Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0013s0135 Marchantia polymorpha HOM05D002537 ORTHO05D002751 3.9e-166 588.2 322 100.0
AagrBONN_evm.TU.Sc2ySwM_344.5537 Anthoceros agrestis HOM05D002537 ORTHO05D002751 4.0e-22 109.8 323 27.9
Mapoly0142s0034 Marchantia polymorpha HOM05D002537 ORTHO05D002751 3.4e-13 80.1 146 33.6
AagrBONN_evm.TU.Sc2ySwM_344.4466 Anthoceros agrestis HOM05D002537 ORTHO05D002751 3.2e-11 73.6 109 39.4
Mapoly0011s0057 Marchantia polymorpha HOM05D029505 ORTHO05D006869 1.6e-10 71.2 251 27.9
Pp3c26_2600 Physcomitrium patens HOM05D002537 ORTHO05D002751 7.9e-10 68.9 141 31.2
Pp3c26_2630 Physcomitrium patens HOM05D002537 ORTHO05D002751 7.9e-10 68.9 141 31.2
Mapoly0086s0081 Marchantia polymorpha HOM05D003725 ORTHO05D004294 5.1e-09 66.2 123 33.3
Pp3c21_18170 Physcomitrium patens HOM05D003725 ORTHO05D004294 8.7e-09 65.5 249 25.7
CAN.G843.13 Capsicum annuum HOM05D002537 ORTHO05D002751 1.1e-08 65.1 130 34.6
HanXRQChr05g0155411 Helianthus annuus HOM05D002537 ORTHO05D002751 1.5e-08 64.7 203 26.1
Solyc03g118230.3 Solanum lycopersicum HOM05D002537 ORTHO05D002751 1.9e-08 64.3 130 33.8
Pp3c22_15410 Physcomitrium patens HOM05D003725 ORTHO05D004294 2.5e-08 63.9 249 23.7
Sopen03g037140 Solanum pennellii HOM05D002537 ORTHO05D002751 2.5e-08 63.9 130 33.8
SMO115G0244 Selaginella moellendorffii HOM05D002537 ORTHO05D002751 3.3e-08 63.5 127 37.0
CBR_g31914 Chara braunii HOM05D002772 ORTHO05D003171 4.3e-08 63.2 156 32.1
Pp3c4_22830 Physcomitrium patens HOM05D002537 ORTHO05D002751 4.3e-08 63.2 255 24.7
Pp3c4_22880 Physcomitrium patens HOM05D002537 ORTHO05D002751 4.3e-08 63.2 255 24.7
Nitab4.5_0000976g0050 Nicotiana tabacum HOM05D002537 ORTHO05D002751 5.7e-08 62.8 142 30.3
PGSC0003DMG400014176 Solanum tuberosum HOM05D002537 ORTHO05D002751 5.7e-08 62.8 140 30.0
Duzib160G0754 Durio zibethinus HOM05D003725 ORTHO05D004294 7.4e-08 62.4 149 30.9
Gorai.010G171500 Gossypium raimondii HOM05D003725 ORTHO05D004294 7.4e-08 62.4 151 29.1
Thecc.06G136700 Theobroma cacao HOM05D003725 ORTHO05D004294 9.6e-08 62.0 153 28.8
Gohir.A06G140400 Gossypium hirsutum HOM05D003725 ORTHO05D004294 1.3e-07 61.6 143 30.1
SEGI_31691 Sequoiadendron giganteum HOM05D002537 ORTHO05D004294 1.3e-07 61.6 115 33.0
Gohir.D06G147100 Gossypium hirsutum HOM05D003725 ORTHO05D004294 1.6e-07 61.2 148 29.1
Haze_06001 Corylus avellana HOM05D003725 ORTHO05D004294 2.8e-07 60.5 170 28.8
Duzib192G0627 Durio zibethinus HOM05D003725 ORTHO05D004294 2.8e-07 60.5 133 31.6
Mapoly0001s0020 Marchantia polymorpha HOM05D002537 ORTHO05D002751 3.7e-07 60.1 124 33.1
Nitab4.5_0010249g0020 Nicotiana tabacum HOM05D002537 ORTHO05D002751 3.7e-07 60.1 123 30.9
COL.COLO4_30941 Corchorus olitorius HOM05D003725 ORTHO05D004294 4.8e-07 59.7 183 30.1
Mapoly0001s0312 Marchantia polymorpha HOM05D029505 ORTHO05D006869 4.8e-07 59.7 120 30.8
