Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 8.1e-106 387.1 199 100.0
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 1.3e-55 220.3 199 57.8
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 2.6e-51 206.1 183 57.4
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 2.2e-50 203.0 172 57.0
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 1.8e-49 199.9 170 59.4
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 2.4e-49 199.5 170 60.0
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 2.4e-49 199.5 178 59.0
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 3.1e-49 199.1 176 56.2
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 4.1e-49 198.7 173 57.8
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 4.1e-49 198.7 173 57.8
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 4.1e-49 198.7 173 57.8
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 4.1e-49 198.7 182 56.0
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 5.3e-49 198.4 175 56.0
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 5.3e-49 198.4 188 52.7
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 7.0e-49 198.0 175 56.6
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 7.0e-49 198.0 177 57.1
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 9.1e-49 197.6 176 56.2
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 9.1e-49 197.6 179 55.9
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 1.2e-48 197.2 178 55.6
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 1.6e-48 196.8 177 56.5
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 2.0e-48 196.4 175 57.7
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 3.5e-48 195.7 172 57.6
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 3.5e-48 195.7 177 56.5
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 5.9e-48 194.9 175 57.1
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 1.0e-47 194.1 179 54.2
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.0e-47 194.1 179 54.2
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.0e-47 194.1 179 54.2
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.3e-47 193.7 179 54.2
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 1.7e-47 193.4 173 55.5
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 1.7e-47 193.4 177 55.9
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 2.2e-47 193.0 179 54.2
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 2.9e-47 192.6 180 54.4
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 2.9e-47 192.6 177 54.8
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 3.8e-47 192.2 178 53.4
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 3.8e-47 192.2 176 56.2
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 3.8e-47 192.2 173 55.5
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 3.8e-47 192.2 173 55.5
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 5.0e-47 191.8 177 57.1
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 5.0e-47 191.8 179 53.6
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 5.0e-47 191.8 178 55.1
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 5.0e-47 191.8 173 55.5
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 6.5e-47 191.4 173 57.8
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 6.5e-47 191.4 176 56.2
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 6.5e-47 191.4 176 56.2
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 6.5e-47 191.4 176 56.2
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 6.5e-47 191.4 188 53.2
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 6.5e-47 191.4 176 55.1
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 8.5e-47 191.0 177 53.7
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 1.9e-46 189.9 179 55.3
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 2.5e-46 189.5 176 54.5
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 2.5e-46 189.5 176 56.2
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 2.5e-46 189.5 176 56.2
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 2.5e-46 189.5 176 55.7
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 3.2e-46 189.1 176 56.2
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 4.2e-46 188.7 179 53.6
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 5.5e-46 188.3 176 55.1
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 7.2e-46 188.0 181 54.1
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 7.2e-46 188.0 181 54.1
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 9.4e-46 187.6 177 52.0
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 9.4e-46 187.6 191 51.8
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 9.4e-46 187.6 174 54.6
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 9.4e-46 187.6 179 53.6
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 9.4e-46 187.6 186 53.2
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 9.4e-46 187.6 186 53.2
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 1.2e-45 187.2 176 55.1
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 1.2e-45 187.2 181 54.1
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 1.2e-45 187.2 165 56.4
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 1.6e-45 186.8 193 50.8
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 1.6e-45 186.8 180 53.3
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 1.6e-45 186.8 180 53.3
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 2.1e-45 186.4 176 54.0
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 2.1e-45 186.4 175 54.9
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 6.1e-45 184.9 173 53.8
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 1.4e-44 183.7 170 55.9
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 3.0e-44 182.6 215 50.2
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 6.7e-44 181.4 181 52.5
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 8.8e-44 181.0 147 57.8
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 3.3e-43 179.1 181 52.5
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 1.7e-42 176.8 186 51.1
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 2.2e-42 176.4 177 54.2
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 4.8e-42 175.3 186 51.6
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 8.2e-42 174.5 184 51.6
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 8.2e-42 174.5 184 51.6
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 8.2e-42 174.5 199 48.2
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 1.1e-41 174.1 187 51.3
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 1.1e-41 174.1 187 51.3
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 1.1e-41 174.1 187 51.3
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 1.4e-41 173.7 196 50.0
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 1.4e-41 173.7 172 51.2
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 1.8e-41 173.3 138 62.3
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 2.4e-41 172.9 187 51.9
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 7.0e-41 171.4 188 50.0
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 1.2e-40 170.6 178 55.1
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.6e-40 170.2 170 50.6
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 1.6e-40 170.2 191 49.2
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 2.0e-40 169.9 190 48.9
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 2.0e-40 169.9 190 48.9
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 2.7e-40 169.5 203 45.8
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 3.5e-40 169.1 152 55.3
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 1.0e-39 167.5 153 54.2
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 7.2e-38 161.4 196 48.0
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 1.6e-37 160.2 189 48.1
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 4.1e-33 145.6 172 47.7
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 2.5e-30 136.3 143 50.3
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 2.6e-27 126.3 103 58.3
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 1.3e-26 124.0 103 57.3
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.1e-25 120.9 170 41.8
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 1.1e-22 110.9 110 51.8
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 2.8e-21 106.3 96 56.2
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 5.6e-14 82.0 162 32.7
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 5.2e-12 75.5 53 64.2
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.7e-10 70.5 61 54.1
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 6.0e-08 62.0 125 32.8


User provided reference genes

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