Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0014s0193 Marchantia polymorpha HOM05D003319 ORTHO05D003739 0.0e+00 1183.3 660 100.0
TAR376G1177 Trochodendron aralioides HOM05D003319 ORTHO05D003739 1.9e-42 178.3 670 32.8
ATR0582G130 Amborella trichopoda HOM05D003319 ORTHO05D003739 9.4e-42 176.0 626 30.7
Lj4A737G58 Lonicera japonica HOM05D003319 ORTHO05D003739 3.6e-41 174.1 640 32.3
Dinv42609 Davidia involucrata HOM05D003319 ORTHO05D003739 6.1e-41 173.3 661 31.5
Thecc.08G071400 Theobroma cacao HOM05D003319 ORTHO05D003739 1.4e-40 172.2 266 42.5
CAN.G806.11 Capsicum annuum HOM05D003319 ORTHO05D003739 7.4e-39 166.4 427 35.1
Gohir.D01G114100 Gossypium hirsutum HOM05D003319 ORTHO05D003739 1.7e-38 165.2 341 39.0
Gorai.002G139000 Gossypium raimondii HOM05D003319 ORTHO05D003739 1.7e-38 165.2 341 39.0
CsaV3_2G030210 Cucumis sativus L. HOM05D003319 ORTHO05D003739 2.2e-38 164.9 263 42.6
Gohir.A01G126500 Gossypium hirsutum HOM05D003319 ORTHO05D003739 2.2e-38 164.9 328 39.6
Ciclev10000622m.g Citrus clementina HOM05D003319 ORTHO05D003739 1.1e-37 162.5 377 37.4
Nn1g05581 Nelumbo nucifera HOM05D003319 ORTHO05D003739 1.1e-37 162.5 672 31.4
Sopen00g008100 Solanum pennellii HOM05D003319 ORTHO05D003739 1.1e-37 162.5 266 40.2
TAR628G1108 Trochodendron aralioides HOM05D003319 ORTHO05D003739 1.4e-37 162.2 664 31.6
Nitab4.5_0000354g0150 Nicotiana tabacum HOM05D003319 ORTHO05D003739 3.5e-36 157.5 472 35.0
CSS0018207 Camellia sinensis var. sinensis HOM05D003319 ORTHO05D003739 5.9e-36 156.8 257 40.5
CiPaw.14G112200 Carya illinoinensis HOM05D003319 ORTHO05D003739 5.9e-36 156.8 264 40.2
PGR042G0823 Punica granatum HOM05D003319 ORTHO05D003739 1.0e-35 156.0 444 36.0
Lsat_1_v5_gn_9_74001 Lactuca sativa HOM05D003319 ORTHO05D003739 1.3e-35 155.6 359 35.4
DCAR_012853 Daucus carota HOM05D003319 ORTHO05D003739 5.0e-35 153.7 271 39.9
Sopen12g030000 Solanum pennellii HOM05D003319 ORTHO05D003739 1.1e-34 152.5 442 33.5
Haze_22463 Corylus avellana HOM05D003319 ORTHO05D003739 1.9e-34 151.8 463 33.3
CiPaw.08G055800 Carya illinoinensis HOM05D003319 ORTHO05D003739 2.5e-34 151.4 540 32.2
Duzib093G0230 Durio zibethinus HOM05D003319 ORTHO05D003739 2.5e-34 151.4 331 38.1
Pp3c8_16730 Physcomitrium patens HOM05D003319 ORTHO05D003739 3.2e-34 151.0 583 34.1
CsaV3_3G048000 Cucumis sativus L. HOM05D003319 ORTHO05D003739 7.2e-34 149.8 333 37.8
MBI16_g19592_MAGBIO Magnolia biondii HOM05D003319 ORTHO05D003739 7.2e-34 149.8 658 30.5
THA.LOC104816794 Tarenaya hassleriana HOM05D003319 ORTHO05D003739 7.2e-34 149.8 431 34.1
MD08G1198900 Malus domestica HOM05D003319 ORTHO05D003739 9.4e-34 149.4 273 37.7
