Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0015s0049 Marchantia polymorpha HOM05D007317 ORTHO05D009299 1.0e-188 663.3 349 100.0
Pp3c9_12310 Physcomitrium patens HOM05D007317 ORTHO05D009299 3.2e-73 279.6 267 53.9
SEGI_21971 Sequoiadendron giganteum HOM05D007317 ORTHO05D009299 1.7e-50 204.1 280 43.6
VMungo1080G0023 Vigna mungo HOM05D007317 ORTHO05D009299 2.6e-38 163.7 270 38.5
Phvul.005G091100 Phaseolus vulgaris HOM05D007317 ORTHO05D009299 2.2e-37 160.6 270 37.4
Lj3g0025188 Lotus japonicus HOM05D007317 ORTHO05D009299 2.4e-36 157.1 282 35.1
Cfa020433 Carpinus fangiana HOM05D007317 ORTHO05D009299 5.3e-36 156.0 262 38.2
Lalb_Chr22g0357071 Lupinus albus HOM05D007317 ORTHO05D009299 1.2e-35 154.8 287 34.5
Haze_09595 Corylus avellana HOM05D007317 ORTHO05D009299 2.0e-35 154.1 272 37.1
Glyma.13G286800 Glycine max HOM05D007317 ORTHO05D009299 3.4e-35 153.3 268 36.2
TPR.G36790 Trifolium pratense HOM05D007317 ORTHO05D009299 5.9e-35 152.5 291 32.3
Glyma.12G214800 Glycine max HOM05D007317 ORTHO05D009299 1.0e-34 151.8 270 36.7
Thecc.07G054800 Theobroma cacao HOM05D007317 ORTHO05D009299 2.9e-34 150.2 283 34.3
CAN.G262.21 Capsicum annuum HOM05D007317 ORTHO05D009299 5.0e-34 149.4 260 35.4
Gorai.002G082000 Gossypium raimondii HOM05D007317 ORTHO05D009299 8.5e-34 148.7 270 35.6
Gohir.D01G060600 Gossypium hirsutum HOM05D007317 ORTHO05D009299 1.1e-33 148.3 270 35.2
Medtr2g082660 Medicago truncatula HOM05D007317 ORTHO05D009299 1.1e-33 148.3 292 33.2
Sopen12g001230 Solanum pennellii HOM05D007317 ORTHO05D009299 1.4e-33 147.9 259 34.0
CSS0009056 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 2.5e-33 147.1 275 34.5
Hma1.2p1_2644F.1_g325960 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 2.5e-33 147.1 272 36.4
CiPaw.11G183200 Carya illinoinensis HOM05D007317 ORTHO05D009299 5.5e-33 146.0 269 35.7
Manes.03G122200 Manihot esculenta HOM05D007317 ORTHO05D009299 5.5e-33 146.0 284 35.6
Ca_01757_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 9.4e-33 145.2 275 34.5
Ca_01763_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 9.4e-33 145.2 275 34.5
Solyc12g005240.1 Solanum lycopersicum HOM05D007317 ORTHO05D009299 1.6e-32 144.4 259 34.4
CSS0029394 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 2.1e-32 144.1 275 34.2
Gohir.A01G074100 Gossypium hirsutum HOM05D007317 ORTHO05D009299 2.1e-32 144.1 270 34.1
PGSC0003DMG400021808 Solanum tuberosum HOM05D007317 ORTHO05D009299 2.1e-32 144.1 259 34.0
Duzib213G1071 Durio zibethinus HOM05D007317 ORTHO05D009299 3.6e-32 143.3 279 33.0
Sc03g0009140 Simmondsia chinensis HOM05D007317 ORTHO05D009299 4.7e-32 142.9 269 33.8
unitig_578.g16764 Utricularia gibba HOM05D007317 ORTHO05D009299 4.7e-32 142.9 267 37.1
HanXRQChr03g0077301 Helianthus annuus HOM05D007317 ORTHO05D009299 6.1e-32 142.5 265 34.0
SalBow7G0069 Salvia bowleyana HOM05D007317 ORTHO05D009299 6.1e-32 142.5 266 35.7
