Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0012s0041 Marchantia polymorpha HOM05D001200 ORTHO05D002731 2.2e-48 195.3 99 100.0
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 2.1e-09 65.9 59 61.0
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 2.3e-08 62.4 57 59.6
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 2.3e-08 62.4 57 59.6
HanXRQChr00c0196g0572481 Helianthus annuus HOM05D001200 ORTHO05D002731 2.3e-08 62.4 57 59.6
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 2.3e-08 62.4 57 59.6
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 2.3e-08 62.4 57 59.6
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 2.3e-08 62.4 57 59.6
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 2.3e-08 62.4 57 59.6
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 2.3e-08 62.4 57 59.6
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 2.3e-08 62.4 68 54.4
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 3.9e-08 61.6 57 57.9
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 6.6e-08 60.8 65 55.4
HanXRQChr00c0328g0573601 Helianthus annuus HOM05D001200 ORTHO05D002731 6.6e-08 60.8 44 68.2
Lsat_1_v5_gn_1_14200 Lactuca sativa HOM05D001200 ORTHO05D002731 6.6e-08 60.8 44 68.2
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 6.6e-08 60.8 59 54.2
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 8.6e-08 60.5 57 57.9
Lalb_Chr23g0274791 Lupinus albus HOM05D001200 ORTHO05D002731 8.6e-08 60.5 59 57.6
MBI10_g47590_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D002731 8.6e-08 60.5 65 50.8
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 8.6e-08 60.5 59 55.9
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 8.6e-08 60.5 59 55.9
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 8.6e-08 60.5 59 55.9
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 8.6e-08 60.5 59 55.9
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 1.1e-07 60.1 57 57.9
Medtr4g086110 Medicago truncatula HOM05D001200 ORTHO05D002731 1.1e-07 60.1 46 60.9
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 1.1e-07 60.1 57 57.9
arahy.Tifrunner.gnm1.ann1.2QK9Z7 Arachis hypogaea HOM05D001200 ORTHO05D002731 1.5e-07 59.7 59 55.9
arahy.Tifrunner.gnm1.ann1.FIPJ9G Arachis hypogaea HOM05D001200 ORTHO05D002731 1.5e-07 59.7 59 55.9
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 1.5e-07 59.7 57 57.9
C06p42250 Brassica napus HOM05D001200 ORTHO05D002731 1.5e-07 59.7 57 57.9
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 1.5e-07 59.7 57 57.9
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 1.5e-07 59.7 57 57.9
BolSC29t60621H Brassica oleracea HOM05D001200 ORTHO05D002731 1.5e-07 59.7 57 57.9
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 1.5e-07 59.7 57 57.9
BolSC46t60960H Brassica oleracea HOM05D001200 ORTHO05D002731 1.5e-07 59.7 57 57.9
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 1.5e-07 59.7 57 57.9
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 1.5e-07 59.7 57 57.9
Ciclev10013969m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.5e-07 59.7 57 54.4
Ciclev10013974m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.5e-07 59.7 57 54.4
Ciclev10027650m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.5e-07 59.7 57 54.4
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 1.5e-07 59.7 57 57.9
Medtr7g075220 Medicago truncatula HOM05D000504 ORTHO05D002731 1.5e-07 59.7 59 55.9
BolC7t43854H Brassica oleracea HOM05D001200 ORTHO05D002731 2.5e-07 58.9 63 55.6
Gohir.A02G134201 Gossypium hirsutum HOM05D001200 ORTHO05D010401 2.5e-07 58.9 44 65.9
Gohir.A13G109925 Gossypium hirsutum HOM05D001200 ORTHO05D002731 2.5e-07 58.9 58 56.9
Lalb_Chr07g0191751 Lupinus albus HOM05D001200 ORTHO05D002731 2.5e-07 58.9 46 65.2
PGSC0003DMG400020539 Solanum tuberosum HOM05D001200 ORTHO05D002731 2.5e-07 58.9 57 54.4
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 2.5e-07 58.9 57 54.4
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 3.3e-07 58.5 59 54.2
BolSC35t60702H Brassica oleracea HOM05D001200 ORTHO05D002731 4.3e-07 58.2 44 65.9
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 4.3e-07 58.2 57 56.1
Medtr2g102090 Medicago truncatula HOM05D001200 ORTHO05D002731 4.3e-07 58.2 88 40.9
Phvul.002G050301 Phaseolus vulgaris HOM05D001200 ORTHO05D002731 7.3e-07 57.4 59 52.5
BolC2t10611H Brassica oleracea HOM05D001200 ORTHO05D002731 1.2e-06 56.6 57 56.1
Ciclev10006660m.g Citrus clementina HOM05D001200 ORTHO05D002731 2.1e-06 55.8 38 73.7
HanXRQChr06g0183001 Helianthus annuus HOM05D001200 ORTHO05D002731 2.1e-06 55.8 71 46.5
Ciclev10027631m.g Citrus clementina HOM05D001200 ORTHO05D002731 2.8e-06 55.5 39 66.7
Medtr5g021300 Medicago truncatula HOM05D001200 ORTHO05D002731 3.6e-06 55.1 91 38.5
Medtr5g032430 Medicago truncatula HOM05D001200 ORTHO05D002731 3.6e-06 55.1 43 58.1
Medtr3g008330 Medicago truncatula HOM05D001200 ORTHO05D002731 4.7e-06 54.7 43 58.1
Oeu012765.1 Olea europaea HOM05D001200 ORTHO05D002731 4.7e-06 54.7 45 57.8
GSVIVG01004976001 Vitis vinifera HOM05D001200 ORTHO05D010401 4.7e-06 54.7 39 66.7
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 6.2e-06 54.3 38 68.4


User provided reference genes

Program Settings