Nitab4.5_0001607g0150 Nicotiana tabacum HOM05D003319 ORTHO05D003739 9.4e-34 149.4 427 34.4
GSVIVG01009184001 Vitis vinifera HOM05D003319 ORTHO05D003739 1.2e-33 149.1 668 30.1
FvH4_5g34820 Fragaria vesca HOM05D003319 ORTHO05D003739 1.6e-33 148.7 290 36.2
Solyc12g087970.2 Solanum lycopersicum HOM05D003319 ORTHO05D003739 1.6e-33 148.7 505 31.7
CDE11G0791 Ceratophyllum demersum HOM05D003319 ORTHO05D003739 2.7e-33 147.9 510 32.2
Cfa013800 Carpinus fangiana HOM05D003319 ORTHO05D003739 4.7e-33 147.1 509 32.6
PGSC0003DMG400009342 Solanum tuberosum HOM05D003319 ORTHO05D003739 4.7e-33 147.1 243 39.9
MD15G1386000 Malus domestica HOM05D003319 ORTHO05D003739 6.1e-33 146.7 257 39.3
Manes.18G058300 Manihot esculenta HOM05D003319 ORTHO05D003739 6.1e-33 146.7 415 34.5
Atru.chr13.1006 Acer truncatum HOM05D003319 ORTHO05D003739 8.0e-33 146.4 657 29.5
RcHm_v2.0_Chr7g0235501 Rosa chinensis HOM05D003319 ORTHO05D003739 8.0e-33 146.4 264 38.3
CARHR009680 Cardamine hirsuta HOM05D003319 ORTHO05D003739 1.0e-32 146.0 273 35.9
PSO210G3859 Papaver somniferum HOM05D003319 ORTHO05D003739 1.0e-32 146.0 439 34.6
CiPaw.07G165000 Carya illinoinensis HOM05D003319 ORTHO05D003739 1.4e-32 145.6 457 33.5
MELO3C003521.2 Cucumis melo HOM05D003319 ORTHO05D003739 1.4e-32 145.6 269 40.5
FAN04G1055 Fragaria x ananassa HOM05D003319 ORTHO05D003739 2.3e-32 144.8 289 36.7
Nitab4.5_0005913g0020 Nicotiana tabacum HOM05D003319 ORTHO05D003739 2.3e-32 144.8 421 33.7
ClCG11G014590 Citrullus lanatus HOM05D003319 ORTHO05D003739 4.0e-32 144.1 322 36.0
ECA246G1786 Erigeron canadensis HOM05D003319 ORTHO05D003739 4.0e-32 144.1 265 40.0
Hma1.2p1_0010F.1_g006630 Hydrangea macrophylla HOM05D003319 ORTHO05D003739 4.0e-32 144.1 519 33.3
Aqoxy5G01378 Aquilegia oxysepala HOM05D003319 ORTHO05D003739 5.2e-32 143.7 662 29.6
TWI56G0998 Tripterygium wilfordii HOM05D003319 ORTHO05D003739 5.2e-32 143.7 373 33.0
PSO170G3999 Papaver somniferum HOM05D003319 ORTHO05D003739 6.7e-32 143.3 436 33.9
Lsat_1_v5_gn_6_104940 Lactuca sativa HOM05D003319 ORTHO05D003739 8.8e-32 142.9 259 35.5
FAN13G1335 Fragaria x ananassa HOM05D003319 ORTHO05D003739 1.2e-31 142.5 293 35.8
SEGI_24455 Sequoiadendron giganteum HOM05D003319 ORTHO05D003739 1.2e-31 142.5 560 34.1
Solyc04g076360.4 Solanum lycopersicum HOM05D003319 ORTHO05D003739 1.2e-31 142.5 420 31.9
Rhsim07G0212100 Rhododendron simsii HOM05D003319 ORTHO05D003739 1.5e-31 142.1 604 31.8
CANSAT35G1730 Cannabis sativa HOM05D003319 ORTHO05D003739 3.3e-31 141.0 666 29.3
CDE05G3064 Ceratophyllum demersum HOM05D003319 ORTHO05D003739 3.3e-31 141.0 627 30.6
HanXRQChr05g0163341 Helianthus annuus HOM05D003319 ORTHO05D003739 4.4e-31 140.6 265 37.0
