Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 1.8e-148 530.0 464 100.0
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 3.1e-76 290.0 411 68.9
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 3.1e-76 290.0 411 68.9
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 5.2e-63 246.1 410 65.4
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 1.3e-61 241.5 163 73.6
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 3.5e-59 233.4 165 72.7
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 3.5e-59 233.4 165 72.7
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 4.6e-59 233.0 165 72.1
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 7.8e-59 232.3 165 72.7
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 1.0e-58 231.9 165 72.1
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 1.3e-58 231.5 165 71.5
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 2.3e-58 230.7 165 69.7
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 3.0e-58 230.3 165 70.3
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 3.0e-58 230.3 165 71.5
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 3.9e-58 229.9 165 71.5
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 6.6e-58 229.2 165 71.5
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 1.9e-57 227.6 163 71.2
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 1.9e-57 227.6 165 71.5
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 2.5e-57 227.3 165 70.9
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 3.3e-57 226.9 165 70.3
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 4.3e-57 226.5 163 71.2
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 4.3e-57 226.5 165 68.5
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 5.6e-57 226.1 164 70.7
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 5.6e-57 226.1 163 71.8
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 7.3e-57 225.7 165 70.9
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 7.3e-57 225.7 164 70.7
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 7.3e-57 225.7 271 66.1
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 7.3e-57 225.7 165 70.9
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 7.3e-57 225.7 165 70.3
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 9.5e-57 225.3 162 70.4
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 9.5e-57 225.3 164 70.7
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 9.5e-57 225.3 165 69.1
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 1.6e-56 224.6 165 69.7
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 2.8e-56 223.8 165 70.3
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 2.8e-56 223.8 161 71.4
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 3.6e-56 223.4 161 72.0
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 3.6e-56 223.4 164 69.5
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 3.6e-56 223.4 163 69.9
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 3.6e-56 223.4 165 68.5
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 3.6e-56 223.4 165 68.5
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 6.2e-56 222.6 165 68.5
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 6.2e-56 222.6 164 68.9
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 6.2e-56 222.6 165 67.3
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 6.2e-56 222.6 165 67.9
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 8.0e-56 222.2 161 70.2
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.0e-55 221.9 160 71.9
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 1.0e-55 221.9 165 67.9
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 1.4e-55 221.5 162 68.5
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 1.4e-55 221.5 166 70.5
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 1.8e-55 221.1 165 66.1
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 1.8e-55 221.1 164 68.3
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 3.1e-55 220.3 164 70.1
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 3.1e-55 220.3 165 68.5
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 4.0e-55 219.9 162 69.1
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 4.0e-55 219.9 166 69.9
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 5.2e-55 219.5 159 69.8
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 5.2e-55 219.5 159 69.8
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 5.2e-55 219.5 164 68.3
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 5.2e-55 219.5 165 66.7
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 5.2e-55 219.5 159 70.4
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 5.2e-55 219.5 165 67.3
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 5.2e-55 219.5 165 67.3
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 8.9e-55 218.8 162 69.1
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 1.2e-54 218.4 160 70.0
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 1.2e-54 218.4 160 70.0
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.2e-54 218.4 418 50.5
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 1.5e-54 218.0 161 69.6
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 2.0e-54 217.6 160 68.8
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 2.0e-54 217.6 156 71.2
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 2.0e-54 217.6 159 70.4
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 2.0e-54 217.6 165 66.7
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 2.0e-54 217.6 159 70.4
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 2.6e-54 217.2 159 69.8
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 2.6e-54 217.2 165 66.7
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 3.4e-54 216.9 159 70.4
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 5.8e-54 216.1 161 68.3
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 7.5e-54 215.7 159 69.2
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 9.8e-54 215.3 153 72.5
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 9.8e-54 215.3 165 67.3
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 1.3e-53 214.9 165 65.5
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 1.7e-53 214.5 165 64.8
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 1.7e-53 214.5 160 66.9
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 1.7e-53 214.5 155 70.3
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 2.2e-53 214.2 160 67.5
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 4.9e-53 213.0 161 67.7
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.9e-52 211.1 159 66.0
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 1.9e-52 211.1 153 71.9
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 3.2e-52 210.3 165 66.1
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 3.2e-52 210.3 165 66.1
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 3.2e-52 210.3 165 66.1
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 3.2e-52 210.3 165 66.1
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 3.2e-52 210.3 160 66.2
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 5.4e-52 209.5 165 66.1
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 9.2e-52 208.8 162 67.3
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 1.6e-51 208.0 165 65.5
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 2.0e-51 207.6 164 65.2
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 2.7e-51 207.2 159 66.7
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 3.5e-51 206.8 156 66.7
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 3.5e-51 206.8 161 65.8
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 3.5e-51 206.8 415 48.4
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 3.5e-51 206.8 160 66.9
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 7.8e-51 205.7 147 72.1
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 3.0e-50 203.8 167 64.1
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 1.6e-48 198.0 167 62.3
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.8e-47 194.5 167 61.1
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 1.1e-41 175.3 155 60.0
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 2.9e-37 160.6 114 71.1
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 3.6e-32 143.7 152 56.6
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 5.4e-28 129.8 164 45.7
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 2.1e-24 117.9 166 42.2
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 4.9e-21 106.7 159 43.4
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 1.6e-19 101.7 165 38.2
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 1.6e-16 91.7 138 39.9
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 1.4e-12 78.6 62 62.9
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 3.0e-10 70.9 95 46.3
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 7.4e-09 66.2 118 35.6
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 2.1e-08 64.7 81 46.9
TWI36G1055 Tripterygium wilfordii HOM05D005498 ORTHO05D006719 1.2e-06 58.9 117 33.3
TWI75G0967 Tripterygium wilfordii HOM05D005498 ORTHO05D006719 2.0e-06 58.2 117 32.5
TWI75G1441 Tripterygium wilfordii HOM05D005498 ORTHO05D006719 2.0e-06 58.2 117 32.5
PGR119G1930 Punica granatum HOM05D005498 ORTHO05D006719 4.5e-06 57.0 118 31.4
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 7.6e-06 56.2 118 33.9
Thhalv10008494m.g Eutrema salsugineum HOM05D005498 ORTHO05D006719 7.6e-06 56.2 117 32.5


User provided reference genes

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