Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 3.8e-282 974.2 492 100.0
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 3.3e-169 599.0 392 74.0
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 7.5e-169 597.8 399 73.2
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 1.3e-168 597.0 403 73.2
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 1.4e-167 593.6 396 73.0
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 2.0e-166 589.7 388 74.0
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 2.7e-166 589.3 405 72.1
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 5.9e-166 588.2 400 72.2
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 5.9e-166 588.2 400 71.8
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 5.9e-166 588.2 400 72.2
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 7.7e-166 587.8 399 70.9
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 2.2e-165 586.3 385 73.8
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 2.2e-165 586.3 406 70.9
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 3.8e-165 585.5 408 71.1
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 3.8e-165 585.5 402 70.9
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 5.0e-165 585.1 408 71.1
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 5.0e-165 585.1 416 70.0
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 6.5e-165 584.7 400 71.5
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 6.5e-165 584.7 401 71.8
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 6.5e-165 584.7 399 71.2
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 8.5e-165 584.3 402 71.4
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 1.1e-164 583.9 473 64.1
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 1.9e-164 583.2 399 70.9
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 1.9e-164 583.2 407 70.3
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 3.2e-164 582.4 388 73.5
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 5.5e-164 581.6 403 71.0
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 5.5e-164 581.6 421 68.6
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 5.5e-164 581.6 397 71.5
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 1.2e-163 580.5 450 66.4
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 2.1e-163 579.7 413 69.7
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 2.7e-163 579.3 422 67.8
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 3.6e-163 578.9 412 68.7
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 3.6e-163 578.9 401 70.8
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 3.6e-163 578.9 397 70.8
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 3.6e-163 578.9 383 73.6
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 8.0e-163 577.8 384 72.7
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 8.0e-163 577.8 385 72.7
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 1.0e-162 577.4 384 72.7
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 1.0e-162 577.4 405 70.4
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 1.0e-162 577.4 414 68.4
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 1.4e-162 577.0 405 70.4
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 1.8e-162 576.6 429 67.6
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 2.3e-162 576.2 413 70.0
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 3.0e-162 575.9 413 70.0
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 3.0e-162 575.9 385 72.5
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 5.2e-162 575.1 425 68.0
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 5.2e-162 575.1 408 69.9
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 6.8e-162 574.7 414 68.8
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 6.8e-162 574.7 409 68.9
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 6.8e-162 574.7 418 68.9
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 8.8e-162 574.3 414 68.4
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 1.2e-161 573.9 393 71.0
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.5e-161 573.5 384 72.7
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 1.5e-161 573.5 385 72.7
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 2.0e-161 573.2 384 72.7
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 3.4e-161 572.4 416 69.2
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 4.4e-161 572.0 415 68.2
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 5.7e-161 571.6 384 72.4
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 5.7e-161 571.6 434 68.0
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 7.5e-161 571.2 384 72.4
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 1.7e-160 570.1 436 67.0
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 1.7e-160 570.1 472 63.3
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 2.8e-160 569.3 424 66.7
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 2.8e-160 569.3 383 72.1
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 3.7e-160 568.9 399 70.9
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 6.3e-160 568.2 386 72.8
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 6.3e-160 568.2 472 62.5
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 8.3e-160 567.8 387 72.6
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 8.3e-160 567.8 425 67.3
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 8.3e-160 567.8 449 64.8
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 3.1e-159 565.8 437 65.9
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 4.1e-159 565.5 391 69.6
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 7.0e-159 564.7 437 65.7
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 1.2e-158 563.9 391 71.1
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 1.6e-158 563.5 451 64.3
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 2.7e-158 562.8 384 70.6
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 4.5e-158 562.0 391 69.6
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 7.7e-158 561.2 400 68.5
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 1.0e-157 560.8 404 68.3
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 2.5e-156 556.2 447 62.0
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 7.2e-156 554.7 394 68.3
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 2.8e-155 552.7 398 69.1
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 7.5e-153 544.7 424 64.9
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 7.0e-151 538.1 356 73.3
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 1.0e-149 534.3 453 62.7
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 3.3e-148 529.3 353 72.0
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 9.5e-148 527.7 434 60.1
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 1.6e-147 526.9 371 68.7
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 6.1e-147 525.0 386 67.9
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 1.8e-146 523.5 413 65.6
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 3.4e-145 519.2 458 61.1
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 2.3e-141 506.5 415 62.9
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 9.5e-140 501.1 408 63.2
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 5.2e-138 495.4 302 78.5
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 2.0e-137 493.4 333 73.0
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 6.4e-136 488.4 333 71.5
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 2.1e-134 483.4 384 64.8
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 2.7e-134 483.0 309 75.1
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 4.6e-134 482.3 308 76.9
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 4.3e-132 475.7 410 58.5
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 5.1e-125 452.2 454 56.6
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 3.3e-124 449.5 293 73.4
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 9.6e-116 421.4 386 59.1
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 3.4e-113 412.9 253 76.3
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 7.1e-111 405.2 412 49.0
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 3.5e-110 402.9 397 55.7
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.5e-108 397.5 236 78.0
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.5e-108 397.5 236 78.0
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 9.6e-108 394.8 240 77.9
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 2.0e-105 387.1 280 67.1
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 2.1e-91 340.5 418 47.8
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 4.0e-90 336.3 333 54.1
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 6.5e-72 275.8 318 44.3
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 9.4e-63 245.4 245 55.5
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 9.7e-60 235.3 336 40.2
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 8.5e-56 222.2 402 36.1
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 5.7e-52 209.5 390 36.2
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 3.8e-48 196.8 349 35.8
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 2.2e-43 181.0 385 32.2
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 5.2e-37 159.8 368 30.2
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 5.9e-33 146.4 123 60.2
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 1.6e-30 138.3 96 68.8
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 1.6e-30 138.3 76 81.6
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 9.8e-28 129.0 119 58.0
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 1.4e-21 108.6 106 52.8
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 9.8e-20 102.4 101 53.5
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 9.8e-20 102.4 51 84.3
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 7.6e-12 76.3 45 84.4
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 2.9e-11 74.3 159 30.8


User provided reference genes

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