Hund04947 Selenicereus undatus HOM05D003319 ORTHO05D003739 4.4e-31 140.6 500 32.2
QL09p017848 Quercus lobata HOM05D003319 ORTHO05D003739 5.7e-31 140.2 613 28.9
CAN.G475.23 Capsicum annuum HOM05D003319 ORTHO05D003739 9.7e-31 139.4 350 33.7
Peaxi162Scf00160g01038 Petunia axillaris HOM05D003319 ORTHO05D003739 1.3e-30 139.0 433 33.5
Manes.02G144600 Manihot esculenta HOM05D003319 ORTHO05D003739 2.2e-30 138.3 548 31.9
Carub.0001s0905 Capsella rubella HOM05D003319 ORTHO05D003739 2.8e-30 137.9 376 32.7
Actinidia19629 Actinidia chinensis HOM05D003319 ORTHO05D003739 3.7e-30 137.5 264 37.9
Sed0024254 Sechium edule HOM05D003319 ORTHO05D003739 3.7e-30 137.5 373 35.1
ECA232G2539 Erigeron canadensis HOM05D001083 ORTHO05D001637 4.8e-30 137.1 471 32.1
Sabra02G0083800 Salix brachista HOM05D003319 ORTHO05D003739 4.8e-30 137.1 662 29.2
Cpa.g.sc21.26 Carica papaya HOM05D003319 ORTHO05D003739 6.3e-30 136.7 487 32.2
Cc10_g15920 Coffea canephora HOM05D003319 ORTHO05D003739 6.3e-30 136.7 666 29.9
PGR031G0455 Punica granatum HOM05D003319 ORTHO05D003739 1.1e-29 136.0 451 31.7
Haze_23237 Corylus avellana HOM05D003319 ORTHO05D003739 1.4e-29 135.6 426 34.0
Potri.002G106500 Populus trichocarpa HOM05D003319 ORTHO05D003739 1.4e-29 135.6 654 28.4
Sed0025417 Sechium edule HOM05D003319 ORTHO05D003739 1.8e-29 135.2 356 34.6
Cfa009865 Carpinus fangiana HOM05D003319 ORTHO05D003739 3.1e-29 134.4 579 30.7
Glyma.04G095300 Glycine max HOM05D003319 ORTHO05D003739 3.1e-29 134.4 267 38.6
TWI36G0459 Tripterygium wilfordii HOM05D003319 ORTHO05D003739 4.1e-29 134.0 481 31.2
AT1G09710 Arabidopsis thaliana HOM05D003319 ORTHO05D003739 7.0e-29 133.3 542 29.5
Lj1g0027025 Lotus japonicus HOM05D003319 ORTHO05D003739 1.6e-28 132.1 278 36.7
Eucgr.F02154 Eucalyptus grandis HOM05D003319 ORTHO05D003739 2.7e-28 131.3 602 30.1
MELO3C011083.2 Cucumis melo HOM05D003319 ORTHO05D003739 4.5e-28 130.6 571 30.3
vmacro04648 Vaccinium macrocarpon HOM05D003319 ORTHO05D003739 1.0e-27 129.4 651 29.6
HanXRQChr15g0484821 Helianthus annuus HOM05D003319 ORTHO05D003739 2.2e-27 128.3 495 30.3
MSTRG.11807 Avicennia marina HOM05D003319 ORTHO05D003739 2.9e-27 127.9 499 29.3
Lalb_Chr08g0242551 Lupinus albus HOM05D003319 ORTHO05D003739 3.8e-27 127.5 262 37.0
Phvul.009G036300 Phaseolus vulgaris HOM05D003319 ORTHO05D003739 3.8e-27 127.5 264 36.4
PSO478G0452 Papaver somniferum HOM05D003319 ORTHO05D003739 5.0e-27 127.1 452 30.1
Duzib041G0541 Durio zibethinus HOM05D003319 ORTHO05D003739 8.5e-27 126.3 326 33.7
Lalb_Chr11g0064951 Lupinus albus HOM05D003319 ORTHO05D003739 8.5e-27 126.3 266 34.2
