Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0016s0023 Marchantia polymorpha HOM05D005940 ORTHO05D007027 3.4e-203 711.4 356 100.0
AagrBONN_evm.TU.Sc2ySwM_344.1014 Anthoceros agrestis HOM05D005940 ORTHO05D007027 5.7e-70 268.9 361 44.3
SMO329G0058 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 2.0e-59 233.8 338 40.8
SMO201G0153 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 1.7e-58 230.7 353 41.1
Pp3c1_190 Physcomitrium patens HOM05D005940 ORTHO05D007027 1.1e-57 228.0 357 41.5
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 6.8e-55 218.8 369 37.9
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 5.8e-54 215.7 367 37.9
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 5.8e-54 215.7 383 36.6
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 4.9e-53 212.6 376 37.5
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 6.4e-53 212.2 372 37.1
Duzib114G0016 Durio zibethinus HOM05D005940 ORTHO05D007027 8.3e-53 211.8 374 36.4
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 1.1e-52 211.5 364 37.1
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 1.4e-52 211.1 368 37.2
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 1.9e-52 210.7 361 37.7
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 1.9e-52 210.7 370 36.8
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 4.1e-52 209.5 361 37.4
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 7.1e-52 208.8 364 38.2
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 7.1e-52 208.8 355 38.3
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 9.2e-52 208.4 376 36.4
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 9.2e-52 208.4 368 36.7
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 1.6e-51 207.6 358 38.0
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 2.7e-51 206.8 377 36.6
Thhalv10010491m.g Eutrema salsugineum HOM05D005940 ORTHO05D007027 1.0e-50 204.9 374 37.2
HPP92_019787 Vanilla planifolia HOM05D005940 ORTHO05D007027 1.3e-50 204.5 347 40.3
BcaB01g00141 Brassica carinata HOM05D005940 ORTHO05D007027 1.7e-50 204.1 366 37.2
BolC8t50626H Brassica oleracea HOM05D005940 ORTHO05D007027 2.3e-50 203.8 365 37.3
Carub.0005s2159 Capsella rubella HOM05D005940 ORTHO05D007027 3.0e-50 203.4 375 37.1
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 3.0e-50 203.4 330 38.2
Zm00001eb194920 Zea mays HOM05D005940 ORTHO05D007027 3.9e-50 203.0 354 37.9
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 5.1e-50 202.6 344 38.4
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 6.6e-50 202.2 377 35.8
Ca_10908_v3 Cicer arietinum L. HOM05D005940 ORTHO05D007027 8.6e-50 201.8 335 40.9
AL5G36080 Arabidopsis lyrata HOM05D005940 ORTHO05D007027 1.5e-49 201.1 379 36.4
Sp5g07450 Schrenkiella parvula HOM05D005940 ORTHO05D007027 1.5e-49 201.1 374 37.2
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 1.9e-49 200.7 369 35.5
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 1.9e-49 200.7 368 37.2
Gohir.D04G082400 Gossypium hirsutum HOM05D005940 ORTHO05D007027 1.9e-49 200.7 377 36.3
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 2.5e-49 200.3 339 38.1
BcaNung04648 Brassica carinata HOM05D005940 ORTHO05D007027 4.3e-49 199.5 365 36.7
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 4.3e-49 199.5 330 40.0
VMungo0720G1649 Vigna mungo HOM05D005940 ORTHO05D007027 5.6e-49 199.1 338 38.8
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 7.3e-49 198.7 370 36.2
BraA09t40251Z Brassica rapa HOM05D005940 ORTHO05D007027 9.5e-49 198.4 365 36.2
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 9.5e-49 198.4 375 35.7
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 1.2e-48 198.0 357 35.9
PSO357G0422 Papaver somniferum HOM05D005940 ORTHO05D007027 1.2e-48 198.0 355 36.6
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 1.6e-48 197.6 367 36.8
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 2.1e-48 197.2 335 38.2
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 2.1e-48 197.2 356 36.8
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 2.8e-48 196.8 362 36.2
Psat6g207800 Pisum sativum HOM05D005940 ORTHO05D007027 2.8e-48 196.8 339 38.6
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 4.7e-48 196.1 369 35.5
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 4.7e-48 196.1 350 36.3
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 4.7e-48 196.1 372 36.6
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 8.1e-48 195.3 362 36.5
THA.LOC104809986 Tarenaya hassleriana HOM05D005940 ORTHO05D007027 8.1e-48 195.3 373 36.7
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 1.4e-47 194.5 353 37.1
CARHR164970 Cardamine hirsuta HOM05D005940 ORTHO05D007027 1.8e-47 194.1 366 36.1
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 1.8e-47 194.1 384 34.9
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 4.0e-47 193.0 364 36.0
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 4.0e-47 193.0 376 37.2
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 5.2e-47 192.6 367 34.1
