Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 3.7e-230 801.2 413 100.0
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 7.0e-229 797.0 409 100.0
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 5.2e-107 392.1 347 56.2
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 7.5e-106 388.3 345 57.4
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 2.1e-103 380.2 366 53.3
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 7.6e-98 361.7 354 53.4
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 1.9e-93 347.1 353 54.1
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 8.1e-92 341.7 356 50.6
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 1.4e-91 340.9 349 53.0
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 8.4e-89 331.6 345 51.6
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 3.2e-88 329.7 345 51.6
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 5.4e-88 328.9 345 50.7
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 4.6e-87 325.9 345 50.1
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 7.3e-85 318.5 387 47.3
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 7.3e-85 318.5 388 45.6
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 1.3e-84 317.8 346 49.1
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 1.6e-84 317.4 346 48.0
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 6.2e-84 315.5 416 43.8
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 4.0e-83 312.8 347 47.6
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 4.0e-83 312.8 352 47.7
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 9.0e-83 311.6 358 47.5
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 9.9e-82 308.1 355 47.6
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 9.9e-82 308.1 359 46.8
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 6.4e-81 305.4 346 48.0
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 8.4e-81 305.1 377 45.1
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 8.4e-81 305.1 358 47.2
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.4e-80 304.3 356 47.2
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 1.9e-80 303.9 379 44.1
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 1.9e-80 303.9 384 46.1
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.9e-80 303.9 345 47.2
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 3.2e-80 303.1 352 46.0
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 3.2e-80 303.1 358 48.0
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 5.4e-80 302.4 383 44.6
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 5.4e-80 302.4 383 45.4
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 5.4e-80 302.4 360 46.1
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 7.1e-80 302.0 356 46.6
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 9.3e-80 301.6 357 47.6
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 4.6e-79 299.3 354 46.9
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 6.0e-79 298.9 395 44.6
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 7.9e-79 298.5 359 45.7
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 7.9e-79 298.5 353 46.7
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 1.3e-78 297.7 368 45.7
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 1.3e-78 297.7 383 45.2
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 1.7e-78 297.4 380 46.1
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.7e-78 297.4 382 45.0
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 1.7e-78 297.4 350 46.6
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 2.3e-78 297.0 346 47.4
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 2.3e-78 297.0 382 44.8
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 3.0e-78 296.6 353 44.8
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 3.0e-78 296.6 383 45.4
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 3.0e-78 296.6 382 44.5
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 3.0e-78 296.6 347 48.1
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 3.9e-78 296.2 352 44.9
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.1e-77 294.7 382 44.8
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 1.5e-77 294.3 383 44.4
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 1.5e-77 294.3 356 44.9
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 1.9e-77 293.9 346 46.5
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 2.5e-77 293.5 355 47.0
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 3.3e-77 293.1 387 42.9
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 4.3e-77 292.7 379 45.1
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 2.4e-75 287.0 381 42.3
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 2.4e-75 287.0 343 47.2
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 1.5e-74 284.3 386 43.8
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 4.5e-74 282.7 369 43.6
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 4.5e-74 282.7 361 44.6
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 3.8e-73 279.6 383 42.0
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 6.4e-73 278.9 386 43.3
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 3.0e-70 270.0 335 43.0
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 6.2e-68 262.3 353 41.9
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 3.1e-67 260.0 349 43.0
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 1.2e-66 258.1 353 42.2
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 2.2e-65 253.8 315 44.8
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 2.9e-65 253.4 362 41.2
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 3.8e-65 253.1 359 41.2
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 6.5e-65 252.3 362 40.9
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 1.9e-64 250.8 353 41.6
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 1.9e-64 250.8 353 41.6
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 3.2e-64 250.0 365 40.0
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 4.2e-64 249.6 358 40.8
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 5.5e-64 249.2 556 32.2
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 5.5e-64 249.2 362 39.2
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 7.1e-64 248.8 351 41.6
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 6.0e-63 245.7 360 40.3
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 1.0e-62 245.0 378 38.9
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 2.3e-62 243.8 358 39.1
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 1.1e-61 241.5 358 43.9
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 1.9e-61 240.7 343 41.7
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 9.6e-61 238.4 309 43.7
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 1.6e-60 237.7 380 36.6
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 5.3e-59 232.6 315 42.5
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 2.3e-54 217.2 301 41.5
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 2.6e-50 203.8 300 41.3
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 8.5e-49 198.7 229 46.3
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 3.6e-47 193.4 320 40.0
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 1.7e-33 147.9 196 41.8
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 5.9e-26 122.9 256 34.8
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 6.5e-25 119.4 368 26.6
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 4.4e-21 106.7 116 50.0
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 2.9e-17 94.0 139 41.0
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 5.5e-16 89.7 77 64.9
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 7.2e-16 89.4 141 36.2
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 1.7e-12 78.2 144 38.2
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 1.7e-09 68.2 107 38.3
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 1.1e-08 65.5 89 44.9


User provided reference genes

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