Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 8.4e-48 193.4 97 100.0
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 2.3e-21 105.5 96 56.2
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 6.7e-21 104.0 92 56.5
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 1.4e-18 96.3 99 51.5
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 1.4e-18 96.3 99 51.5
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 1.8e-18 95.9 99 51.5
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 1.8e-18 95.9 99 51.5
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 2.4e-18 95.5 99 51.5
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 5.8e-17 90.9 107 43.9
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 2.2e-16 89.0 101 46.5
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 3.8e-16 88.2 97 45.4
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 4.9e-16 87.8 96 45.8
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 1.1e-15 86.7 96 44.8
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 1.1e-15 86.7 96 44.8
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 1.1e-15 86.7 104 43.3
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 1.9e-15 85.9 98 48.0
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 1.9e-15 85.9 109 44.0
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 2.5e-15 85.5 104 41.3
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 2.5e-15 85.5 107 41.1
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 2.5e-15 85.5 100 45.0
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 3.2e-15 85.1 108 41.7
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 3.2e-15 85.1 106 43.4
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 3.2e-15 85.1 106 43.4
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 5.5e-15 84.3 105 41.0
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 7.1e-15 84.0 99 46.5
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 9.3e-15 83.6 104 42.3
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 1.2e-14 83.2 105 43.8
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 1.2e-14 83.2 99 44.4
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 1.6e-14 82.8 96 45.8
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 1.6e-14 82.8 104 40.4
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 1.6e-14 82.8 110 42.7
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 2.7e-14 82.0 105 41.9
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 2.7e-14 82.0 106 41.5
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 2.7e-14 82.0 109 42.2
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 2.7e-14 82.0 104 42.3
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 2.7e-14 82.0 108 41.7
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 2.7e-14 82.0 111 45.0
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 2.7e-14 82.0 109 41.3
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 4.6e-14 81.3 98 44.9
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 4.6e-14 81.3 105 42.9
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 4.6e-14 81.3 109 41.3
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 6.0e-14 80.9 112 40.2
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 6.0e-14 80.9 112 42.9
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 6.0e-14 80.9 104 40.4
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 6.0e-14 80.9 99 43.4
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 7.9e-14 80.5 110 40.9
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 7.9e-14 80.5 105 43.8
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 1.0e-13 80.1 102 45.1
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 1.0e-13 80.1 102 45.1
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 1.3e-13 79.7 112 41.1
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 1.3e-13 79.7 107 40.2
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 2.3e-13 79.0 104 40.4
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 2.3e-13 79.0 106 43.4
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 2.3e-13 79.0 98 43.9
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 3.0e-13 78.6 107 41.1
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 3.0e-13 78.6 109 41.3
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 3.9e-13 78.2 108 40.7
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 3.9e-13 78.2 107 40.2
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 5.1e-13 77.8 107 41.1
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 5.1e-13 77.8 98 41.8
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 6.7e-13 77.4 104 41.3
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 6.7e-13 77.4 104 42.3
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 6.7e-13 77.4 108 38.9
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 6.7e-13 77.4 107 40.2
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 6.7e-13 77.4 107 40.2
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 6.7e-13 77.4 107 40.2
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 6.7e-13 77.4 107 40.2
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 8.7e-13 77.0 105 40.0
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 8.7e-13 77.0 106 40.6
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 8.7e-13 77.0 106 40.6
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 1.1e-12 76.6 108 39.8
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 1.5e-12 76.3 108 38.9
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 1.5e-12 76.3 108 38.9
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 1.5e-12 76.3 106 39.6
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.5e-12 76.3 107 40.2
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 1.9e-12 75.9 96 40.6
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 1.9e-12 75.9 59 61.0
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 2.5e-12 75.5 107 40.2
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 3.3e-12 75.1 105 41.0
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 4.3e-12 74.7 106 39.6
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 4.3e-12 74.7 101 37.6
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 4.3e-12 74.7 102 40.2
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 7.4e-12 73.9 107 39.3
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 7.4e-12 73.9 107 39.3
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 7.4e-12 73.9 58 56.9
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 7.4e-12 73.9 109 39.4
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 9.7e-12 73.6 107 37.4
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 9.7e-12 73.6 59 55.9
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 9.7e-12 73.6 59 57.6
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 1.6e-11 72.8 104 40.4
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 2.2e-11 72.4 106 37.7
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 2.2e-11 72.4 106 37.7
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 2.8e-11 72.0 106 37.7
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 4.8e-11 71.2 106 38.7
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 6.3e-11 70.9 58 56.9
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 8.2e-11 70.5 73 52.1
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 8.2e-11 70.5 59 57.6
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 8.2e-11 70.5 92 41.3
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 1.1e-10 70.1 58 55.2
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 2.4e-10 68.9 56 55.4
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 2.4e-10 68.9 106 34.9
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 5.3e-10 67.8 109 35.8
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 6.9e-10 67.4 59 55.9


User provided reference genes

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