Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0013s0055 Marchantia polymorpha HOM05D006721 ORTHO05D000476 2.5e-90 335.5 181 100.0
Pp3c7_11510 Physcomitrium patens HOM05D006721 ORTHO05D000476 1.2e-26 124.0 121 57.9
ATR0665G282 Amborella trichopoda HOM05D006721 ORTHO05D000476 2.4e-24 116.3 86 62.8
CDE06G1546 Ceratophyllum demersum HOM05D006721 ORTHO05D000476 4.1e-24 115.5 87 63.2
Peaxi162Scf00135g00914 Petunia axillaris HOM05D006721 ORTHO05D000476 1.2e-23 114.0 87 62.1
HPP92_000759 Vanilla planifolia HOM05D006721 ORTHO05D000476 1.2e-23 114.0 87 60.9
Dinv14631 Davidia involucrata HOM05D006721 ORTHO05D000476 1.6e-23 113.6 86 62.8
THA.LOC104808031 Tarenaya hassleriana HOM05D006721 ORTHO05D000476 2.7e-23 112.8 84 59.5
GSVIVG01036217001 Vitis vinifera HOM05D006721 ORTHO05D000476 3.5e-23 112.5 108 52.8
Actinidia38949 Actinidia chinensis HOM05D006721 ORTHO05D000476 4.6e-23 112.1 87 62.1
Nitab4.5_0000930g0080 Nicotiana tabacum HOM05D006721 ORTHO05D000476 4.6e-23 112.1 83 63.9
Nn1g02669 Nelumbo nucifera HOM05D006721 ORTHO05D000476 7.8e-23 111.3 87 62.1
MSTRG.9005 Avicennia marina HOM05D006721 ORTHO05D000476 1.0e-22 110.9 108 53.7
EL10Ac4g09049 Beta vulgaris HOM05D006721 ORTHO05D000476 1.0e-22 110.9 87 59.8
Migut.F00814 Erythranthe guttata HOM05D006721 ORTHO05D000476 1.0e-22 110.9 105 53.3
Os07g0185800 Oryza sativa ssp. japonica HOM05D006721 ORTHO05D000476 1.0e-22 110.9 87 60.9
vmacro10349 Vaccinium macrocarpon HOM05D006721 ORTHO05D000476 1.0e-22 110.9 87 60.9
Zm00001eb301780 Zea mays HOM05D006721 ORTHO05D000476 1.0e-22 110.9 87 60.9
Cc02_g09090 Coffea canephora HOM05D006721 ORTHO05D000476 1.3e-22 110.5 84 63.1
Haze_04466 Corylus avellana HOM05D006721 ORTHO05D000476 1.3e-22 110.5 83 61.4
PGR142G1199 Punica granatum HOM05D006721 ORTHO05D000476 1.3e-22 110.5 105 52.4
QL01p041965 Quercus lobata HOM05D006721 ORTHO05D000476 1.3e-22 110.5 84 60.7
QL03p032184 Quercus lobata HOM05D006721 ORTHO05D000476 1.3e-22 110.5 84 60.7
QL03p032281 Quercus lobata HOM05D006721 ORTHO05D000476 1.3e-22 110.5 84 60.7
Hund06940 Selenicereus undatus HOM05D006721 ORTHO05D000476 1.3e-22 110.5 86 61.6
Atru.chr2.886 Acer truncatum HOM05D006721 ORTHO05D000476 1.7e-22 110.2 84 60.7
Dinv18276 Davidia involucrata HOM05D006721 ORTHO05D000476 2.3e-22 109.8 86 61.6
Eucgr.B02129 Eucalyptus grandis HOM05D006721 ORTHO05D000476 2.3e-22 109.8 105 52.4
Aqoxy2G03596 Aquilegia oxysepala HOM05D006721 ORTHO05D000476 3.9e-22 109.0 87 59.8
