Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 6.1e-285 983.4 475 100.0
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 5.0e-154 548.5 398 63.3
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 4.4e-150 535.4 419 60.4
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 2.0e-147 526.6 428 59.8
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 3.5e-147 525.8 428 58.4
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 3.8e-146 522.3 398 60.1
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 1.1e-145 520.8 406 59.1
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 5.6e-145 518.5 418 58.1
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 7.3e-145 518.1 424 56.8
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 2.1e-144 516.5 406 60.8
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 3.6e-144 515.8 417 56.4
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 4.7e-144 515.4 441 55.8
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 4.7e-144 515.4 403 60.5
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 6.1e-144 515.0 407 58.5
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 6.1e-144 515.0 420 57.6
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 8.0e-144 514.6 424 56.8
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 1.0e-143 514.2 407 58.7
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 1.4e-143 513.8 419 56.3
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 2.3e-143 513.1 409 58.2
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 2.3e-143 513.1 409 58.2
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 3.0e-143 512.7 444 53.6
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 5.2e-143 511.9 441 55.3
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 6.8e-143 511.5 407 58.2
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 1.2e-142 510.8 411 57.7
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 1.5e-142 510.4 424 55.9
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 1.5e-142 510.4 402 58.5
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 2.6e-142 509.6 414 57.0
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 5.7e-142 508.4 402 58.2
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 7.5e-142 508.1 420 57.6
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 7.5e-142 508.1 408 56.9
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 9.8e-142 507.7 418 57.9
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 9.8e-142 507.7 402 58.7
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 1.3e-141 507.3 429 56.6
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 2.2e-141 506.5 409 57.9
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 2.9e-141 506.1 411 57.7
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 3.7e-141 505.8 407 58.0
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 4.9e-141 505.4 400 59.2
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 6.4e-141 505.0 429 56.4
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 1.4e-140 503.8 408 58.8
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 1.4e-140 503.8 444 55.2
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 9.2e-140 501.1 403 57.1
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 9.2e-140 501.1 426 55.9
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 1.6e-139 500.4 412 57.3
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 2.7e-139 499.6 445 56.9
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 3.5e-139 499.2 418 56.5
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 3.5e-139 499.2 407 58.0
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 3.5e-139 499.2 453 53.0
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 1.0e-138 497.7 400 58.8
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 5.0e-138 495.4 421 55.6
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 5.0e-138 495.4 413 55.9
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 6.6e-138 495.0 405 57.5
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 3.3e-137 492.7 409 56.2
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 3.3e-137 492.7 399 58.4
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 4.3e-137 492.3 420 56.0
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 5.6e-137 491.9 427 55.5
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.2e-136 490.7 392 57.9
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 2.8e-136 489.6 447 54.1
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 4.7e-136 488.8 424 54.2
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 6.2e-136 488.4 426 54.7
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 2.3e-135 486.5 396 57.1
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 2.3e-135 486.5 394 57.1
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 3.1e-135 486.1 414 56.5
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 5.2e-135 485.3 402 57.0
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 6.8e-135 485.0 429 53.6
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 1.2e-134 484.2 393 56.7
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 1.5e-134 483.8 394 57.4
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 2.0e-134 483.4 433 53.8
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 3.4e-134 482.6 433 53.6
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 1.3e-133 480.7 420 54.0
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 1.9e-132 476.9 413 55.4
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 2.7e-131 473.0 448 52.9
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 8.6e-130 468.0 396 53.8
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 7.3e-129 464.9 407 54.8
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 2.2e-125 453.4 412 53.6
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 4.1e-124 449.1 408 53.2
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.6e-123 447.2 402 53.2
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 5.8e-118 428.7 394 53.6
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 2.2e-117 426.8 317 62.5
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 4.9e-117 425.6 407 51.4
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 1.2e-115 421.0 413 52.1
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 2.7e-115 419.9 425 49.9
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 6.9e-111 405.2 346 56.4
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 1.2e-110 404.4 389 49.9
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 1.3e-109 401.0 430 47.0
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 1.7e-109 400.6 348 54.6
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 9.3e-108 394.8 324 58.0
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 6.0e-107 392.1 407 48.4
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 1.3e-104 384.4 351 54.1
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 1.6e-104 384.0 342 53.8
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 1.1e-103 381.3 319 56.4
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.6e-99 367.5 385 49.1
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.5e-97 360.9 394 48.2
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 6.9e-95 352.1 380 48.7
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 5.8e-86 322.4 226 64.2
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 8.7e-82 308.5 239 59.4
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 1.8e-66 257.7 399 36.1
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 1.1e-63 248.4 276 46.4
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 1.7e-53 214.5 195 49.7
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 2.9e-53 213.8 217 51.6
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 8.0e-43 179.1 388 30.9
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.2e-41 175.3 130 64.6
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.2e-41 175.3 130 64.6
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 1.6e-38 164.9 157 49.7
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 3.5e-30 137.1 159 44.0
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 1.8e-26 124.8 129 45.7
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.3e-20 104.0 170 38.8
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.3e-20 104.0 170 38.8
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 5.6e-20 103.2 63 71.4
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 6.2e-19 99.8 125 40.8
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 3.1e-18 97.4 90 52.2
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 8.9e-18 95.9 202 30.2
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 3.7e-16 90.5 401 24.9
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 3.2e-15 87.4 222 28.8
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 5.4e-15 86.7 73 56.2
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 1.3e-13 82.0 200 32.0
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 9.2e-07 59.3 77 42.9


User provided reference genes

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