Pp3c19_13320 Physcomitrium patens HOM05D003725 ORTHO05D004294 6.3e-07 59.3 249 24.1
SMO351G0173 Selaginella moellendorffii HOM05D002537 ORTHO05D002751 6.3e-07 59.3 143 28.7
SMO367G0451 Selaginella moellendorffii HOM05D003725 ORTHO05D004294 6.3e-07 59.3 146 27.4
Zm00001eb217780 Zea mays HOM05D003725 ORTHO05D004294 6.3e-07 59.3 125 30.4
Cfa000740 Carpinus fangiana HOM05D003725 ORTHO05D004294 8.2e-07 58.9 170 28.2
CBR_g38396 Chara braunii HOM05D002537 ORTHO05D002751 8.2e-07 58.9 123 30.1
ATR0807G251 Amborella trichopoda HOM05D003725 ORTHO05D004294 1.1e-06 58.5 146 27.4
DCAR_021402 Daucus carota HOM05D002537 ORTHO05D002751 1.1e-06 58.5 122 31.1
Thhalv10016925m.g Eutrema salsugineum HOM05D003725 ORTHO05D004294 1.1e-06 58.5 135 30.4
HanXRQChr16g0529331 Helianthus annuus HOM05D002537 ORTHO05D002751 1.1e-06 58.5 151 29.8
Mapoly0056s0059 Marchantia polymorpha HOM05D002537 ORTHO05D002751 1.1e-06 58.5 122 28.7
Dinv13726 Davidia involucrata HOM05D002537 ORTHO05D002751 1.4e-06 58.2 123 31.7
AagrBONN_evm.TU.Sc2ySwM_117.2665 Anthoceros agrestis HOM05D003725 ORTHO05D004294 1.8e-06 57.8 154 26.0
AagrBONN_evm.TU.Sc2ySwM_228.3719 Anthoceros agrestis HOM05D003725 ORTHO05D004294 1.8e-06 57.8 218 26.6
TAR396G0001 Trochodendron aralioides HOM05D003725 ORTHO05D004294 1.8e-06 57.8 218 23.9
CBR_g48231 Chara braunii HOM05D002772 ORTHO05D003171 2.4e-06 57.4 133 30.8
ECA246G2368 Erigeron canadensis HOM05D002537 ORTHO05D002751 2.4e-06 57.4 123 31.7
Gohir.D10G047300 Gossypium hirsutum HOM05D003725 ORTHO05D004294 2.4e-06 57.4 148 29.7
Manes.06G126500 Manihot esculenta HOM05D002537 ORTHO05D002751 2.4e-06 57.4 124 32.3
CBR_g55236 Chara braunii HOM05D008439 ORTHO05D003171 5.3e-06 56.2 100 33.0
Lsat_1_v5_gn_5_10240 Lactuca sativa HOM05D002537 ORTHO05D002751 5.3e-06 56.2 123 30.9
SEGI_04955 Sequoiadendron giganteum HOM05D002537 ORTHO05D002751 5.3e-06 56.2 279 23.3
Sopen02g018540 Solanum pennellii HOM05D003725 ORTHO05D004294 5.3e-06 56.2 142 30.3
CBR_g66774 Chara braunii HOM05D002772 ORTHO05D003171 6.9e-06 55.8 144 31.2
CBR_g8120 Chara braunii HOM05D002772 ORTHO05D003171 6.9e-06 55.8 217 26.3
Gohir.A10G046100 Gossypium hirsutum HOM05D003725 ORTHO05D004294 6.9e-06 55.8 164 28.0
MBI16_g00837_MAGBIO Magnolia biondii HOM05D006943 ORTHO05D008565 6.9e-06 55.8 114 31.6
Peaxi162Scf00314g00642 Petunia axillaris HOM05D002537 ORTHO05D002751 6.9e-06 55.8 137 31.4
CBR_g12828 Chara braunii HOM05D002772 ORTHO05D003171 9.0e-06 55.5 115 31.3
CBR_g51118 Chara braunii HOM05D002772 ORTHO05D003171 9.0e-06 55.5 137 27.7
Gorai.011G050400 Gossypium raimondii HOM05D003725 ORTHO05D004294 9.0e-06 55.5 148 29.1
SEGI_35765 Sequoiadendron giganteum HOM05D002537 ORTHO05D002751 9.0e-06 55.5 260 24.2


User provided reference genes

Program Settings