Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0015s0170 Marchantia polymorpha HOM05D003285 ORTHO05D003740 3.6e-83 311.6 165 100.0
Pp3c11_15940 Physcomitrium patens HOM05D003285 ORTHO05D003740 1.1e-20 104.0 128 45.3
MBI12_g26902_MAGBIO Magnolia biondii HOM05D003285 ORTHO05D003740 2.1e-11 73.2 107 38.3
DCAR_026758 Daucus carota HOM05D003285 ORTHO05D003740 1.4e-10 70.5 59 52.5
Gohir.A07G133000 Gossypium hirsutum HOM05D003285 ORTHO05D003740 1.8e-10 70.1 92 39.1
Pp3c3_25910 Physcomitrium patens HOM05D003285 ORTHO05D003740 2.4e-10 69.7 62 51.6
Gorai.008G132600 Gossypium raimondii HOM05D003285 ORTHO05D003740 3.1e-10 69.3 95 40.0
Gohir.A12G118000 Gossypium hirsutum HOM05D003285 ORTHO05D003740 4.0e-10 68.9 95 38.9
Gohir.D12G121700 Gossypium hirsutum HOM05D003285 ORTHO05D003740 4.0e-10 68.9 95 38.9
Thecc.01G330000 Theobroma cacao HOM05D003285 ORTHO05D003740 5.3e-10 68.6 87 40.2
Nn7g38272 Nelumbo nucifera HOM05D003285 ORTHO05D003740 6.9e-10 68.2 101 33.7
Gorai.008G263600 Gossypium raimondii HOM05D003285 ORTHO05D003740 9.0e-10 67.8 59 50.8
MD01G1231000 Malus domestica HOM05D003285 ORTHO05D003740 9.0e-10 67.8 78 42.3
QL09p006144 Quercus lobata HOM05D003285 ORTHO05D003740 9.0e-10 67.8 59 50.8
CiPaw.06G038900 Carya illinoinensis HOM05D003285 ORTHO05D003740 1.2e-09 67.4 60 50.0
COL.COLO4_23077 Corchorus olitorius HOM05D003285 ORTHO05D003740 1.2e-09 67.4 87 39.1
Duzib133G1556 Durio zibethinus HOM05D003285 ORTHO05D003740 1.5e-09 67.0 87 39.1
Eucgr.A00973 Eucalyptus grandis HOM05D003285 ORTHO05D003740 2.0e-09 66.6 87 37.9
Glyma.14G189000 Glycine max HOM05D003285 ORTHO05D003740 2.0e-09 66.6 91 36.3
Gohir.A12G245200 Gossypium hirsutum HOM05D003285 ORTHO05D003740 2.0e-09 66.6 59 49.2
Gorai.001G149500 Gossypium raimondii HOM05D003285 ORTHO05D003740 2.0e-09 66.6 87 40.2
Pp3c10_17540 Physcomitrium patens HOM05D003285 ORTHO05D003740 2.0e-09 66.6 62 50.0
Cfa016138 Carpinus fangiana HOM05D003285 ORTHO05D003740 2.6e-09 66.2 83 37.3
COL.COLO4_14392 Corchorus olitorius HOM05D003285 ORTHO05D003740 2.6e-09 66.2 93 37.6
PSO384G5091 Papaver somniferum HOM05D003285 ORTHO05D003740 2.6e-09 66.2 91 39.6
CiPaw.05G208100 Carya illinoinensis HOM05D003285 ORTHO05D003740 3.4e-09 65.9 59 49.2
FAN10G0895 Fragaria x ananassa HOM05D003285 ORTHO05D003740 3.4e-09 65.9 59 50.8
Lsat_1_v5_gn_2_135500 Lactuca sativa HOM05D003285 ORTHO05D003740 3.4e-09 65.9 59 49.2
unitig_90.g27504 Utricularia gibba HOM05D003285 ORTHO05D003740 4.5e-09 65.5 59 47.5
