Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 1.7e-96 355.9 172 100.0
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 9.3e-42 174.1 160 54.4
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 2.7e-41 172.6 144 54.9
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 5.3e-37 158.3 130 57.7
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 1.2e-36 157.1 183 45.4
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 1.1e-31 140.6 161 42.9
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 1.1e-31 140.6 161 42.9
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 3.3e-31 139.0 160 42.5
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 5.7e-31 138.3 165 44.2
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 7.4e-31 137.9 161 42.2
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 1.6e-30 136.7 161 41.0
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 2.2e-30 136.3 160 40.6
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 2.2e-30 136.3 165 41.8
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 2.2e-30 136.3 177 40.1
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 2.8e-30 136.0 161 41.0
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 3.7e-30 135.6 161 40.4
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 3.7e-30 135.6 162 43.8
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 3.7e-30 135.6 166 44.0
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 8.2e-30 134.4 161 41.6
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.1e-29 134.0 161 41.6
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 1.1e-29 134.0 161 40.4
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 1.1e-29 134.0 158 41.1
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 1.1e-29 134.0 166 42.2
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 1.4e-29 133.7 166 41.0
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 1.4e-29 133.7 167 41.3
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 1.4e-29 133.7 164 39.6
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 1.8e-29 133.3 161 40.4
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 1.8e-29 133.3 158 41.8
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 1.8e-29 133.3 159 39.6
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 2.4e-29 132.9 177 37.9
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 2.4e-29 132.9 158 41.8
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 2.4e-29 132.9 160 40.6
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 3.1e-29 132.5 160 41.9
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 3.1e-29 132.5 161 40.4
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 4.1e-29 132.1 162 42.6
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 5.3e-29 131.7 166 42.8
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 5.3e-29 131.7 161 39.8
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 5.3e-29 131.7 161 39.8
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 5.3e-29 131.7 161 39.8
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 5.3e-29 131.7 161 39.8
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 6.9e-29 131.3 161 39.8
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 6.9e-29 131.3 160 40.6
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 6.9e-29 131.3 166 41.6
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 1.2e-28 130.6 161 39.8
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 1.2e-28 130.6 159 39.6
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 1.5e-28 130.2 161 38.5
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 1.5e-28 130.2 164 37.2
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 1.5e-28 130.2 177 38.4
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 1.5e-28 130.2 177 38.4
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 1.5e-28 130.2 177 38.4
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 2.6e-28 129.4 161 38.5
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 3.4e-28 129.0 161 39.1
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 3.4e-28 129.0 161 40.4
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 4.5e-28 128.6 161 38.5
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 5.9e-28 128.3 135 46.7
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 5.9e-28 128.3 166 39.8
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 7.6e-28 127.9 177 37.3
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 7.6e-28 127.9 178 38.8
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 1.0e-27 127.5 161 39.1
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 1.0e-27 127.5 161 38.5
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 1.3e-27 127.1 177 37.3
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.3e-27 127.1 163 39.9
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 2.2e-27 126.3 159 40.3
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 2.2e-27 126.3 163 39.3
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 2.2e-27 126.3 160 37.5
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 3.8e-27 125.6 161 38.5
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 3.8e-27 125.6 161 40.4
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 3.8e-27 125.6 160 36.9
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 3.8e-27 125.6 160 36.9
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 5.0e-27 125.2 177 36.2
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 5.0e-27 125.2 161 40.4
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 6.5e-27 124.8 125 44.0
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 6.5e-27 124.8 166 38.6
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 6.5e-27 124.8 177 36.7
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 6.5e-27 124.8 161 39.8
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 8.5e-27 124.4 174 37.9
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 8.5e-27 124.4 161 41.0
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 1.1e-26 124.0 161 39.8
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 1.1e-26 124.0 161 40.4
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 1.4e-26 123.6 123 43.1
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 2.5e-26 122.9 167 37.7
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 2.5e-26 122.9 161 39.8
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 3.2e-26 122.5 161 39.8
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 3.2e-26 122.5 161 39.8
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 3.2e-26 122.5 161 39.8
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 3.2e-26 122.5 179 38.0
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 3.2e-26 122.5 179 36.9
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 3.2e-26 122.5 146 41.8
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 5.5e-26 121.7 161 38.5
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 1.2e-25 120.6 158 39.2
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.2e-25 120.6 161 36.6
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 1.6e-25 120.2 161 39.1
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 1.0e-24 117.5 160 38.1
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 2.3e-24 116.3 195 33.3
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 1.5e-23 113.6 148 37.8
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 8.2e-22 107.8 148 35.8
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 2.0e-20 103.2 175 35.4
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 2.6e-20 102.8 161 35.4
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 1.3e-19 100.5 166 37.3
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 6.5e-19 98.2 106 45.3
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 1.1e-18 97.4 128 35.2
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 1.4e-18 97.1 163 35.0
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 3.2e-18 95.9 224 27.7
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 1.0e-16 90.9 139 34.5
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.3e-16 89.7 88 44.3
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 5.1e-16 88.6 130 33.8
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 6.7e-16 88.2 130 35.4
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 2.2e-14 83.2 85 43.5
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 4.1e-13 79.0 77 45.5
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 7.7e-12 74.7 118 32.2
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 6.5e-11 71.6 145 29.0
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 5.5e-10 68.6 161 30.4
Cre17.g696200 Chlamydomonas reinhardtii HOM05D006513 ORTHO05D008150 3.3e-07 59.3 130 26.2


User provided reference genes

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