CANSAT11G2557 Cannabis sativa HOM05D007317 ORTHO05D009299 8.0e-32 142.1 273 36.6
Peaxi162Scf01097g00014 Petunia axillaris HOM05D007317 ORTHO05D009299 1.4e-31 141.4 261 34.5
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 1.8e-31 141.0 265 35.8
Aqoxy4G02123 Aquilegia oxysepala HOM05D007317 ORTHO05D009299 3.9e-31 139.8 269 35.3
Actinidia09959 Actinidia chinensis HOM05D007317 ORTHO05D009299 5.2e-31 139.4 267 34.5
Dinv22311 Davidia involucrata HOM05D007317 ORTHO05D009299 8.8e-31 138.7 270 35.2
Nitab4.5_0000749g0020 Nicotiana tabacum HOM05D007317 ORTHO05D009299 8.8e-31 138.7 265 32.8
Psat5g249840 Pisum sativum HOM05D007317 ORTHO05D009299 1.1e-30 138.3 267 34.8
Eucgr.F00996 Eucalyptus grandis HOM05D007317 ORTHO05D009299 1.5e-30 137.9 280 34.3
Lj1C863T3 Lonicera japonica HOM05D007317 ORTHO05D009299 1.5e-30 137.9 264 33.0
QL08p013454 Quercus lobata HOM05D007317 ORTHO05D009299 1.5e-30 137.9 266 33.5
QL08p013772 Quercus lobata HOM05D007317 ORTHO05D009299 1.5e-30 137.9 266 33.5
MD11G1227700 Malus domestica HOM05D007317 ORTHO05D009299 3.3e-30 136.7 270 32.6
Prupe.4G201600 Prunus persica HOM05D007317 ORTHO05D009299 4.4e-30 136.3 263 33.1
Ah.06g183090 Amaranthus hybridus HOM05D007317 ORTHO05D009299 5.7e-30 136.0 278 32.4
Nitab4.5_0000092g0060 Nicotiana tabacum HOM05D007317 ORTHO05D009299 5.7e-30 136.0 270 31.9
EL10Ac4g07985 Beta vulgaris HOM05D007317 ORTHO05D009299 7.4e-30 135.6 272 33.5
Ciclev10008788m.g Citrus clementina HOM05D007317 ORTHO05D009299 7.4e-30 135.6 273 35.2
Os05g0500400 Oryza sativa ssp. japonica HOM05D007317 ORTHO05D009299 7.4e-30 135.6 288 35.1
TWI38G0523 Tripterygium wilfordii HOM05D007317 ORTHO05D009299 9.7e-30 135.2 281 33.5
TAR627G0019 Trochodendron aralioides HOM05D007317 ORTHO05D009299 9.7e-30 135.2 273 31.9
TAR627G0483 Trochodendron aralioides HOM05D007317 ORTHO05D009299 1.3e-29 134.8 269 32.7
Zm00001eb291900 Zea mays HOM05D007317 ORTHO05D009299 1.7e-29 134.4 273 34.4
PGR083G0561 Punica granatum HOM05D007317 ORTHO05D009299 3.7e-29 133.3 309 32.7
Sed0024877 Sechium edule HOM05D007317 ORTHO05D009299 4.8e-29 132.9 271 33.9
Sabra11G0119300 Salix brachista HOM05D007317 ORTHO05D009299 6.3e-29 132.5 265 32.5
Atru.chr2.3195 Acer truncatum HOM05D007317 ORTHO05D009299 8.2e-29 132.1 274 34.3
Migut.H01861 Erythranthe guttata HOM05D007317 ORTHO05D009299 8.2e-29 132.1 263 34.2
SGA_v2.0_scaffold320G48570 Striga asiatica HOM05D007317 ORTHO05D009299 1.1e-28 131.7 265 35.5
RcHm_v2.0_Chr5g0037211 Rosa chinensis HOM05D007317 ORTHO05D009299 1.4e-28 131.3 266 32.7
Nn1g03706 Nelumbo nucifera HOM05D007317 ORTHO05D009299 3.1e-28 130.2 279 31.9
Potri.011G132500 Populus trichocarpa HOM05D007317 ORTHO05D009299 3.1e-28 130.2 265 32.1
Aa31LG8G7460 Aethionema arabicum HOM05D007317 ORTHO05D009299 4.1e-28 129.8 294 31.3
ATR0733G181 Amborella trichopoda HOM05D007317 ORTHO05D009299 4.1e-28 129.8 289 31.5