MD17G1110400 Malus domestica HOM05D003285 ORTHO05D003740 5.8e-09 65.1 59 49.2
Medtr5g068760 Medicago truncatula HOM05D003285 ORTHO05D003740 5.8e-09 65.1 92 34.8
Prupe.3G204600 Prunus persica HOM05D003285 ORTHO05D003740 5.8e-09 65.1 59 49.2
Cc03_g11320 Coffea canephora HOM05D003285 ORTHO05D003740 7.6e-09 64.7 90 36.7
Duzib205G0511 Durio zibethinus HOM05D003285 ORTHO05D003740 7.6e-09 64.7 59 49.2
Nitab4.5_0004582g0030 Nicotiana tabacum HOM05D003285 ORTHO05D003740 7.6e-09 64.7 59 47.5
Prupe.2G321500 Prunus persica HOM05D003285 ORTHO05D003740 7.6e-09 64.7 78 39.7
PGR142G3185 Punica granatum HOM05D003285 ORTHO05D003740 7.6e-09 64.7 59 49.2
ATR0824G057 Amborella trichopoda HOM05D003285 ORTHO05D003740 1.0e-08 64.3 77 40.3
CSS0001679 Camellia sinensis var. sinensis HOM05D003285 ORTHO05D003740 1.0e-08 64.3 91 36.3
CSS0006312 Camellia sinensis var. sinensis HOM05D003285 ORTHO05D003740 1.0e-08 64.3 59 47.5
CANSAT21G0620 Cannabis sativa HOM05D003285 ORTHO05D003740 1.0e-08 64.3 59 49.2
FvH4_7g33250 Fragaria vesca HOM05D003285 ORTHO05D003740 1.0e-08 64.3 59 49.2
FAN03G0131 Fragaria x ananassa HOM05D003285 ORTHO05D003740 1.0e-08 64.3 59 49.2
Gohir.D07G137400 Gossypium hirsutum HOM05D003285 ORTHO05D003740 1.0e-08 64.3 87 39.1
Gohir.D12G245950 Gossypium hirsutum HOM05D003285 ORTHO05D003740 1.0e-08 64.3 59 49.2
Manes.07G094100 Manihot esculenta HOM05D003285 ORTHO05D003740 1.0e-08 64.3 88 37.5
RcHm_v2.0_Chr1g0383241 Rosa chinensis HOM05D003285 ORTHO05D003740 1.0e-08 64.3 59 49.2
TPR.G27920 Trifolium pratense HOM05D003285 ORTHO05D003740 1.0e-08 64.3 60 48.3
Gohir.D11G107100 Gossypium hirsutum HOM05D003285 ORTHO05D003740 1.3e-08 63.9 59 49.2
Gorai.007G114700 Gossypium raimondii HOM05D003285 ORTHO05D003740 1.3e-08 63.9 59 49.2
Lalb_Chr04g0252531 Lupinus albus HOM05D003285 ORTHO05D003740 1.3e-08 63.9 59 47.5
SalBow4G2464 Salvia bowleyana HOM05D003285 ORTHO05D003740 1.3e-08 63.9 59 47.5
SEGI_11696 Sequoiadendron giganteum HOM05D003285 ORTHO05D003740 1.3e-08 63.9 54 53.7
vmacro10170 Vaccinium macrocarpon HOM05D003285 ORTHO05D003740 1.3e-08 63.9 59 47.5
Duzib138G1807 Durio zibethinus HOM05D003285 ORTHO05D003740 1.7e-08 63.5 95 36.8
MD07G1302300 Malus domestica HOM05D003285 ORTHO05D003740 1.7e-08 63.5 78 38.5
PSO782G3038 Papaver somniferum HOM05D003285 ORTHO05D003740 1.7e-08 63.5 90 35.6
Phvul.007G085900 Phaseolus vulgaris HOM05D003285 ORTHO05D003740 1.7e-08 63.5 83 38.6
Haze_00324 Corylus avellana HOM05D003285 ORTHO05D003740 2.2e-08 63.2 83 36.1
