Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 4.6e-118 427.9 220 100.0
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 1.4e-29 134.0 135 54.8
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 7.5e-28 128.3 106 60.4
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 4.5e-25 119.0 133 44.4
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 2.9e-24 116.3 121 48.8
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 1.1e-23 114.4 116 52.6
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 1.1e-23 114.4 102 59.8
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 1.9e-23 113.6 117 47.9
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 2.5e-23 113.2 107 52.3
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 3.3e-23 112.8 106 51.9
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 5.6e-23 112.1 119 47.9
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 1.2e-22 110.9 104 51.9
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 1.6e-22 110.5 127 45.7
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 1.6e-22 110.5 127 45.7
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 2.1e-22 110.2 110 50.9
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 2.8e-22 109.8 103 50.5
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 2.8e-22 109.8 109 50.5
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 2.8e-22 109.8 101 53.5
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 2.8e-22 109.8 119 49.6
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 2.8e-22 109.8 114 47.4
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 2.8e-22 109.8 116 48.3
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 3.6e-22 109.4 110 47.3
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 3.6e-22 109.4 110 47.3
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 4.7e-22 109.0 104 49.0
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 4.7e-22 109.0 104 49.0
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 4.7e-22 109.0 104 49.0
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 4.7e-22 109.0 104 49.0
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 4.7e-22 109.0 104 49.0
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 4.7e-22 109.0 110 47.3
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 4.7e-22 109.0 113 46.9
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 6.1e-22 108.6 102 51.0
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 8.0e-22 108.2 110 47.3
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 8.0e-22 108.2 108 50.9
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 8.0e-22 108.2 110 47.3
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 1.0e-21 107.8 109 46.8
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 1.0e-21 107.8 110 49.1
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 1.0e-21 107.8 108 50.9
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 1.4e-21 107.5 104 48.1
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 1.4e-21 107.5 110 46.4
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 1.4e-21 107.5 110 46.4
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 1.4e-21 107.5 110 46.4
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 1.4e-21 107.5 110 49.1
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 1.4e-21 107.5 117 47.0
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 1.4e-21 107.5 113 47.8
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 1.4e-21 107.5 111 49.5
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 1.8e-21 107.1 106 49.1
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 2.3e-21 106.7 103 51.5
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 3.0e-21 106.3 103 48.5
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 3.0e-21 106.3 104 47.1
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 3.0e-21 106.3 104 47.1
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 4.0e-21 105.9 130 44.6
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 4.0e-21 105.9 105 50.5
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 5.2e-21 105.5 101 48.5
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 5.2e-21 105.5 103 48.5
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 5.2e-21 105.5 104 49.0
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 5.2e-21 105.5 101 51.5
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 6.8e-21 105.1 131 45.0
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 6.8e-21 105.1 108 44.4
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 8.9e-21 104.8 131 45.0
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 8.9e-21 104.8 119 47.1
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 8.9e-21 104.8 121 43.0
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 1.2e-20 104.4 114 46.5
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 1.2e-20 104.4 106 49.1
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 1.5e-20 104.0 112 47.3
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 2.0e-20 103.6 110 47.3
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 2.6e-20 103.2 123 42.3
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 2.6e-20 103.2 144 41.7
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 4.4e-20 102.4 101 49.5
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 5.7e-20 102.1 107 45.8
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 5.7e-20 102.1 107 46.7
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 5.7e-20 102.1 129 44.2
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 5.7e-20 102.1 107 48.6
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 7.5e-20 101.7 106 46.2
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 7.5e-20 101.7 107 46.7
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 9.8e-20 101.3 108 45.4
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 1.7e-19 100.5 101 48.5
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 1.7e-19 100.5 106 45.3
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 1.7e-19 100.5 106 46.2
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 2.9e-19 99.8 106 47.2
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 3.7e-19 99.4 104 46.2
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 3.7e-19 99.4 97 50.5
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 4.9e-19 99.0 107 46.7
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 4.9e-19 99.0 106 44.3
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 4.9e-19 99.0 101 49.5
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 6.4e-19 98.6 101 47.5
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 1.1e-18 97.8 90 51.1
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 1.1e-18 97.8 101 48.5
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 1.8e-18 97.1 110 43.6
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 2.4e-18 96.7 118 47.5
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 4.1e-18 95.9 89 52.8
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 4.1e-18 95.9 88 53.4
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 5.4e-18 95.5 105 48.6
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 5.4e-18 95.5 108 43.5
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 7.0e-18 95.1 101 45.5
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 1.2e-17 94.4 114 43.0
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 1.2e-17 94.4 106 43.4
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 2.7e-17 93.2 89 48.3
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 5.9e-17 92.0 88 52.3
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 1.0e-16 91.3 85 51.8
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 3.9e-16 89.4 116 43.1
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 3.3e-15 86.3 88 47.7
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 1.6e-14 84.0 106 42.5
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.0e-13 81.3 110 41.8
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 4.4e-12 75.9 103 40.8
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 1.3e-11 74.3 123 37.4
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 1.6e-09 67.4 88 35.2


User provided reference genes

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