Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0016s0037 Marchantia polymorpha HOM05D006140 ORTHO05D007834 0.0e+00 1721.1 876 100.0
Pp3c4_25200 Physcomitrium patens HOM05D006140 ORTHO05D007834 4.4e-71 273.9 919 27.7
AagrBONN_evm.TU.Sc2ySwM_344.4141 Anthoceros agrestis HOM05D006140 ORTHO05D007834 5.1e-35 154.1 802 25.3
SEGI_17370 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 1.3e-33 149.4 698 25.4
Atru.chr6.1557 Acer truncatum HOM05D006140 ORTHO05D007834 1.3e-22 112.8 679 21.1
Aqoxy3G02157 Aquilegia oxysepala HOM05D006140 ORTHO05D007834 6.4e-22 110.5 713 21.7
CsaV3_3G048750 Cucumis sativus L. HOM05D006140 ORTHO05D007834 1.3e-19 102.8 704 21.0
Dinv06909 Davidia involucrata HOM05D006140 ORTHO05D007834 6.7e-19 100.5 665 22.0
Sed0012782 Sechium edule HOM05D006140 ORTHO05D007834 4.3e-18 97.8 748 21.7
ATR0829G104 Amborella trichopoda HOM05D006140 ORTHO05D007834 8.1e-17 93.6 692 21.7
ClCG09G011510 Citrullus lanatus HOM05D006140 ORTHO05D007834 1.4e-16 92.8 711 20.7
Gohir.A12G205000 Gossypium hirsutum HOM05D006140 ORTHO05D007834 1.5e-15 89.4 809 21.4
Gohir.D12G207400 Gossypium hirsutum HOM05D006140 ORTHO05D007834 4.5e-15 87.8 495 22.4
DCAR_008203 Daucus carota HOM05D006140 ORTHO05D007834 5.8e-15 87.4 674 19.3
Gorai.008G222800 Gossypium raimondii HOM05D006140 ORTHO05D007834 1.0e-14 86.7 495 22.2
CiPaw.11G100200 Carya illinoinensis HOM05D006140 ORTHO05D007834 1.1e-13 83.2 380 22.4
TAR629G0094 Trochodendron aralioides HOM05D006140 ORTHO05D007834 1.4e-13 82.8 378 24.3
BcaC06g34418 Brassica carinata HOM05D006140 ORTHO05D007834 9.3e-13 80.1 609 22.8
C07p28720 Brassica napus HOM05D006140 ORTHO05D007834 9.3e-13 80.1 609 22.8
BolC7t43410H Brassica oleracea HOM05D006140 ORTHO05D007834 9.3e-13 80.1 609 22.8
MD06G1024600 Malus domestica HOM05D006140 ORTHO05D007834 9.3e-13 80.1 371 23.7
Prupe.5G025700 Prunus persica HOM05D006140 ORTHO05D007834 3.5e-12 78.2 378 24.1
Thecc.03G312700 Theobroma cacao HOM05D006140 ORTHO05D007834 3.5e-12 78.2 378 23.8
CBR_g24386 Chara braunii HOM05D006140 ORTHO05D007834 4.6e-12 77.8 531 23.4
TWI60G0968 Tripterygium wilfordii HOM05D006140 ORTHO05D007834 6.0e-12 77.4 382 23.3
Ciclev10003207m.g Citrus clementina HOM05D006140 ORTHO05D007834 1.8e-11 75.9 185 29.2
Peaxi162Scf00879g00021 Petunia axillaris HOM05D006140 ORTHO05D007834 2.3e-11 75.5 458 22.5
BcaC06g31534 Brassica carinata HOM05D006140 ORTHO05D007834 5.1e-11 74.3 617 21.6
Duzib205G1045 Durio zibethinus HOM05D006140 ORTHO05D007834 6.7e-11 73.9 365 23.8
HPP92_020808 Vanilla planifolia HOM05D006140 ORTHO05D007834 6.7e-11 73.9 697 20.9
VMungo1215G1486 Vigna mungo HOM05D006140 ORTHO05D007834 6.7e-11 73.9 693 19.8
QL12p000198 Quercus lobata HOM05D006140 ORTHO05D007834 1.1e-10 73.2 683 21.7
Phvul.002G133700 Phaseolus vulgaris HOM05D006140 ORTHO05D007834 2.5e-10 72.0 744 19.8
GSVIVG01012994001 Vitis vinifera HOM05D006140 ORTHO05D007834 3.3e-10 71.6 384 24.2