COL.COLO4_35252 Corchorus olitorius HOM05D001049 ORTHO05D001986 1.1e-26 125.9 262 39.3
VMungo1309G1101 Vigna mungo HOM05D003319 ORTHO05D003739 1.5e-26 125.6 262 37.4
arahy.Tifrunner.gnm1.ann1.ET429J Arachis hypogaea HOM05D003319 ORTHO05D003739 1.9e-26 125.2 258 35.7
TPR.G6339 Trifolium pratense HOM05D003319 ORTHO05D003739 2.5e-26 124.8 265 36.2
SalBow4G2315 Salvia bowleyana HOM05D003319 ORTHO05D003739 3.2e-26 124.4 458 30.3
Sp2g05390 Schrenkiella parvula HOM05D003319 ORTHO05D003739 5.5e-26 123.6 350 32.0
AUR62019092 Chenopodium quinoa HOM05D003319 ORTHO05D003739 7.2e-26 123.2 507 30.0
Peaxi162Scf00454g00323 Petunia axillaris HOM05D003319 ORTHO05D003739 9.4e-26 122.9 412 33.5
Carub.0002s0638 Capsella rubella HOM05D003319 ORTHO05D003739 1.2e-25 122.5 408 31.6
AT1G58220 Arabidopsis thaliana HOM05D003319 ORTHO05D003739 2.1e-25 121.7 442 31.2
CAN.G193.10 Capsicum annuum HOM05D003319 ORTHO05D003739 2.1e-25 121.7 282 36.5
Dinv44863 Davidia involucrata HOM05D001049 ORTHO05D001986 2.1e-25 121.7 220 41.8
Psat5g049040 Pisum sativum HOM05D003319 ORTHO05D003739 2.1e-25 121.7 302 35.1
QL01p017023 Quercus lobata HOM05D003319 ORTHO05D003739 2.1e-25 121.7 658 29.5
Prupe.1G532700 Prunus persica HOM05D003319 ORTHO05D003739 2.7e-25 121.3 446 32.1
Sc26g0002970 Simmondsia chinensis HOM05D003319 ORTHO05D003739 2.7e-25 121.3 582 28.5
arahy.Tifrunner.gnm1.ann1.53Z6YZ Arachis hypogaea HOM05D003319 ORTHO05D003739 4.7e-25 120.6 386 32.1
HPP92_016140 Vanilla planifolia HOM05D003319 ORTHO05D003739 4.7e-25 120.6 510 29.8
Glyma.02G214600 Glycine max HOM05D003319 ORTHO05D003739 6.1e-25 120.2 258 34.9
A01p28300 Brassica napus HOM05D003319 ORTHO05D003739 8.0e-25 119.8 300 31.0
BraA01t02959Z Brassica rapa HOM05D003319 ORTHO05D003739 8.0e-25 119.8 300 31.0
FAN08G0387 Fragaria x ananassa HOM05D003319 ORTHO05D003739 8.0e-25 119.8 649 29.3
CARHR053790 Cardamine hirsuta HOM05D003319 ORTHO05D003739 1.0e-24 119.4 376 29.3
PSO782G3079 Papaver somniferum HOM05D003319 ORTHO05D003739 1.8e-24 118.6 288 36.5
Phvul.008G182100 Phaseolus vulgaris HOM05D003319 ORTHO05D003739 2.3e-24 118.2 268 36.2
Aqoxy5G01379 Aquilegia oxysepala HOM05D003319 ORTHO05D003739 4.0e-24 117.5 635 28.3
BcaC09g49499 Brassica carinata HOM05D003319 ORTHO05D003739 4.0e-24 117.5 300 31.0
C01p35850 Brassica napus HOM05D003319 ORTHO05D003739 4.0e-24 117.5 300 31.0
BolC1t03546H Brassica oleracea HOM05D003319 ORTHO05D003739 4.0e-24 117.5 300 31.0
BraA09t37477Z Brassica rapa HOM05D003319 ORTHO05D003739 5.2e-24 117.1 375 30.4
Medtr8g024690 Medicago truncatula HOM05D003319 ORTHO05D003739 8.8e-24 116.3 324 32.7
Nitab4.5_0000131g0210 Nicotiana tabacum HOM05D003319 ORTHO05D003739 1.2e-23 115.9 517 30.9
