Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0015s0012 Marchantia polymorpha HOM05D006466 ORTHO05D008084 4.6e-147 524.6 280 100.0
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 2.8e-35 153.3 266 42.9
Pp3c3_19850 Physcomitrium patens HOM05D006466 ORTHO05D008084 2.6e-33 146.7 298 38.9
SEGI_30297 Sequoiadendron giganteum HOM05D006466 ORTHO05D008084 2.9e-32 143.3 284 38.4
Ah.12g056750 Amaranthus hybridus HOM05D006466 ORTHO05D008084 4.3e-28 129.4 256 38.3
DCAR_008489 Daucus carota HOM05D005079 ORTHO05D006362 1.2e-25 121.3 251 36.3
Ciclev10005762m.g Citrus clementina HOM05D006466 ORTHO05D008084 7.6e-25 118.6 271 36.2
PGSC0003DMG401004755 Solanum tuberosum HOM05D006466 ORTHO05D008084 7.6e-25 118.6 263 35.7
MELO3C005537.2 Cucumis melo HOM05D006466 ORTHO05D008084 9.9e-25 118.2 255 36.5
Solyc08g078740.1 Solanum lycopersicum HOM05D006466 ORTHO05D008084 9.9e-25 118.2 263 35.7
Sopen08g027210 Solanum pennellii HOM05D006466 ORTHO05D008084 9.9e-25 118.2 263 35.7
HPP92_014482 Vanilla planifolia HOM05D006466 ORTHO05D008084 2.2e-24 117.1 258 37.2
Migut.A00968 Erythranthe guttata HOM05D006466 ORTHO05D008084 5.4e-23 112.5 194 39.7
MSTRG.12091 Avicennia marina HOM05D006466 ORTHO05D008084 7.1e-23 112.1 230 40.4
CsaV3_5G004180 Cucumis sativus L. HOM05D006466 ORTHO05D008084 7.1e-23 112.1 256 35.5
FAN13G1623 Fragaria x ananassa HOM05D006466 ORTHO05D008084 1.2e-22 111.3 253 36.4
Potri.001G123200 Populus trichocarpa HOM05D006466 ORTHO05D008084 1.2e-22 111.3 253 35.2
SHI10480 Sapria himalayana HOM05D006466 ORTHO05D008084 1.2e-22 111.3 256 37.9
unitig_61.g26196 Utricularia gibba HOM05D006466 ORTHO05D008084 1.6e-22 110.9 262 36.6
Lsat_1_v5_gn_3_521 Lactuca sativa HOM05D006466 ORTHO05D008084 4.6e-22 109.4 262 35.9
Sabra01G0094900 Salix brachista HOM05D006466 ORTHO05D008084 6.0e-22 109.0 253 35.6
Hma1.2p1_2380F.1_g320960 Hydrangea macrophylla HOM05D006466 ORTHO05D008084 7.8e-22 108.6 264 34.1
PGR031G1557 Punica granatum HOM05D006466 ORTHO05D008084 7.8e-22 108.6 262 33.2
ClCG01G004000 Citrullus lanatus HOM05D006466 ORTHO05D008084 1.3e-21 107.8 257 35.0
Eucgr.D02068 Eucalyptus grandis HOM05D006466 ORTHO05D008084 1.3e-21 107.8 253 37.5
FAN04G2180 Fragaria x ananassa HOM05D006466 ORTHO05D008084 1.3e-21 107.8 253 36.0
SalBow6G4398 Salvia bowleyana HOM05D006466 ORTHO05D008084 2.3e-21 107.1 187 37.4
SGA_v2.0_scaffold120G32877 Striga asiatica HOM05D006466 ORTHO05D008084 3.0e-21 106.7 199 40.7
Sp7g15110 Schrenkiella parvula HOM05D006466 ORTHO05D008084 3.9e-21 106.3 268 36.6
Sed0012351 Sechium edule HOM05D006466 ORTHO05D008084 3.9e-21 106.3 249 36.9
RcHm_v2.0_Chr7g0203001 Rosa chinensis HOM05D006466 ORTHO05D008084 5.1e-21 105.9 262 34.0
Carub.0007s2494 Capsella rubella HOM05D006466 ORTHO05D008084 6.6e-21 105.5 249 36.9
TWI81G0148 Tripterygium wilfordii HOM05D006466 ORTHO05D008084 6.6e-21 105.5 253 36.0
CDE02G4728 Ceratophyllum demersum HOM05D006466 ORTHO05D008084 8.6e-21 105.1 247 35.2
Lj4g0024258 Lotus japonicus HOM05D006466 ORTHO05D008084 8.6e-21 105.1 187 39.6
Gohir.A12G217700 Gossypium hirsutum HOM05D006466 ORTHO05D008084 1.1e-20 104.8 239 38.1