Migut.F00970 Erythranthe guttata HOM05D003285 ORTHO05D003740 2.2e-08 63.2 59 49.2
MD09G1119600 Malus domestica HOM05D003285 ORTHO05D003740 2.2e-08 63.2 59 47.5
VMungo1309G2970 Vigna mungo HOM05D003285 ORTHO05D003740 2.2e-08 63.2 59 49.2
Aqoxy5G04377 Aquilegia oxysepala HOM05D003285 ORTHO05D003740 2.9e-08 62.8 58 48.3
CDE11G0266 Ceratophyllum demersum HOM05D003285 ORTHO05D003740 2.9e-08 62.8 60 45.0
FAN10G2316 Fragaria x ananassa HOM05D003285 ORTHO05D003740 2.9e-08 62.8 59 47.5
Glyma.02G221700 Glycine max HOM05D003285 ORTHO05D003740 2.9e-08 62.8 59 49.2
Lalb_Chr10g0103031 Lupinus albus HOM05D003285 ORTHO05D003740 3.8e-08 62.4 59 47.5
Potri.014G108600 Populus trichocarpa HOM05D003285 ORTHO05D003740 3.8e-08 62.4 86 37.2
Thecc.03G211400 Theobroma cacao HOM05D003285 ORTHO05D003740 3.8e-08 62.4 59 45.8
MSTRG.8551 Avicennia marina HOM05D003285 ORTHO05D003740 4.9e-08 62.0 59 45.8
Ca_05536_v3 Cicer arietinum L. HOM05D003285 ORTHO05D003740 4.9e-08 62.0 59 47.5
Oeu055416.1 Olea europaea HOM05D003285 ORTHO05D003740 4.9e-08 62.0 59 45.8
Atru.chr5.808 Acer truncatum HOM05D003285 ORTHO05D003740 6.5e-08 61.6 87 39.1
LjContig00155g0008247 Lotus japonicus HOM05D003285 ORTHO05D003740 8.4e-08 61.2 59 47.5
Manes.01G237800 Manihot esculenta HOM05D003285 ORTHO05D003740 8.4e-08 61.2 88 36.4
Pp3c4_11240 Physcomitrium patens HOM05D003285 ORTHO05D003740 8.4e-08 61.2 119 30.3
Sabra15G0001100 Salix brachista HOM05D003285 ORTHO05D003740 8.4e-08 61.2 59 47.5
SalBow2G0415 Salvia bowleyana HOM05D003285 ORTHO05D003740 8.4e-08 61.2 59 45.8
SalBow4G0988 Salvia bowleyana HOM05D003285 ORTHO05D003740 8.4e-08 61.2 59 45.8
SalBow7G1786 Salvia bowleyana HOM05D003285 ORTHO05D003740 8.4e-08 61.2 59 45.8
SalBow7G2502 Salvia bowleyana HOM05D003285 ORTHO05D003740 8.4e-08 61.2 59 45.8
Lj1g0024603 Lotus japonicus HOM05D003285 ORTHO05D003740 1.1e-07 60.8 59 47.5
Phvul.009G039700 Phaseolus vulgaris HOM05D003285 ORTHO05D003740 1.1e-07 60.8 59 47.5
Potri.002G182800 Populus trichocarpa HOM05D003285 ORTHO05D003740 1.1e-07 60.8 92 37.0
Ciclev10022908m.g Citrus clementina HOM05D003285 ORTHO05D003740 1.4e-07 60.5 102 34.3
FAN02G2748 Fragaria x ananassa HOM05D003285 ORTHO05D003740 1.4e-07 60.5 91 36.3
Ah.13g070960 Amaranthus hybridus HOM05D003285 ORTHO05D003740 1.9e-07 60.1 59 44.1
Gohir.D11G016800 Gossypium hirsutum HOM05D003285 ORTHO05D003740 1.9e-07 60.1 85 36.5
Oeu062810.1 Olea europaea HOM05D003285 ORTHO05D003740 1.9e-07 60.1 59 47.5