CiPaw.07G077700 Carya illinoinensis HOM05D006721 ORTHO05D000476 3.9e-22 109.0 84 59.5
Ah.04g163750 Amaranthus hybridus HOM05D006721 ORTHO05D000476 5.1e-22 108.6 83 62.7
Thecc.05G276800 Theobroma cacao HOM05D006721 ORTHO05D000476 5.1e-22 108.6 84 60.7
TAR365G0041 Trochodendron aralioides HOM05D006721 ORTHO05D000476 5.1e-22 108.6 87 59.8
Cfa006323 Carpinus fangiana HOM05D006721 ORTHO05D000476 6.6e-22 108.2 85 60.0
AUR62004887 Chenopodium quinoa HOM05D006721 ORTHO05D000476 6.6e-22 108.2 86 59.3
COL.COLO4_15417 Corchorus olitorius HOM05D006721 ORTHO05D000476 6.6e-22 108.2 84 61.9
CsaV3_2G003760 Cucumis sativus L. HOM05D006721 ORTHO05D000476 6.6e-22 108.2 84 58.3
HanXRQChr11g0322821 Helianthus annuus HOM05D006721 ORTHO05D000476 6.6e-22 108.2 87 58.6
AUR62001066 Chenopodium quinoa HOM05D006721 ORTHO05D000476 1.1e-21 107.5 86 59.3
Oeu058331.1 Olea europaea HOM05D006721 ORTHO05D000476 1.1e-21 107.5 86 55.8
Potri.019G014100 Populus trichocarpa HOM05D006721 ORTHO05D000476 1.1e-21 107.5 84 60.7
Sopen04g004980 Solanum pennellii HOM05D006721 ORTHO05D000476 1.1e-21 107.5 87 58.6
PGSC0003DMG400025428 Solanum tuberosum HOM05D006721 ORTHO05D000476 1.1e-21 107.5 87 58.6
ECA238G3797 Erigeron canadensis HOM05D006721 ORTHO05D000476 1.5e-21 107.1 87 58.6
Sed0018278 Sechium edule HOM05D006721 ORTHO05D000476 1.5e-21 107.1 84 58.3
SMO367G0192 Selaginella moellendorffii HOM05D001348 ORTHO05D002788 1.5e-21 107.1 109 54.1
MBI19_g37090_MAGBIO Magnolia biondii HOM05D006721 ORTHO05D000476 1.9e-21 106.7 87 58.6
Prupe.6G347400 Prunus persica HOM05D006721 ORTHO05D000476 1.9e-21 106.7 84 60.7
Aa31LG8G12480 Aethionema arabicum HOM05D006721 ORTHO05D000476 2.5e-21 106.3 84 58.3
Carub.0003s2825 Capsella rubella HOM05D006721 ORTHO05D000476 2.5e-21 106.3 84 58.3
Ciclev10022930m.g Citrus clementina HOM05D006721 ORTHO05D000476 2.5e-21 106.3 84 59.5
Gohir.A13G168900 Gossypium hirsutum HOM05D006721 ORTHO05D000476 2.5e-21 106.3 84 57.1
Gohir.D13G174300 Gossypium hirsutum HOM05D006721 ORTHO05D000476 2.5e-21 106.3 84 57.1
Gorai.013G186500 Gossypium raimondii HOM05D006721 ORTHO05D000476 2.5e-21 106.3 84 57.1
PSO210G7245 Papaver somniferum HOM05D006721 ORTHO05D000476 2.5e-21 106.3 89 58.4
PSO832G0589 Papaver somniferum HOM05D006721 ORTHO05D000476 2.5e-21 106.3 89 58.4
Sc15g0002500 Simmondsia chinensis HOM05D006721 ORTHO05D000476 2.5e-21 106.3 83 59.0
Actinidia34741 Actinidia chinensis HOM05D006721 ORTHO05D000476 4.3e-21 105.5 87 59.8
