Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 6.4e-60 233.8 112 100.0
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 4.2e-35 151.4 103 64.1
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 2.0e-32 142.5 105 61.0
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 4.1e-30 134.8 98 55.1
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 5.3e-30 134.4 98 55.1
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 6.9e-30 134.0 99 57.6
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 6.9e-30 134.0 99 57.6
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 6.9e-30 134.0 99 57.6
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 6.9e-30 134.0 99 57.6
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 1.2e-29 133.3 107 55.1
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 1.5e-29 132.9 98 54.1
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 2.6e-29 132.1 99 55.6
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 5.9e-29 131.0 99 55.6
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 5.9e-29 131.0 105 52.4
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 7.7e-29 130.6 105 54.3
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 7.7e-29 130.6 99 52.5
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 1.0e-28 130.2 96 57.3
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 1.0e-28 130.2 99 55.6
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 2.2e-28 129.0 107 53.3
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 2.9e-28 128.6 105 55.2
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 3.8e-28 128.3 101 51.5
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 5.0e-28 127.9 99 54.5
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 5.0e-28 127.9 99 51.5
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 6.5e-28 127.5 109 53.2
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 1.1e-27 126.7 98 53.1
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 2.5e-27 125.6 99 50.5
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 2.5e-27 125.6 99 51.5
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 2.5e-27 125.6 101 52.5
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 4.2e-27 124.8 87 59.8
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 9.4e-27 123.6 99 51.5
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 9.4e-27 123.6 99 52.5
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 9.4e-27 123.6 97 50.5
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 9.4e-27 123.6 94 53.2
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.6e-26 122.9 98 52.0
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 1.6e-26 122.9 99 51.5
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 1.6e-26 122.9 99 51.5
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 2.7e-26 122.1 99 52.5
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 3.6e-26 121.7 101 51.5
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 3.6e-26 121.7 101 51.5
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 3.6e-26 121.7 98 53.1
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 3.6e-26 121.7 104 51.9
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 3.6e-26 121.7 107 52.3
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 4.7e-26 121.3 91 56.0
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 6.1e-26 120.9 99 51.5
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 8.0e-26 120.6 98 51.0
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 8.0e-26 120.6 95 54.7
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 1.4e-25 119.8 99 50.5
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 1.4e-25 119.8 99 50.5
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 1.4e-25 119.8 99 49.5
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 1.8e-25 119.4 106 49.1
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.8e-25 119.4 102 50.0
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 3.9e-25 118.2 99 49.5
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 5.2e-25 117.9 99 48.5
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 5.2e-25 117.9 90 53.3
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 6.7e-25 117.5 99 49.5
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 6.7e-25 117.5 99 49.5
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 8.8e-25 117.1 100 51.0
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 8.8e-25 117.1 99 49.5
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 1.1e-24 116.7 85 56.5
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.1e-24 116.7 87 55.2
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 1.1e-24 116.7 99 49.5
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 1.5e-24 116.3 90 51.1
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 2.0e-24 115.9 99 50.5
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 2.6e-24 115.5 91 49.5
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 2.6e-24 115.5 104 49.0
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 5.7e-24 114.4 112 48.2
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 2.2e-23 112.5 106 44.3
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 3.7e-23 111.7 102 47.1
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 4.8e-23 111.3 99 49.5
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 4.8e-23 111.3 99 49.5
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.1e-22 110.2 84 54.8
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 3.1e-22 108.6 92 53.3
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 4.1e-22 108.2 93 46.2
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 5.3e-22 107.8 99 47.5
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 7.0e-22 107.5 101 47.5
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 2.0e-21 105.9 104 45.2
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 2.0e-21 105.9 104 45.2
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 2.0e-21 105.9 99 43.4
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 2.6e-21 105.5 93 50.5
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 3.5e-21 105.1 62 64.5
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 5.9e-21 104.4 100 50.0
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 7.7e-21 104.0 101 46.5
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 1.3e-20 103.2 105 47.6
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 2.2e-20 102.4 101 47.5
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 2.9e-20 102.1 105 46.7
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 3.8e-20 101.7 101 46.5
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 5.0e-20 101.3 88 51.1
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 6.5e-20 100.9 99 43.4
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 8.5e-20 100.5 98 46.9
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 1.1e-19 100.1 95 46.3
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 2.5e-19 99.0 85 48.2
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 3.2e-19 98.6 101 45.5
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 7.2e-19 97.4 65 61.5
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 9.4e-19 97.1 105 46.7
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 2.7e-18 95.5 118 39.8
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 8.0e-18 94.0 93 43.0
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 8.0e-18 94.0 93 43.0
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 1.8e-17 92.8 91 47.3
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 1.8e-17 92.8 83 44.6
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 1.2e-16 90.1 87 43.7
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 1.8e-14 82.8 107 37.4
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 4.5e-13 78.2 97 35.1
MCO14G029 Micromonas commoda HOM05D007077 ORTHO05D008853 5.9e-13 77.8 109 34.9
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 5.9e-13 77.8 52 55.8
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 1.7e-12 76.3 86 39.5
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 5.0e-12 74.7 111 34.2
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 4.2e-11 71.6 103 35.0
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 5.5e-11 71.2 103 33.0
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 4.7e-10 68.2 44 56.8
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 2.0e-08 62.8 87 34.5


User provided reference genes

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