Atru.chr2.3185 Acer truncatum HOM05D007317 ORTHO05D009299 5.3e-28 129.4 274 34.3
FvH4_3g21740 Fragaria vesca HOM05D007317 ORTHO05D009299 7.0e-28 129.0 271 33.9
PSO541G0431 Papaver somniferum HOM05D007317 ORTHO05D009299 1.2e-27 128.3 270 32.2
AUR62015637 Chenopodium quinoa HOM05D007317 ORTHO05D009299 4.5e-27 126.3 273 32.6
ClCG10G005750 Citrullus lanatus HOM05D007317 ORTHO05D009299 5.9e-27 125.9 279 31.2
COL.COLO4_09559 Corchorus olitorius HOM05D007317 ORTHO05D009299 1.3e-26 124.8 275 30.9
CARHR096490 Cardamine hirsuta HOM05D007317 ORTHO05D009299 1.7e-26 124.4 271 32.8
Thhalv10021080m.g Eutrema salsugineum HOM05D007317 ORTHO05D009299 2.2e-26 124.0 270 34.1
PSO675G5311 Papaver somniferum HOM05D007317 ORTHO05D009299 2.2e-26 124.0 270 31.5
AUR62029234 Chenopodium quinoa HOM05D007317 ORTHO05D009299 2.9e-26 123.6 275 31.3
MCO11G003 Micromonas commoda HOM05D007317 ORTHO05D009299 2.9e-26 123.6 278 31.7
THA.LOC104825404 Tarenaya hassleriana HOM05D007317 ORTHO05D009299 6.5e-26 122.5 267 31.5
CsaV3_3G005440 Cucumis sativus L. HOM05D007317 ORTHO05D009299 2.5e-25 120.6 290 30.7
MBI02_g29710_MAGBIO Magnolia biondii HOM05D007317 ORTHO05D009299 2.5e-25 120.6 271 32.1
AT3G20680 Arabidopsis thaliana HOM05D007317 ORTHO05D009299 4.2e-25 119.8 273 35.9
AL3G34590 Arabidopsis lyrata HOM05D007317 ORTHO05D009299 7.2e-25 119.0 273 35.9
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 7.2e-25 119.0 274 31.4
MELO3C025426.2 Cucumis melo HOM05D007317 ORTHO05D009299 7.2e-25 119.0 287 31.0
Sp3g18720 Schrenkiella parvula HOM05D007317 ORTHO05D009299 1.2e-24 118.2 273 34.1
BraA01t03516Z Brassica rapa HOM05D007317 ORTHO05D009299 1.6e-24 117.9 296 31.8
A01p34120 Brassica napus HOM05D007317 ORTHO05D009299 2.1e-24 117.5 296 31.8
Carub.0003s2066 Capsella rubella HOM05D007317 ORTHO05D009299 4.7e-24 116.3 274 32.5
BcaB04g20638 Brassica carinata HOM05D007317 ORTHO05D009299 6.1e-24 115.9 277 32.9
GSVIVG01014590001 Vitis vinifera HOM05D007317 ORTHO05D009299 1.4e-23 114.8 285 31.6
C01p43540 Brassica napus HOM05D007317 ORTHO05D009299 4.0e-23 113.2 295 31.9
BolC1t04315H Brassica oleracea HOM05D007317 ORTHO05D009299 4.0e-23 113.2 295 31.9
Cc05_g13190 Coffea canephora HOM05D007317 ORTHO05D009299 1.2e-22 111.7 141 41.1
BcaC09g49009 Brassica carinata HOM05D007317 ORTHO05D009299 2.6e-22 110.5 297 33.3
Hma1.2p1_2644F.1_g325950 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 2.2e-21 107.5 272 32.0
FAN21G2436 Fragaria x ananassa HOM05D007317 ORTHO05D009299 1.5e-17 94.7 116 41.4
Cre08.g369000 Chlamydomonas reinhardtii HOM05D007317 ORTHO05D009299 2.7e-16 90.5 280 29.3
PGSC0003DMG400016049 Solanum tuberosum HOM05D007317 ORTHO05D009299 7.5e-14 82.4 124 33.9
Lalb_Chr14g0366071 Lupinus albus HOM05D007317 ORTHO05D009299 8.0e-08 62.4 191 27.2
Cpa.g.sc97.77 Carica papaya HOM05D007317 ORTHO05D009299 6.8e-07 59.3 165 29.7


User provided reference genes

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