PSO528G0015 Papaver somniferum HOM05D006466 ORTHO05D008084 1.5e-20 104.4 254 35.4
Thecc.03G253200 Theobroma cacao HOM05D006466 ORTHO05D008084 1.9e-20 104.0 257 36.6
Thhalv10026056m.g Eutrema salsugineum HOM05D006466 ORTHO05D008084 2.5e-20 103.6 267 34.5
FAN08G0853 Fragaria x ananassa HOM05D006466 ORTHO05D008084 3.3e-20 103.2 185 40.5
Aqoxy6G01886 Aquilegia oxysepala HOM05D006466 ORTHO05D008084 4.3e-20 102.8 277 35.0
Lj1A353T9 Lonicera japonica HOM05D006466 ORTHO05D008084 4.3e-20 102.8 249 34.1
GSVIVG01001313001 Vitis vinifera HOM05D006466 ORTHO05D008084 4.3e-20 102.8 266 32.3
QL12p012545 Quercus lobata HOM05D006466 ORTHO05D008084 5.6e-20 102.4 262 32.8
Gorai.008G235900 Gossypium raimondii HOM05D006466 ORTHO05D008084 7.3e-20 102.1 236 37.7
Nitab4.5_0008481g0010 Nicotiana tabacum HOM05D006466 ORTHO05D008084 7.3e-20 102.1 240 36.2
Nitab4.5_0000312g0170 Nicotiana tabacum HOM05D006466 ORTHO05D008084 9.6e-20 101.7 240 35.4
BcaNung02868 Brassica carinata HOM05D006466 ORTHO05D008084 1.2e-19 101.3 271 35.8
Gohir.D12G220200 Gossypium hirsutum HOM05D006466 ORTHO05D008084 1.6e-19 100.9 236 37.7
PSO170G1975 Papaver somniferum HOM05D006466 ORTHO05D008084 2.1e-19 100.5 259 35.1
Actinidia27463 Actinidia chinensis HOM05D006466 ORTHO05D008084 4.7e-19 99.4 252 36.1
CARHR222950 Cardamine hirsuta HOM05D006466 ORTHO05D008084 4.7e-19 99.4 252 36.9
Manes.15G178400 Manihot esculenta HOM05D006466 ORTHO05D008084 4.7e-19 99.4 262 34.7
Dinv39131 Davidia involucrata HOM05D006466 ORTHO05D008084 6.2e-19 99.0 253 35.2
FvH4_5g18710 Fragaria vesca HOM05D006466 ORTHO05D008084 6.2e-19 99.0 248 34.7
TAR375G0032 Trochodendron aralioides HOM05D006466 ORTHO05D008084 6.2e-19 99.0 231 34.6
Aa31LG2G12660 Aethionema arabicum HOM05D006466 ORTHO05D008084 8.1e-19 98.6 268 34.7
AL7G38350 Arabidopsis lyrata HOM05D006466 ORTHO05D008084 8.1e-19 98.6 249 33.7
AL7G38400 Arabidopsis lyrata HOM05D006466 ORTHO05D008084 8.1e-19 98.6 249 33.7
FAN18G0606 Fragaria x ananassa HOM05D006466 ORTHO05D008084 8.1e-19 98.6 252 34.5
ECA232G3467 Erigeron canadensis HOM05D006466 ORTHO05D008084 1.4e-18 97.8 247 37.2
Psat4g071640 Pisum sativum HOM05D006466 ORTHO05D008084 1.8e-18 97.4 197 39.1
CiPaw.11G153200 Carya illinoinensis HOM05D006466 ORTHO05D008084 2.4e-18 97.1 267 34.5
Manes.01G079600 Manihot esculenta HOM05D006466 ORTHO05D008084 2.4e-18 97.1 251 33.5
Cc08_g12600 Coffea canephora HOM05D006466 ORTHO05D008084 3.1e-18 96.7 187 38.0
arahy.Tifrunner.gnm1.ann1.LISY29 Arachis hypogaea HOM05D006466 ORTHO05D008084 4.0e-18 96.3 268 33.6
Prupe.5G071300 Prunus persica HOM05D006466 ORTHO05D008084 4.0e-18 96.3 185 38.4
Rhsim07G0108000 Rhododendron simsii HOM05D006466 ORTHO05D008084 4.0e-18 96.3 183 39.3
Cfa012739 Carpinus fangiana HOM05D006466 ORTHO05D008084 5.2e-18 95.9 252 34.5
Manes.15G178500 Manihot esculenta HOM05D006466 ORTHO05D008084 6.8e-18 95.5 262 34.4
ATR0193G040 Amborella trichopoda HOM05D006466 ORTHO05D008084 8.9e-18 95.1 190 36.8
MD04G1088600 Malus domestica HOM05D006466 ORTHO05D008084 1.2e-17 94.7 190 37.4
Sed0026776 Sechium edule HOM05D006466 ORTHO05D008084 1.5e-17 94.4 262 34.0
