Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0014s0172 Marchantia polymorpha HOM05D029953 ORTHO05D009567 2.5e-276 954.9 500 100.0
Pp3c14_2620 Physcomitrium patens HOM05D029953 ORTHO05D009567 6.4e-22 109.8 242 37.6
AagrBONN_evm.TU.Sc2ySwM_368.250 Anthoceros agrestis HOM05D029953 ORTHO05D009567 3.3e-18 97.4 258 34.1
Pp3c1_25250 Physcomitrium patens HOM05D029953 ORTHO05D005170 5.6e-18 96.7 274 33.2
SEGI_11810 Sequoiadendron giganteum HOM05D003589 ORTHO05D005170 2.1e-17 94.7 210 37.6
Dinv38838 Davidia involucrata HOM05D007666 ORTHO05D009567 4.2e-13 80.5 274 29.6
Gohir.A02G003200 Gossypium hirsutum HOM05D003589 ORTHO05D005170 4.2e-13 80.5 270 30.4
Gohir.D02G003600 Gossypium hirsutum HOM05D003589 ORTHO05D005170 1.6e-12 78.6 270 29.6
MSTRG.25667 Avicennia marina HOM05D007666 ORTHO05D009567 2.7e-12 77.8 280 28.2
Potri.003G139400 Populus trichocarpa HOM05D007666 ORTHO05D009567 3.9e-11 73.9 255 29.4
QL02p030815 Quercus lobata HOM05D007666 ORTHO05D009567 8.7e-11 72.8 244 29.9
PSO384G2287 Papaver somniferum HOM05D007666 ORTHO05D009567 1.5e-10 72.0 279 28.3
GSVIVG01019521001 Vitis vinifera HOM05D007666 ORTHO05D009567 1.9e-10 71.6 231 29.0
Sed0007649 Sechium edule HOM05D007666 ORTHO05D009567 3.3e-10 70.9 237 27.8
CSS0011760 Camellia sinensis var. sinensis HOM05D007666 ORTHO05D009567 4.3e-10 70.5 299 26.4
CiPaw.12G083800 Carya illinoinensis HOM05D007666 ORTHO05D009567 4.3e-10 70.5 283 27.9
PSO135G0060 Papaver somniferum HOM05D007666 ORTHO05D009567 4.3e-10 70.5 279 29.4
Ciclev10011425m.g Citrus clementina HOM05D003589 ORTHO05D005170 5.6e-10 70.1 231 29.4
Thecc.03G296800 Theobroma cacao HOM05D007666 ORTHO05D009567 5.6e-10 70.1 265 26.4
Atru.chr9.2008 Acer truncatum HOM05D007666 ORTHO05D009567 7.3e-10 69.7 290 26.9
Nitab4.5_0005537g0030 Nicotiana tabacum HOM05D007666 ORTHO05D009567 1.3e-09 68.9 246 25.6
Gohir.D03G082600 Gossypium hirsutum HOM05D007666 ORTHO05D009567 2.1e-09 68.2 272 26.8
Gorai.003G080900 Gossypium raimondii HOM05D007666 ORTHO05D009567 2.8e-09 67.8 272 26.8
HPP92_005518 Vanilla planifolia HOM05D007666 ORTHO05D009567 4.8e-09 67.0 222 27.5
Manes.01G049375 Manihot esculenta HOM05D007666 ORTHO05D009567 6.2e-09 66.6 269 27.9
Nitab4.5_0001231g0060 Nicotiana tabacum HOM05D007666 ORTHO05D009567 6.2e-09 66.6 246 25.2
ClCG07G014990 Citrullus lanatus HOM05D007666 ORTHO05D009567 8.1e-09 66.2 276 26.8
COL.COLO4_06483 Corchorus olitorius HOM05D003589 ORTHO05D005170 2.4e-08 64.7 216 32.4
SMO239G0125 Selaginella moellendorffii HOM05D007666 ORTHO05D009567 4.0e-08 63.9 227 29.5
Thhalv10023582m.g Eutrema salsugineum HOM05D007666 ORTHO05D009567 5.3e-08 63.5 292 27.1
CsaV3_4G006520 Cucumis sativus L. HOM05D007666 ORTHO05D009567 6.9e-08 63.2 240 26.7
MELO3C016286.2 Cucumis melo HOM05D007666 ORTHO05D009567 9.0e-08 62.8 247 25.5
Duzib068G1371 Durio zibethinus HOM05D007666 ORTHO05D009567 1.5e-07 62.0 275 27.6
Cfa017032 Carpinus fangiana HOM05D003589 ORTHO05D005170 3.4e-07 60.8 284 27.1
Actinidia20793 Actinidia chinensis HOM05D003589 ORTHO05D005170 5.8e-07 60.1 232 30.6
Migut.A00661 Erythranthe guttata HOM05D007666 ORTHO05D009567 5.8e-07 60.1 236 24.2
Gohir.A02G101700 Gossypium hirsutum HOM05D007666 ORTHO05D009567 5.8e-07 60.1 278 26.6
SGA_v2.0_scaffold85G26610 Striga asiatica HOM05D003589 ORTHO05D005170 1.3e-06 58.9 259 26.6
Gorai.005G004100 Gossypium raimondii HOM05D003589 ORTHO05D005170 1.7e-06 58.5 373 26.3
Hma1.2p1_0229F.1_g097150 Hydrangea macrophylla HOM05D007666 ORTHO05D009567 1.7e-06 58.5 237 27.0
MD06G1105600 Malus domestica HOM05D007666 ORTHO05D009567 6.4e-06 56.6 275 26.5


User provided reference genes

Program Settings