Sc13g0010640 Simmondsia chinensis HOM05D003285 ORTHO05D003740 1.9e-07 60.1 59 44.1
FvH4_6g41470 Fragaria vesca HOM05D003285 ORTHO05D003740 2.5e-07 59.7 59 45.8
Lalb_Chr08g0239451 Lupinus albus HOM05D003285 ORTHO05D003740 2.5e-07 59.7 59 45.8
HPP92_015067 Vanilla planifolia HOM05D003285 ORTHO05D003740 2.5e-07 59.7 60 41.7
FAN05G2811 Fragaria x ananassa HOM05D003285 ORTHO05D003740 3.2e-07 59.3 59 45.8
FAN05G5244 Fragaria x ananassa HOM05D003285 ORTHO05D003740 3.2e-07 59.3 59 45.8
FAN09G4844 Fragaria x ananassa HOM05D003285 ORTHO05D003740 3.2e-07 59.3 59 45.8
Medtr3g093240 Medicago truncatula HOM05D003285 ORTHO05D003740 3.2e-07 59.3 59 45.8
Sabra02G0132500 Salix brachista HOM05D003285 ORTHO05D003740 3.2e-07 59.3 92 35.9
Ciclev10024059m.g Citrus clementina HOM05D003285 ORTHO05D003740 4.2e-07 58.9 59 45.8
MELO3C024848.2 Cucumis melo HOM05D003285 ORTHO05D003740 4.2e-07 58.9 59 44.1
Gorai.007G017600 Gossypium raimondii HOM05D003285 ORTHO05D003740 4.2e-07 58.9 59 44.1
Potri.015G001800 Populus trichocarpa HOM05D003285 ORTHO05D003740 4.2e-07 58.9 59 45.8
TAR375G0298 Trochodendron aralioides HOM05D003285 ORTHO05D003740 4.2e-07 58.9 101 29.7
Psat5g070680 Pisum sativum HOM05D003285 ORTHO05D003740 5.5e-07 58.5 59 44.1
VMungo0860G0001 Vigna mungo HOM05D003285 ORTHO05D003740 5.5e-07 58.5 83 37.3
Glyma.04G226300 Glycine max HOM05D003285 ORTHO05D003740 9.3e-07 57.8 83 34.9
Zm00001eb369200 Zea mays HOM05D003285 ORTHO05D003740 9.3e-07 57.8 89 34.8
FAN14G1926 Fragaria x ananassa HOM05D003285 ORTHO05D000521 1.2e-06 57.4 56 46.4
ATR0620G008 Amborella trichopoda HOM05D003285 ORTHO05D003740 1.6e-06 57.0 83 33.7
Sopen12g015690 Solanum pennellii HOM05D003285 ORTHO05D003740 1.6e-06 57.0 58 44.8
Sed0005285 Sechium edule HOM05D003285 ORTHO05D003740 2.7e-06 56.2 59 40.7
AagrBONN_evm.TU.Sc2ySwM_344.1485 Anthoceros agrestis HOM05D003285 ORTHO05D003740 3.5e-06 55.8 57 43.9
DCAR_009103 Daucus carota HOM05D003285 ORTHO05D003740 3.5e-06 55.8 59 40.7
Carub.0006s3562 Capsella rubella HOM05D003285 ORTHO05D003740 6.0e-06 55.1 59 42.4
CAN.G34.17 Capsicum annuum HOM05D003285 ORTHO05D003740 6.0e-06 55.1 58 41.4
CARHR250100 Cardamine hirsuta HOM05D003285 ORTHO05D003740 6.0e-06 55.1 59 42.4
Gohir.A11G102600 Gossypium hirsutum HOM05D003285 ORTHO05D003740 6.0e-06 55.1 49 49.0
PGSC0003DMG400004434 Solanum tuberosum HOM05D003285 ORTHO05D003740 6.0e-06 55.1 58 43.1


User provided reference genes

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