Lalb_Chr23g0270031 Lupinus albus HOM05D003319 ORTHO05D003739 1.5e-23 115.5 319 33.9
AL1G20260 Arabidopsis lyrata HOM05D003319 ORTHO05D003739 2.0e-23 115.2 554 29.1
Migut.F01437 Erythranthe guttata HOM05D003319 ORTHO05D003739 2.0e-23 115.2 380 31.3
Migut.A00432 Erythranthe guttata HOM05D003319 ORTHO05D003739 4.4e-23 114.0 406 29.8
Oeu018565.2 Olea europaea HOM05D003319 ORTHO05D003739 9.8e-23 112.8 542 28.6
Ca_23436_v3 Cicer arietinum L. HOM05D003319 ORTHO05D003739 1.3e-22 112.5 375 31.2
Sp1g08300 Schrenkiella parvula HOM05D003319 ORTHO05D003739 1.7e-22 112.1 596 28.4
EL10Ac1g00993 Beta vulgaris HOM05D003319 ORTHO05D003739 2.2e-22 111.7 503 28.4
ClCG08G011640 Citrullus lanatus HOM05D003319 ORTHO05D003739 2.2e-22 111.7 402 31.6
Thhalv10024079m.g Eutrema salsugineum HOM05D003319 ORTHO05D003739 2.8e-22 111.3 359 30.4
Prupe.1G532600 Prunus persica HOM05D003319 ORTHO05D003739 2.8e-22 111.3 236 37.3
VMungo0647G1715 Vigna mungo HOM05D003319 ORTHO05D003739 3.7e-22 110.9 250 37.2
A09p18510 Brassica napus HOM05D003319 ORTHO05D003739 1.1e-21 109.4 414 30.0
PSO478G3694 Papaver somniferum HOM05D003319 ORTHO05D003739 2.4e-21 108.2 391 33.2
C05p07790 Brassica napus HOM05D003319 ORTHO05D003739 3.1e-21 107.8 565 28.3
C09p23120 Brassica napus HOM05D003319 ORTHO05D003739 2.0e-20 105.1 417 29.3
Ca_29526_v3 Cicer arietinum L. HOM05D003319 ORTHO05D003739 2.0e-20 105.1 377 31.3
Aa31LG1G5280 Aethionema arabicum HOM05D003319 ORTHO05D003739 2.7e-20 104.8 593 28.0
EL10Ac3g06093 Beta vulgaris HOM05D003319 ORTHO05D003739 3.5e-20 104.4 165 38.8
BolC9t55230H Brassica oleracea HOM05D003319 ORTHO05D003739 3.5e-20 104.4 419 29.1
Lj4A717T32 Lonicera japonica HOM05D003319 ORTHO05D003739 4.5e-20 104.0 93 55.9
arahy.Tifrunner.gnm1.ann1.J3DRUP Arachis hypogaea HOM05D003319 ORTHO05D003739 1.3e-19 102.4 443 29.8
BcaB04g20193 Brassica carinata HOM05D003319 ORTHO05D003739 1.7e-19 102.1 350 29.1
SGA_v2.0_scaffold193G40665 Striga asiatica HOM05D003319 ORTHO05D003739 1.7e-19 102.1 427 29.5
Aa31LG2G10920 Aethionema arabicum HOM05D003319 ORTHO05D003739 2.3e-19 101.7 442 28.3
Medtr3g100180 Medicago truncatula HOM05D003319 ORTHO05D003739 2.3e-19 101.7 398 29.9
BcaC04g22121 Brassica carinata HOM05D003319 ORTHO05D003739 5.0e-19 100.5 445 28.1
BolC5t29530H Brassica oleracea HOM05D003319 ORTHO05D003739 5.0e-19 100.5 611 27.8
Psat2g065280 Pisum sativum HOM05D003319 ORTHO05D003739 5.0e-19 100.5 262 33.6
Zm00001eb243450 Zea mays HOM05D003319 ORTHO05D003739 5.0e-19 100.5 443 30.5
BraA06t23850Z Brassica rapa HOM05D003319 ORTHO05D003739 6.6e-19 100.1 627 28.4