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 5.2e-47 192.6 351 37.0
CDE11G0619 Ceratophyllum demersum HOM05D005940 ORTHO05D007027 8.9e-47 191.8 327 37.0
Aa31sc33G20 Aethionema arabicum HOM05D005940 ORTHO05D007027 2.0e-46 190.7 391 35.3
A09p47960 Brassica napus HOM05D005940 ORTHO05D007027 2.0e-46 190.7 319 38.9
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 5.8e-46 189.1 371 34.5
C08p30200 Brassica napus HOM05D005940 ORTHO05D007027 7.6e-46 188.7 317 38.2
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 7.6e-46 188.7 372 33.6
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 1.7e-45 187.6 341 37.5
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 2.9e-45 186.8 363 35.5
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 3.7e-45 186.4 359 36.2
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 4.9e-45 186.0 367 34.6
Lj1A925T62 Lonicera japonica HOM05D005940 ORTHO05D007027 6.4e-45 185.7 334 36.5
ATR0594G026 Amborella trichopoda HOM05D005940 ORTHO05D007027 1.1e-44 184.9 263 41.8
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 1.9e-44 184.1 319 36.1
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 3.2e-44 183.3 359 35.9
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 7.1e-44 182.2 318 37.4
Thecc.10G067000 Theobroma cacao HOM05D005940 ORTHO05D007027 7.1e-44 182.2 304 37.5
Dinv31364 Davidia involucrata HOM05D005940 ORTHO05D007027 3.5e-43 179.9 305 36.7
arahy.Tifrunner.gnm1.ann1.N3JKH2 Arachis hypogaea HOM05D005940 ORTHO05D007027 4.6e-43 179.5 355 35.5
arahy.Tifrunner.gnm1.ann1.3UA0UH Arachis hypogaea HOM05D005940 ORTHO05D007027 1.0e-42 178.3 355 35.2
AUR62027909 Chenopodium quinoa HOM05D005940 ORTHO05D007027 1.3e-42 177.9 382 33.8
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 3.0e-42 176.8 351 35.3
COL.COLO4_23758 Corchorus olitorius HOM05D005940 ORTHO05D007027 5.2e-39 166.0 276 37.3
MELO3C011725.2 Cucumis melo HOM05D005940 ORTHO05D007027 2.0e-38 164.1 306 34.6
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 2.6e-38 163.7 331 32.9
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 4.4e-38 162.9 261 39.1
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 7.6e-38 162.2 292 35.6
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 3.8e-37 159.8 344 34.0
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 6.4e-37 159.1 228 39.5
SalBow3G3596 Salvia bowleyana HOM05D005940 ORTHO05D007027 2.1e-35 154.1 318 33.0
SEGI_22112 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 2.1e-35 154.1 205 42.0
CBR_g3301 Chara braunii HOM05D003248 ORTHO05D000301 1.0e-34 151.8 436 29.8
Manes.10G041400 Manihot esculenta HOM05D005940 ORTHO05D007027 1.0e-34 151.8 284 37.0
Rhsim09G0154600 Rhododendron simsii HOM05D005940 ORTHO05D007027 1.1e-33 148.3 273 35.5
Sabra10G0167600 Salix brachista HOM05D005940 ORTHO05D007027 2.5e-33 147.1 267 37.8
Cpa.g.sc1.266 Carica papaya HOM05D005940 ORTHO05D007027 2.8e-32 143.7 279 39.8
Gohir.A05G343900 Gossypium hirsutum HOM05D005940 ORTHO05D007027 2.0e-30 137.5 275 35.3
AT3G54970 Arabidopsis thaliana HOM05D005940 ORTHO05D007027 3.4e-30 136.7 271 37.6
Hund22470 Selenicereus undatus HOM05D005940 ORTHO05D007027 7.1e-28 129.0 324 30.9
Haze_16942 Corylus avellana HOM05D005940 ORTHO05D007027 2.1e-27 127.5 221 37.1
Sc06g0001810 Simmondsia chinensis HOM05D005940 ORTHO05D007027 1.8e-26 124.4 175 42.9
PGR142G2620 Punica granatum HOM05D005940 ORTHO05D007027 3.9e-26 123.2 193 38.3
Os02g0252600 Oryza sativa ssp. japonica HOM05D005940 ORTHO05D007027 1.3e-24 118.2 202 40.6
BcaNung04643 Brassica carinata HOM05D005940 ORTHO05D007027 1.8e-23 114.4 260 33.5
MCO14G149 Micromonas commoda HOM05D005940 ORTHO05D007027 5.8e-22 109.4 340 29.4
SMO112G0074 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 3.3e-17 93.6 162 38.3
CSS0031020 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 5.3e-15 86.3 185 32.4
Medtr1g030710 Medicago truncatula HOM05D005940 ORTHO05D007027 1.5e-14 84.7 111 43.2
PRCOL_00002492 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 4.5e-14 83.2 286 28.7
Cre01.g033516 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 1.3e-13 81.6 190 32.6
unitig_46.g18613 Utricularia gibba HOM05D005940 ORTHO05D007027 8.4e-13 79.0 191 29.8
SEGI_30186 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 2.7e-11 73.9 88 39.8
SHI28162 Sapria himalayana HOM05D005940 ORTHO05D007027 4.6e-11 73.2 157 33.8
MBI14_g28170_MAGBIO Magnolia biondii HOM05D005940 ORTHO05D007027 1.3e-10 71.6 97 38.1
PRCOL_00002155 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 7.4e-09 65.9 349 26.9
SHI28160 Sapria himalayana HOM05D000105 ORTHO05D000023 1.1e-07 62.0 76 44.7
Sopen09g009530 Solanum pennellii HOM05D005940 ORTHO05D007027 2.6e-06 57.4 80 40.0
ECA240G2370 Erigeron canadensis HOM05D005940 ORTHO05D007027 4.5e-06 56.6 54 50.0
Cre01.g033763 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 5.9e-06 56.2 58 48.3


User provided reference genes

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