AT4G16535 Arabidopsis thaliana HOM05D006466 ORTHO05D008084 2.6e-17 93.6 251 37.1
Haze_07889 Corylus avellana HOM05D006466 ORTHO05D008084 2.6e-17 93.6 252 34.5
Medtr4g101030 Medicago truncatula HOM05D006466 ORTHO05D008084 7.6e-17 92.0 251 33.1
arahy.Tifrunner.gnm1.ann1.HK6I2L Arachis hypogaea HOM05D006466 ORTHO05D008084 9.9e-17 91.7 265 32.5
Lalb_Chr16g0389331 Lupinus albus HOM05D006466 ORTHO05D008084 9.9e-17 91.7 190 37.9
TPR.G37616 Trifolium pratense HOM05D006466 ORTHO05D008084 9.9e-17 91.7 236 34.7
BcaC06g33488 Brassica carinata HOM05D006466 ORTHO05D008084 1.7e-16 90.9 272 34.6
C07p47980 Brassica napus HOM05D006466 ORTHO05D008084 1.7e-16 90.9 272 34.6
BolC7t45321H Brassica oleracea HOM05D006466 ORTHO05D008084 1.7e-16 90.9 272 34.6
CANSAT21G1921 Cannabis sativa HOM05D006466 ORTHO05D008084 1.7e-16 90.9 262 32.4
arahy.Tifrunner.gnm1.ann1.VT8LY8 Arachis hypogaea HOM05D006466 ORTHO05D008084 2.2e-16 90.5 269 31.2
Peaxi162Scf00002g00172 Petunia axillaris HOM05D006466 ORTHO05D008084 2.9e-16 90.1 279 31.9
GSVIVG01030884001 Vitis vinifera HOM05D006466 ORTHO05D008084 2.9e-16 90.1 248 33.5
A03p49940 Brassica napus HOM05D006466 ORTHO05D008084 6.4e-16 89.0 286 35.0
BraA03t14087Z Brassica rapa HOM05D006466 ORTHO05D008084 6.4e-16 89.0 286 35.0
Atru.chr2.1841 Acer truncatum HOM05D006466 ORTHO05D008084 2.4e-15 87.0 255 33.7
Cpa.g.sc29.144 Carica papaya HOM05D006466 ORTHO05D008084 2.4e-15 87.0 266 32.7
Nn1g01036 Nelumbo nucifera HOM05D006466 ORTHO05D008084 2.4e-15 87.0 248 33.1
Nn6g33981 Nelumbo nucifera HOM05D006466 ORTHO05D008084 7.1e-15 85.5 185 37.3
Ca_21959_v3 Cicer arietinum L. HOM05D006466 ORTHO05D008084 9.3e-15 85.1 209 35.9
AUR62039958 Chenopodium quinoa HOM05D006466 ORTHO05D008084 2.7e-14 83.6 262 30.9
Lj8A452G56 Lonicera japonica HOM05D006466 ORTHO05D008084 1.0e-13 81.6 164 39.6
AUR62007505 Chenopodium quinoa HOM05D006466 ORTHO05D008084 1.3e-13 81.3 223 31.8
Phvul.003G219800 Phaseolus vulgaris HOM05D006466 ORTHO05D008084 1.7e-13 80.9 253 33.2
Os10g0507500 Oryza sativa ssp. japonica HOM05D006466 ORTHO05D008084 2.3e-13 80.5 250 32.0
arahy.Tifrunner.gnm1.ann1.Y2DLV0 Arachis hypogaea HOM05D006466 ORTHO05D008084 6.6e-13 79.0 57 66.7
Zm00001eb044010 Zea mays HOM05D006466 ORTHO05D008084 1.1e-12 78.2 58 67.2
arahy.Tifrunner.gnm1.ann1.MY6G43 Arachis hypogaea HOM05D006466 ORTHO05D008084 1.9e-12 77.4 269 29.4
Eucgr.L01522 Eucalyptus grandis HOM05D006466 ORTHO05D008084 2.1e-11 73.9 51 68.6
Oeu019590.1 Olea europaea HOM05D006466 ORTHO05D008084 2.8e-11 73.6 177 34.5
VMungo0251G3296 Vigna mungo HOM05D006466 ORTHO05D008084 2.8e-11 73.6 253 31.6
Oeu039628.1 Olea europaea HOM05D006466 ORTHO05D008084 4.8e-11 72.8 54 63.0
Glyma.17G140900 Glycine max HOM05D006466 ORTHO05D008084 5.3e-10 69.3 239 31.8
Eucgr.D02058 Eucalyptus grandis HOM05D006466 ORTHO05D008084 5.8e-09 65.9 266 30.8
CDE11G0010 Ceratophyllum demersum HOM05D006466 ORTHO05D008084 6.4e-08 62.4 229 31.9
CBR_g29445 Chara braunii HOM05D006466 ORTHO05D008084 1.6e-06 57.8 64 51.6


User provided reference genes

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