 95.1 84 57.1
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 6.4e-18 94.7 64 65.6
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 6.4e-18 94.7 64 65.6
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 6.4e-18 94.7 90 54.4
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 8.3e-18 94.4 62 71.0
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 8.3e-18 94.4 62 71.0
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 8.3e-18 94.4 74 62.2
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 8.3e-18 94.4 96 51.0
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 1.1e-17 94.0 84 58.3
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 1.1e-17 94.0 54 77.8
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.1e-17 94.0 54 77.8
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 1.1e-17 94.0 54 74.1
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 1.1e-17 94.0 74 60.8
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 1.1e-17 94.0 54 72.2
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 1.9e-17 93.2 91 52.7
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 2.4e-17 92.8 59 67.8
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 3.2e-17 92.4 92 52.2
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 3.2e-17 92.4 68 61.8
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 3.2e-17 92.4 67 65.7
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 3.2e-17 92.4 101 49.5
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 3.2e-17 92.4 92 52.2
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 3.2e-17 92.4 60 70.0
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 3.2e-17 92.4 86 55.8
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 3.2e-17 92.4 86 55.8
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 4.1e-17 92.0 70 61.4
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 4.1e-17 92.0 85 54.1
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 4.1e-17 92.0 74 56.8
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 5.4e-17 91.7 75 57.3
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 5.4e-17 91.7 91 50.5
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 7.1e-17 91.3 88 53.4
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 7.1e-17 91.3 67 62.7
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 9.2e-17 90.9 55 70.9
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 9.2e-17 90.9 92 51.1
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 1.6e-16 90.1 70 61.4
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 1.6e-16 90.1 69 60.9
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 1.6e-16 90.1 73 61.6
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 2.1e-16 89.7 70 57.1
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 2.1e-16 89.7 99 47.5
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 2.1e-16 89.7 117 47.0
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 2.1e-16 89.7 85 52.9
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 2.7e-16 89.4 77 63.6
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 6.0e-16 88.2 47 76.6
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 6.0e-16 88.2 65 63.1
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 6.0e-16 88.2 90 50.0
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 1.0e-15 87.4 94 48.9
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 1.3e-15 87.0 78 56.4
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 1.7e-15 86.7 70 60.0
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 1.7e-15 86.7 85 51.8
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 2.3e-15 86.3 70 57.1
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 3.0e-15 85.9 54 66.7
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 3.0e-15 85.9 54 68.5
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 5.1e-15 85.1 94 50.0
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 5.1e-15 85.1 78 55.1
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 6.6e-15 84.7 92 48.9
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 6.6e-15 84.7 92 48.9
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 8.6e-15 84.3 73 57.5
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 1.1e-14 84.0 78 53.8
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 1.1e-14 84.0 47 72.3
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 1.5e-14 83.6 94 48.9
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.5e-14 83.6 47 78.7
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 1.6e-13 80.1 75 52.0
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 1.8e-12 76.6 114 43.0
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 2.4e-09 66.2 45 64.4
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 7.1e-09 64.7 72 43.1


User provided reference genes

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