Thhalv10023143m.g Eutrema salsugineum HOM05D006721 ORTHO05D000476 4.3e-21 105.5 82 58.5
Lsat_1_v5_gn_2_107641 Lactuca sativa HOM05D006721 ORTHO05D000476 5.6e-21 105.1 84 58.3
Manes.09G149900 Manihot esculenta HOM05D006721 ORTHO05D000476 5.6e-21 105.1 84 57.1
Sabra19G0016300 Salix brachista HOM05D006721 ORTHO05D000476 5.6e-21 105.1 84 59.5
Sabra19G0026800 Salix brachista HOM05D006721 ORTHO05D000476 5.6e-21 105.1 84 59.5
Sp3g27300 Schrenkiella parvula HOM05D006721 ORTHO05D000476 5.6e-21 105.1 82 58.5
AT2G14045 Arabidopsis thaliana HOM05D006721 ORTHO05D000476 7.3e-21 104.8 82 58.5
Nitab4.5_0002651g0060 Nicotiana tabacum HOM05D006721 ORTHO05D000476 7.3e-21 104.8 96 56.2
BcaC01g03109 Brassica carinata HOM05D006721 ORTHO05D000476 9.5e-21 104.4 81 59.3
A03p45120 Brassica napus HOM05D006721 ORTHO05D000476 9.5e-21 104.4 81 59.3
C03p55970 Brassica napus HOM05D006721 ORTHO05D000476 9.5e-21 104.4 81 59.3
BolC3t17881H Brassica oleracea HOM05D006721 ORTHO05D000476 9.5e-21 104.4 81 59.3
BraA03t13647Z Brassica rapa HOM05D006721 ORTHO05D000476 9.5e-21 104.4 81 59.3
Cpa.g.sc162.11 Carica papaya HOM05D006721 ORTHO05D000476 9.5e-21 104.4 84 56.0
SGA_v2.0_scaffold90G27702 Striga asiatica HOM05D006721 ORTHO05D000476 9.5e-21 104.4 87 55.2
CSS0047325 Camellia sinensis var. sinensis HOM05D006721 ORTHO05D000476 1.2e-20 104.0 84 58.3
CAN.G186.72 Capsicum annuum HOM05D006721 ORTHO05D000476 2.1e-20 103.2 87 56.3
CARHR104660 Cardamine hirsuta HOM05D006721 ORTHO05D000476 2.8e-20 102.8 82 58.5
CANSAT54G3036 Cannabis sativa HOM05D006721 ORTHO05D000476 3.6e-20 102.4 84 52.4
Gohir.D12G180151 Gossypium hirsutum HOM05D006721 ORTHO05D000476 3.6e-20 102.4 84 57.1
MD12G1244800 Malus domestica HOM05D006721 ORTHO05D000476 3.6e-20 102.4 84 58.3
TWI56G0396 Tripterygium wilfordii HOM05D006721 ORTHO05D000476 6.2e-20 101.7 85 54.1
Gorai.008G193300 Gossypium raimondii HOM05D006721 ORTHO05D000476 8.1e-20 101.3 84 54.8
RcHm_v2.0_Chr3g0450141 Rosa chinensis HOM05D006721 ORTHO05D000476 8.1e-20 101.3 84 58.3
GSVIVG01014622001 Vitis vinifera HOM05D006721 ORTHO05D000476 4.0e-19 99.0 84 54.8
FvH4_6g02371 Fragaria vesca HOM05D006721 ORTHO05D000476 6.8e-19 98.2 84 56.0
FAN02G4370 Fragaria x ananassa HOM05D006721 ORTHO05D000476 6.8e-19 98.2 84 56.0
FAN05G3615 Fragaria x ananassa HOM05D004756 ORTHO05D005793 6.8e-19 98.2 84 56.0
FAN05G5208 Fragaria x ananassa HOM05D006721 ORTHO05D000476 6.8e-19 98.2 84 56.0