FAN18G0012 Fragaria x ananassa HOM05D003319 ORTHO05D003739 8.6e-19 99.8 643 27.5
arahy.Tifrunner.gnm1.ann1.S3SE83 Arachis hypogaea HOM05D003319 ORTHO05D003739 1.1e-18 99.4 435 31.0
Ah.07g202760 Amaranthus hybridus HOM05D003319 ORTHO05D003739 4.2e-18 97.4 109 47.7
PSO478G0048 Papaver somniferum HOM05D003319 ORTHO05D003739 1.6e-17 95.5 500 29.2
PSO782G3353 Papaver somniferum HOM05D003319 ORTHO05D003739 2.1e-17 95.1 328 29.3
A06p06390 Brassica napus HOM05D003319 ORTHO05D003739 8.0e-17 93.2 620 28.2
Os02g0551400 Oryza sativa ssp. japonica HOM05D003319 ORTHO05D003739 1.0e-16 92.8 454 30.2
PSO478G2921 Papaver somniferum HOM05D003319 ORTHO05D003739 1.4e-16 92.4 636 28.3
CBR_g9137 Chara braunii HOM05D000023 ORTHO05D000002 2.3e-16 91.7 159 37.1
Sabra05G0119500 Salix brachista HOM05D003319 ORTHO05D003739 6.8e-16 90.1 683 28.6
Zm00001eb181960 Zea mays HOM05D003319 ORTHO05D003739 6.8e-16 90.1 399 28.1
AUR62023790 Chenopodium quinoa HOM05D003319 ORTHO05D003739 8.9e-16 89.7 445 31.7
PSO478G0631 Papaver somniferum HOM05D003319 ORTHO05D003739 2.0e-15 88.6 113 42.5
SHI20381 Sapria himalayana HOM05D003319 ORTHO05D003739 7.5e-15 86.7 127 40.9
unitig_32.g10947 Utricularia gibba HOM05D003319 ORTHO05D003739 7.5e-15 86.7 523 26.6
Sed0014936 Sechium edule HOM05D003319 ORTHO05D003739 7.0e-13 80.1 89 48.3
LjContig00408g0021434 Lotus japonicus HOM05D003319 ORTHO05D003739 2.0e-12 78.6 113 39.8
AUR62002401 Chenopodium quinoa HOM05D003319 ORTHO05D003739 2.3e-11 75.1 448 29.7
arahy.Tifrunner.gnm1.ann1.TQJ3R9 Arachis hypogaea HOM05D003319 ORTHO05D003739 2.5e-10 71.6 80 43.8
FAN12G3643 Fragaria x ananassa HOM05D003319 ORTHO05D003739 3.3e-10 71.2 72 45.8
FAN12G3747 Fragaria x ananassa HOM05D003319 ORTHO05D003739 4.3e-10 70.9 72 45.8
AL2G18190 Arabidopsis lyrata HOM05D003319 ORTHO05D003739 9.5e-10 69.7 371 27.5
Hund17284 Selenicereus undatus HOM05D003319 ORTHO05D003739 9.5e-10 69.7 250 31.6
DCAR_019315 Daucus carota HOM05D003319 ORTHO05D003739 1.2e-09 69.3 677 26.7
arahy.Tifrunner.gnm1.ann1.UL2XNL Arachis hypogaea HOM05D003319 ORTHO05D003739 1.6e-09 68.9 59 50.8
CBR_g9135 Chara braunii HOM05D003319 ORTHO05D003739 2.1e-09 68.6 736 26.8
Hma1.2p1_0616F.1_g189970 Hydrangea macrophylla HOM05D003319 ORTHO05D003739 4.0e-08 64.3 178 37.6
Lj4A88T36 Lonicera japonica HOM05D003319 ORTHO05D003739 2.6e-07 61.6 186 33.9
SHI20380 Sapria himalayana HOM05D003319 ORTHO05D003739 9.8e-07 59.7 46 60.9
Psat6g236040 Pisum sativum HOM05D003319 ORTHO05D003739 6.4e-06 57.0 88 37.5
Sc15g0002710 Simmondsia chinensis HOM05D003319 ORTHO05D003739 6.4e-06 57.0 61 42.6


User provided reference genes

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