Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 7.7e-46 186.8 95 100.0
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 1.6e-22 109.4 89 62.9
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 1.2e-19 99.8 84 52.4
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 2.7e-19 98.6 79 60.8
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 3.6e-19 98.2 79 62.0
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 3.6e-19 98.2 84 58.3
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 4.7e-19 97.8 97 54.6
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 8.0e-19 97.1 79 55.7
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 8.0e-19 97.1 90 54.4
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 1.0e-18 96.7 83 56.6
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 1.8e-18 95.9 88 55.7
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 1.8e-18 95.9 84 52.4
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 3.0e-18 95.1 79 57.0
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 3.0e-18 95.1 86 53.5
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 4.0e-18 94.7 79 57.0
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 5.2e-18 94.4 82 56.1
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 5.2e-18 94.4 80 55.0
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 5.2e-18 94.4 79 55.7
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 6.8e-18 94.0 88 51.1
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 8.8e-18 93.6 87 50.6
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 8.8e-18 93.6 84 56.0
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 8.8e-18 93.6 89 55.1
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 1.2e-17 93.2 83 53.0
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 1.2e-17 93.2 88 52.3
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 1.5e-17 92.8 88 54.5
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 1.5e-17 92.8 84 57.1
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 2.0e-17 92.4 87 51.7
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 2.0e-17 92.4 84 57.1
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 2.0e-17 92.4 84 51.2
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 2.0e-17 92.4 84 51.2
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 2.6e-17 92.0 88 51.1
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 2.6e-17 92.0 84 54.8
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 2.6e-17 92.0 84 54.8
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 3.4e-17 91.7 79 55.7
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 3.4e-17 91.7 79 57.0
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 3.4e-17 91.7 87 49.4
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 3.4e-17 91.7 87 49.4
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 3.4e-17 91.7 87 49.4
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 3.4e-17 91.7 84 50.0
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 3.4e-17 91.7 86 53.5
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 4.4e-17 91.3 79 58.2
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 4.4e-17 91.3 79 54.4
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 4.4e-17 91.3 84 53.6
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 4.4e-17 91.3 91 50.5
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 4.4e-17 91.3 89 53.9
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 4.4e-17 91.3 84 54.8
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 4.4e-17 91.3 90 50.0
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 4.4e-17 91.3 84 53.6
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 5.7e-17 90.9 84 52.4
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 5.7e-17 90.9 88 50.0
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 5.7e-17 90.9 88 50.0
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 5.7e-17 90.9 88 50.0
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 5.7e-17 90.9 88 50.0
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 5.7e-17 90.9 86 52.3
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 5.7e-17 90.9 81 55.6
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 7.5e-17 90.5 80 57.5
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 9.8e-17 90.1 80 53.8
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 9.8e-17 90.1 87 56.3
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 9.8e-17 90.1 79 54.4
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 9.8e-17 90.1 90 50.0
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 1.3e-16 89.7 79 54.4
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 1.7e-16 89.4 79 54.4
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 1.7e-16 89.4 79 54.4
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 1.7e-16 89.4 79 54.4
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 1.7e-16 89.4 80 50.0
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 2.2e-16 89.0 84 52.4
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 2.2e-16 89.0 81 51.9
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 2.2e-16 89.0 89 50.6
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 2.8e-16 88.6 96 50.0
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 2.8e-16 88.6 86 51.2
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 2.8e-16 88.6 79 53.2
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 3.7e-16 88.2 86 51.2
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 3.7e-16 88.2 89 50.6
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 4.8e-16 87.8 87 48.3
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 4.8e-16 87.8 87 48.3
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 4.8e-16 87.8 87 48.3
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 4.8e-16 87.8 82 51.2
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 4.8e-16 87.8 88 51.1
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 6.3e-16 87.4 90 51.1
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 6.3e-16 87.4 89 50.6
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 1.1e-15 86.7 86 51.2
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 1.1e-15 86.7 88 53.4
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 1.1e-15 86.7 79 53.2
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 1.1e-15 86.7 90 52.2
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 1.4e-15 86.3 80 52.5
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 1.4e-15 86.3 85 51.8
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 1.8e-15 85.9 80 52.5
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 1.8e-15 85.9 85 50.6
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 2.4e-15 85.5 88 51.1
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 3.1e-15 85.1 87 47.1
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 4.1e-15 84.7 88 50.0
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 4.1e-15 84.7 107 43.9
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 4.1e-15 84.7 92 46.7
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 4.1e-15 84.7 76 55.3
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 5.4e-15 84.3 72 55.6
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 9.1e-15 83.6 83 49.4
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 1.2e-14 83.2 85 48.2
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 1.6e-14 82.8 81 48.1
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 1.6e-14 82.8 91 49.5
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 1.6e-14 82.8 72 51.4
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 1.6e-14 82.8 72 51.4
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 2.7e-14 82.0 89 47.2
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 2.3e-13 79.0 68 55.9
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 8.6e-13 77.0 74 56.8
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 5.5e-12 74.3 72 47.2
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 9.5e-12 73.6 95 45.3
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 1.2e-11 73.2 94 43.6
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 3.6e-11 71.6 71 47.9
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 8.0e-11 70.5 88 45.5
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 8.0e-11 70.5 62 53.2
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 3.4e-09 65.1 88 42.0
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 6.3e-08 60.8 59 52.5


User provided reference genes

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