RcHm_v2.0_Chr7g0212401 Rosa chinensis HOM05D006140 ORTHO05D007834 4.3e-10 71.2 185 26.5
FAN08G2467 Fragaria x ananassa HOM05D006140 ORTHO05D007834 7.4e-10 70.5 230 26.1
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 9.6e-10 70.1 335 25.1
FAN04G1734 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.3e-09 69.7 191 28.3
EL10Ac5g11927 Beta vulgaris HOM05D006140 ORTHO05D007834 2.1e-09 68.9 181 26.0
FvH4_5g23380 Fragaria vesca HOM05D006140 ORTHO05D007834 3.7e-09 68.2 187 27.8
FAN18G2328 Fragaria x ananassa HOM05D006140 ORTHO05D007834 3.7e-09 68.2 187 27.8
Cfa012537 Carpinus fangiana HOM05D006140 ORTHO05D007834 4.8e-09 67.8 194 24.2
Actinidia14773 Actinidia chinensis HOM05D006140 ORTHO05D007834 6.2e-09 67.4 185 28.1
Rhsim07G0134400 Rhododendron simsii HOM05D006140 ORTHO05D007834 6.2e-09 67.4 185 28.1
Lsat_1_v5_gn_6_17700 Lactuca sativa HOM05D006140 ORTHO05D007834 8.2e-09 67.0 192 27.1
AT5G45610 Arabidopsis thaliana HOM05D006140 ORTHO05D007834 1.4e-08 66.2 178 32.6
FAN18G2089 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.4e-08 66.2 187 27.8
Psat2g140200 Pisum sativum HOM05D006140 ORTHO05D007834 1.4e-08 66.2 509 19.4
AUR62027322 Chenopodium quinoa HOM05D006140 ORTHO05D007834 3.1e-08 65.1 379 21.6
Nn1g01908 Nelumbo nucifera HOM05D006140 ORTHO05D007834 3.1e-08 65.1 193 28.5
Potri.003G098700 Populus trichocarpa HOM05D006140 ORTHO05D007834 3.1e-08 65.1 181 26.5
Aa31LG9G7440 Aethionema arabicum HOM05D006140 ORTHO05D007834 4.0e-08 64.7 805 19.1
CANSAT21G0745 Cannabis sativa HOM05D006140 ORTHO05D007834 6.9e-08 63.9 192 25.0
Potri.001G134800 Populus trichocarpa HOM05D006140 ORTHO05D007834 9.0e-08 63.5 184 28.8
CARHR176410 Cardamine hirsuta HOM05D006140 ORTHO05D007834 1.5e-07 62.8 122 31.1
AUR62007410 Chenopodium quinoa HOM05D006140 ORTHO05D007834 2.0e-07 62.4 391 22.0
HanXRQChr15g0469721 Helianthus annuus HOM05D006140 ORTHO05D007834 2.0e-07 62.4 185 28.1
ECA233G4025 Erigeron canadensis HOM05D006140 ORTHO05D007834 2.6e-07 62.0 209 23.9
Sc22g0001920 Simmondsia chinensis HOM05D006140 ORTHO05D007834 2.6e-07 62.0 388 22.7
AL8G13070 Arabidopsis lyrata HOM05D006140 ORTHO05D007834 5.8e-07 60.8 130 32.3
A06p46490 Brassica napus HOM05D006140 ORTHO05D007834 5.8e-07 60.8 124 30.6
BraA06t27522Z Brassica rapa HOM05D006140 ORTHO05D007834 5.8e-07 60.8 124 30.6
Thhalv10000816m.g Eutrema salsugineum HOM05D006140 ORTHO05D007834 7.6e-07 60.5 131 29.8
SMO367G0412 Selaginella moellendorffii HOM05D006140 ORTHO05D007834 1.3e-06 59.7 86 40.7
Carub.0008s0241 Capsella rubella HOM05D006140 ORTHO05D007834 2.2e-06 58.9 167 28.7
Ca_25157_v3 Cicer arietinum L. HOM05D006140 ORTHO05D007834 3.8e-06 58.2 412 20.1
PGR042G2343 Punica granatum HOM05D006140 ORTHO05D007834 4.9e-06 57.8 173 30.1
Glyma.09G210300 Glycine max HOM05D006140 ORTHO05D007834 6.5e-06 57.4 247 22.7


User provided reference genes

Program Settings