FAN14G0694 Fragaria x ananassa HOM05D004756 ORTHO05D005793 6.8e-19 98.2 84 56.0
FAN14G4094 Fragaria x ananassa HOM05D004756 ORTHO05D005793 6.8e-19 98.2 84 56.0
Glyma.03G251900 Glycine max HOM05D006721 ORTHO05D000476 3.4e-18 95.9 84 50.0
Lj1g0023872 Lotus japonicus HOM05D006721 ORTHO05D000476 4.4e-18 95.5 84 51.2
AL3G45710 Arabidopsis lyrata HOM05D006721 ORTHO05D000476 5.8e-18 95.1 93 50.5
Phvul.006G106600 Phaseolus vulgaris HOM05D006721 ORTHO05D000476 7.5e-18 94.7 84 50.0
GSVIVG01015127001 Vitis vinifera HOM05D006721 ORTHO05D000476 1.3e-17 94.0 80 55.0
MCO10G233 Micromonas commoda HOM05D006721 ORTHO05D000476 1.7e-17 93.6 79 60.8
Lalb_Chr04g0262001 Lupinus albus HOM05D006721 ORTHO05D000476 2.2e-17 93.2 84 50.0
Medtr7g116300 Medicago truncatula HOM05D006721 ORTHO05D000476 2.2e-17 93.2 84 48.8
TPR.G6950 Trifolium pratense HOM05D006721 ORTHO05D000476 2.2e-17 93.2 84 48.8
Psat3g006080 Pisum sativum HOM05D006721 ORTHO05D000476 3.7e-17 92.4 84 48.8
CBR_g51472 Chara braunii HOM05D006721 ORTHO05D000476 4.9e-17 92.0 87 54.0
Duzib128G0372 Durio zibethinus HOM05D006721 ORTHO05D000476 2.4e-16 89.7 59 72.9
Ca_09468_v3 Cicer arietinum L. HOM05D006721 ORTHO05D000476 1.2e-15 87.4 76 53.9
Rhsim09G0138600 Rhododendron simsii HOM05D006721 ORTHO05D000476 1.6e-15 87.0 125 40.8
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 3.3e-13 79.3 85 47.1
PRCOL_00003504 Prasinoderma coloniale HOM05D006721 ORTHO05D000476 7.3e-13 78.2 74 55.4
Cre02.g105950 Chlamydomonas reinhardtii HOM05D006721 ORTHO05D000476 2.1e-12 76.6 85 48.2
BraA09t38027Z Brassica rapa HOM05D006721 ORTHO05D000476 1.2e-10 70.9 80 41.2
BraA10t43135Z Brassica rapa HOM05D006721 ORTHO05D000476 1.2e-10 70.9 80 41.2
BraA06t26268Z Brassica rapa HOM05D006721 ORTHO05D000476 1.5e-10 70.5 74 43.2
A07p07050 Brassica napus HOM05D006721 ORTHO05D000476 2.0e-10 70.1 79 41.8
MELO3C004419.2 Cucumis melo HOM05D006721 ORTHO05D000476 4.4e-10 68.9 65 44.6
ClCG02G016980 Citrullus lanatus HOM05D006721 ORTHO05D000476 9.3e-08 61.2 58 46.6
FAN09G4219 Fragaria x ananassa HOM05D006721 ORTHO05D000476 3.5e-07 59.3 74 43.2
A09p24350 Brassica napus HOM05D006721 ORTHO05D000476 7.8e-07 58.2 58 41.4
A01p30750 Brassica napus HOM05D001035 ORTHO05D000476 3.9e-06 55.8 58 39.7
C07p11900 Brassica napus HOM05D006721 ORTHO05D000476 3.9e-06 55.8 69 46.4
Zm00001eb112450 Zea mays HOM05D006721 ORTHO05D000476 8.7e-06 54.7 49 44.9


User provided reference genes

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